Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g02191 | ATGTCAAATGATGAAGGCAAAAATGTGTACCAGCAGTATGATCCATTCCAATACAACCAGTTGGATATGAACCGTTCGATCTTCCATCAACAAGCGGCGACGTTGGATCCTGCTTTGATGAGCTTCACTAACTTCTTCGATACCTCGTTGGATTACAACAGCCTGTCGAAGGCGTTCGACGTGTCGTGCTGTTCATCCGAAGTCATTTCTGCAGTGGACGACAGGTCGAAATCAAAGAAGGCTTCGACGACCACCCCAAATTCTTCAGTGTCGTCGTCGTCTAATGAAGCTGTAGTTGAAGAAGATTCAGTCAAGAGCAACAAAGAGGACATAAAAGGGTGCGAGAATAAAGATGAAGAAAAGTCTAAGAAACAGAACAGCATAACAAAAAAGAAAGAGAAACGGCAGAGGGAGCCCCGTTTTGCTTTCTTGACTAAGAGTGAGATTGATCACCTTGAAGATGGTTATAGATGGAGAAAATATGGTCAGAAAGCAGTTAAAAATAGTCCTTACCCAAGAAGCTACTATAGATGCACCAGCCAAAAATGTGTAGTGAAAAAACGAGTTGAAAGATCATATCAAGATCCATCTGTAGTGATTACTACATATGAAGGCCAACACAACCACCATTGTCCAGCTACACTCCGAGGCCATTCTGCAGGGATCATGTCGTCTCCATTCTATGCATCAGCATCAACATCGGTAACGGCAGCCTCGTCGGGGCCTACGCTTCCACAAGAACTCTTCTCACATTTGTTACCGACAAATAACTGCCAAACCGACCCGGCCTCGATGATGTACCAAAATCTAAGCCTTCAACAACACCTTCAAATGCCTGATCATTATGGTTTGTTGCAAGATTTGTTCACTCAAAAATAG | 879 | 43.46 | MSNDEGKNVYQQYDPFQYNQLDMNRSIFHQQAATLDPALMSFTNFFDTSLDYNSLSKAFDVSCCSSEVISAVDDRSKSKKASTTTPNSSVSSSSNEAVVEEDSVKSNKEDIKGCENKDEEKSKKQNSITKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYASASTSVTAASSGPTLPQELFSHLLPTNNCQTDPASMMYQNLSLQQHLQMPDHYGLLQDLFTQK | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 39506007 | 39507831 | + | ClCG09G022500.2 | Cla09g02191 | 281611 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g02191 | 292 | PANTHER | WRKY TRANSCRIPTION FACTOR 71-RELATED | 14 | 290 | - | - | |
Cla09g02191 | 292 | MobiDBLite | consensus disorder prediction | 74 | 139 | - | - | |
Cla09g02191 | 292 | SMART | WRKY_cls | 152 | 211 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g02191 | 292 | Gene3D | WRKY domain | 136 | 213 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g02191 | 292 | ProSiteProfiles | WRKY domain profile. | 147 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g02191 | 292 | MobiDBLite | consensus disorder prediction | 81 | 100 | - | - | |
Cla09g02191 | 292 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 14 | 290 | IPR044810 | GO:0003700 | |
Cla09g02191 | 292 | MobiDBLite | consensus disorder prediction | 101 | 139 | - | - | |
Cla09g02191 | 292 | Pfam | WRKY DNA -binding domain | 153 | 209 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g02191 | 292 | SUPERFAMILY | WRKY DNA-binding domain | 145 | 212 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02377 | Cla-Chr1:37466720 | Cla09g02191 | Cla-Chr9:39506007 | 8.49E-59 | dispersed | |
Cla09g00458 | Cla-Chr9:4387274 | Cla09g02191 | Cla-Chr9:39506007 | 3.23E-41 | dispersed | |
Cla09g02191 | Cla-Chr9:39506007 | Cla10g01103 | Cla-Chr10:25306121 | 1.60E-40 | dispersed | |
Cla10g01231 | Cla-Chr10:27030352 | Cla09g02191 | Cla-Chr9:39506007 | 1.12E-20 | dispersed | |
Cla08g01030 | Cla-Chr8:23025947 | Cla09g02191 | Cla-Chr9:39506007 | 3.24E-48 | transposed | |
Cla02g01802 | Cla-Chr2:33057673 | Cla09g02191 | Cla-Chr9:39506007 | 7.81E-68 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61794 | PF03106 | WRKY | 5.40E-25 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g02191 | - | - | csv:101211248 | 508.064 |