Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g02204 | ATGGCGTCTTCGTCTTTAGGTTTCATCTTTGTTCTTTGTGCTGTTGCTTCCATCGTCGCCCACGTGATTGTTTTGTCTCAAGCTCAGAATTCAACTCTACCCCCCACCGATCCTGATCAAGCAAGAGCTCTGAATTCCATATTTCGACAATGGCGTATATCGGCTCCATCAGGGGCGTGGAATATAAGCGGGAATCTGTGCAGTGGGAGAGCTGTCGACACTACAACCCCCATCGATAGTAATGGAAACCTCAATCCTCTTATAAAATGTGATTGCTCAGCCAACAATGGTGCTACTTGCCTCATTACTCAACTGCACGTTTATGCGATAAATGTTGTTGGTGTACTCCCACCAGAGCTATGGACATTAACTTCCCTCACCTATCTGAAGCTGGATCAAAATTTCTTGACAGGAACATTATCTGCATCTGTTGGCAATCTCACAGAATTGCGAACCTTGAGCCTGGGCATTAATGCATTATCAGGGGAACTGCCGAAGGAACTTGGATCTCTTTCTAAACTAGAAGTATTGGCATTCGGGTCCAACAATTTCTCTGGTCCCTTACCGTCAGAGCTTGGAAGTCTTTCTATGTTAAGGGAGCTATACATTGATAGCTCTGGAGTTTCTGGTGGTATTCCTCCATCATTTTCAAGTCTGAGAAACTTGCAGACAGTATGGGCATCAGACAATGAATTCACTGGCAGAATACCTGATTTCATCGGGAGTTGGACAAGGCTCACATCTCTGAGGTTTCAAGGAAACTCTTTTACAGGTCCTATACCATCGACGTTTTCAAACTTGACATCTCTGACTGAGTTGAGAATAGGTGATTTATCCAATGGGAGCTCTTCTCTGGCATTCGTCAGTAATATGACATCTCTAACTATCCTGGTGTTGAGAAATAATAATATGACTGGTTCAATTCCATCCGACATTGGAGGATTTCGTAGACTTACCCAGCTGGACTTGAGCTTCAACAACTTGACAGGAGAGATTCCAAGCTCGCTTTTCAGTTTGAGTTCACTGTCACACTTGATTCTTGGAAATAATAAGTTAAATGGGACCCTACCTACACAGAAGAGTGCATCACTTCTAAATATAGACTTGTCATATAACGATTTATCAGGGAGCTTTCCTGCTTGGATCAACGAGCAAAACTTACAACTAAATTTAGTCGCCAACAATTTCACAATTGACAGTGCTAGTATCAGTGGTTTGCCTTCTGGATTGAATTGTCTTCAACGCAACTTTCCTTGTAATCGAGGTCGTCCAATATATTCTGATTTTGGGATCAAGTGTGGAGGTCCACAGATCAGAAGTTCATCAGGGATTTTGTTTGAAAGAGAAAATGAGACTCTCGGTCCTGCTACGTACTTTGTTACTGAGTCACAAAGGTGGGCCGTTAGTAATACTGGATACTTTACTGGGACCAACGATCCTCAATACACAGCCAATACGTTGTCTCAATTCCCAAACACCCTTGACACAGAACTTTTCCAGACACAGCGACTATCTGCTTCATCATTGAGATACTATGGACTAGGGCTTGAGAATGGCAACTACACTGTGAACCTTCATTTTGCAGAGCTAGCTTTCCCAGATTCAAATACATGGCAAAGCCGTGGGAGGCGTCTCTTTGATATATATATACAGGGAAATCGTGTGTTACAGAATTTTGATATTAGAAAGGAGGCAGGTGGGTCTTTCCTTGCTGTCAGAAAGAATTTTACGGCTGAAGTTACAGAAAACTTCCTGGAAATTCATCTCTTTTGGGCGGGGAAAGGTACTTGCTGCATACCTAAACAGGGTGATTTTGGACCCGCTGTTTCAGCCATCAGTGCTACCCCAGATTTTGTACCAACTGTCAGTAACGTTCCTCCAAGTACTAAGGAGAATAGAACAGGCCTAATCGTAGGGCTCGTTGTTGGTTTAGGATCTGTTTTCTTTCTGATTATTGGCACAGTTTTCCTTGTTGTTCAGAGAAGGAAAACGCGTCGCGCCTATGAAGATGAAGAGCTCCTAGGAATAGACACTAGACCGTACACTTTTAGTTTTTCTGAATTAAGGAGTGCTACAAATGACTTTAATTCATCCAACAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACATTAAATGATGGAAGAGTGGTTGCTGTGAAGCAACTTTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAATATCTGCAGTGCAACATCGTAACCTTGTGAAATTATATGGATGTTGCATTGAGGCCGATAAACGTCTCCTTGTTTATGAGTTTCTTGAAAACAAGAGTCTTGACCAAGCATTATTTGGACAAAAACATTTGATTATTGATTGGCCAACACGTTTTGAGATATGCGTGGGTGTAGCAAGGGGCCTCACTTACCTTCATGAGGAATCGAGGCTTCGCATAGTGCACAGAGATGTTAAGGCCAGTAACATCCTGCTTGATGGTAATCTGATTCCCAAAATTTCAGATTTTGGCTTAGCCAAACTTTATGATGACAAAAAGACTCATATAAGCACCCGTGTTGCTGGGACAATTGGTTATCTTGCACCTGAGTATGCCATGCGTGGCCACCTTACGGAGAAGGCTGATGTCTTTGGATTTGGCGTTGTGGCTCTTGAAATTGTTAGTGGAAGGCCAAATTCAGACCCAAGCTTAGAGCAAGACAAAGTATATCTTCTCGAATGGGCATGGTACCTCCACGAAAACAACTGTGAACTTGAGATGGTGGATTCTGAATTATCAGAGTTCAGTAAGGAGGAAGTAAAAAGGGTGATCGGTGTAGCTCTTCTGTGTACTCAAACATCTCCAGCTCTTCGGCCATCGATGTCCCGTGTGGTGGCAATGCTGACTGGAGACATTGAAGTGGCCGCTGTAACTTCCAAACCAGGATACCTGACAGATTGGAAATTTGATGACATTACAAGCTTTATAGATACTCCATCAACTGAAGAACCTGATACTGGCCGTTATGCATCGACAAGTTCAAGTATCGTTGATACACATCGCTCACCAGCCAATGCTTCTGAACCAATGCTTCGTGGATTATTAGGAGAGGGTAGGTGA | 3105 | 43.12 | MASSSLGFIFVLCAVASIVAHVIVLSQAQNSTLPPTDPDQARALNSIFRQWRISAPSGAWNISGNLCSGRAVDTTTPIDSNGNLNPLIKCDCSANNGATCLITQLHVYAINVVGVLPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTELRTLSLGINALSGELPKELGSLSKLEVLAFGSNNFSGPLPSELGSLSMLRELYIDSSGVSGGIPPSFSSLRNLQTVWASDNEFTGRIPDFIGSWTRLTSLRFQGNSFTGPIPSTFSNLTSLTELRIGDLSNGSSSLAFVSNMTSLTILVLRNNNMTGSIPSDIGGFRRLTQLDLSFNNLTGEIPSSLFSLSSLSHLILGNNKLNGTLPTQKSASLLNIDLSYNDLSGSFPAWINEQNLQLNLVANNFTIDSASISGLPSGLNCLQRNFPCNRGRPIYSDFGIKCGGPQIRSSSGILFERENETLGPATYFVTESQRWAVSNTGYFTGTNDPQYTANTLSQFPNTLDTELFQTQRLSASSLRYYGLGLENGNYTVNLHFAELAFPDSNTWQSRGRRLFDIYIQGNRVLQNFDIRKEAGGSFLAVRKNFTAEVTENFLEIHLFWAGKGTCCIPKQGDFGPAVSAISATPDFVPTVSNVPPSTKENRTGLIVGLVVGLGSVFFLIIGTVFLVVQRRKTRRAYEDEELLGIDTRPYTFSFSELRSATNDFNSSNKLGEGGFGPVYKGTLNDGRVVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFGQKHLIIDWPTRFEICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSDPSLEQDKVYLLEWAWYLHENNCELEMVDSELSEFSKEEVKRVIGVALLCTQTSPALRPSMSRVVAMLTGDIEVAAVTSKPGYLTDWKFDDITSFIDTPSTEEPDTGRYASTSSSIVDTHRSPANASEPMLRGLLGEGR | 1034 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 39646954 | 39656642 | - | ClCG09G022630.2 | Cla09g02204 | 281624 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g02204 | 1034 | Gene3D | Phosphorylase Kinase; domain 1 | 657 | 770 | - | - | |
Cla09g02204 | 1034 | Gene3D | - | 429 | 616 | - | - | |
Cla09g02204 | 1034 | MobiDBLite | consensus disorder prediction | 993 | 1017 | - | - | |
Cla09g02204 | 1034 | CDD | STKc_IRAK | 701 | 965 | - | - | |
Cla09g02204 | 1034 | SMART | serkin_6 | 695 | 963 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g02204 | 1034 | SUPERFAMILY | L domain-like | 102 | 407 | - | - | |
Cla09g02204 | 1034 | Gene3D | Transferase(Phosphotransferase) domain 1 | 771 | 974 | - | - | |
Cla09g02204 | 1034 | Pfam | Protein tyrosine and serine/threonine kinase | 698 | 962 | IPR001245 | GO:0004672|GO:0006468 | |
Cla09g02204 | 1034 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 139 | 1013 | - | - | |
Cla09g02204 | 1034 | ProSiteProfiles | Protein kinase domain profile. | 695 | 969 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g02204 | 1034 | Gene3D | Ribonuclease Inhibitor | 59 | 282 | IPR032675 | - | |
Cla09g02204 | 1034 | Gene3D | Ribonuclease Inhibitor | 283 | 418 | IPR032675 | - | |
Cla09g02204 | 1034 | MobiDBLite | consensus disorder prediction | 993 | 1034 | - | - | |
Cla09g02204 | 1034 | SUPERFAMILY | Protein kinase-like (PK-like) | 678 | 997 | IPR011009 | - | |
Cla09g02204 | 1034 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 139 | 1013 | - | - | |
Cla09g02204 | 1034 | Pfam | Malectin domain | 429 | 612 | IPR021720 | - | |
Cla09g02204 | 1034 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 815 | 827 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g02559 | Cla-Chr5:36880979 | Cla09g02204 | Cla-Chr9:39646954 | 2.06E-90 | dispersed | |
Cla06g01383 | Cla-Chr6:27330270 | Cla09g02204 | Cla-Chr9:39646954 | 1.37E-98 | dispersed | |
Cla09g02163 | Cla-Chr9:39277179 | Cla09g02204 | Cla-Chr9:39646954 | 0 | dispersed | |
Cla09g02204 | Cla-Chr9:39646954 | Cla10g01257 | Cla-Chr10:27428139 | 3.97E-28 | dispersed | |
Cla11g01692 | Cla-Chr11:30473510 | Cla09g02204 | Cla-Chr9:39646954 | 2.23E-06 | dispersed | |
Cla09g02204 | Cla-Chr9:39646954 | Cla11g01693 | Cla-Chr11:30524384 | 3.81E-07 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80833 | PF07714 | PK_Tyr_Ser-Thr | 6.90E-46 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g02204 | - | - | csv:101212465 | 1874.37 |