Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g02206 ATGATGGAATGGAATTGCCAACATTTCGCGGCTTATCCGTTTTCCACCTCCATCGAACAGCTCGCGCCGCCAGCCCCTCCGACCTCCTGCCCGCCGTCGTTATCTCCGGCCATCCCTCGCGCCGCCGCCGGAATTAAAAACGGGGTTAATCCTTCACCACTCCAAGGAGACTTTCATTCTGCCTTGGCTATGAGGAAGAAACGTAATAGCGAGAAACAAAAGGTAATTCTACCGCCGGACCTTCCGCCAGAGGTTACTGAGGAAGAAATTGAGGTCTCCGATGAGGACTTGGAGTTTGTTAAGGAGAATCAAGACTATGCCGTGTCTGTTTCCCGTCTAGACACTAAATCCATAACCAAGCATGTTACCCGGGTCGCTAATGTTGAAGAAGATGCTTTGGAGGTTTTATACGAGAAGCGTCTGCGCAAGAAGCCAGTGGAGAATCAGGAGGAGGAAAATAAGCTCCAAGTTGATCGTGTGGATGCTCTTCCTGTCAAAACTCTTGATGGGAAACTCTACTACCGGACATCAAAACTATCCGATGCACCTGAAAATGGTGGGAATGAAGAGGCAACGGAAGAGGACCAGGTAGATAATGGTGTAATGAAGTTAAATAAAGCAGAAAGGAGGGCAAAGCAAAAGAAAATTAAGAAGATTGCCAAGAAACAAGAGGATGCAACCCAAGCTGAAGAAGTTCAACCAACCCCACAAGCTGCAGTTTTGGCTGAAGTGGCAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCATTGCTGGCAGACCCAAATTCCAATATTAAATCTTTGAAGGAGATGCTGCAGATTGCTAAAGATAATGATCAAGCAATAGGGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTGGAAATTAAAGTGTCCAAGGATGTCAAGAAAATGCGGTACTATGAGTCTACTCTTCTTACTATTTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAAAAATTGCCGTCATTTCAGCATGTTGTTATTCGCTGTATATGTGCATTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACATTGTTAGGTATCGTTGTTAAAAACATAAGCTCCCCTGATGATGTTGTAAGAAAACTTTGTTGTGGTGCTATTAAGTCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCGACTGTGGAGGCCGTCCGGTTGATTGCTGATCATGTGAAATATCACGATTGCCAATTGCATCCTGATTCCATCCAGTCTTTTCTACATCTAACATTTGACGAGGATCTGAGGAAAGCAGAAAAGCAAGACGAGCATAGTAAAGTAAAGAACAAAAAACACAGGAAAATAAAGAATCGTGAGGAATCAAGTCATTTGCAAGGGAATGATGGAAGACAAAGTATGAGGACGAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAGTGAAGCAAAGAGAGATGCAGCCTGAAGCAAGTAGTGCCCCGTCCACTACTAGTCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGGTTGGGAAAATTCTCGCATCTCATTGATTTTGATTTCATGGGAGATCTTATGAATTATTTAAAAAGGCTTGCTTCTGGTGGTGACGATTCTTCTGAGAAACAGTCACAATGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTTCAGGACTTCTTTGTCCAGCTATACAATATTCTACTTGAGTACAGACCTGGGAGAGATGAAGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAGGCATCTTCTTCAGAAAAATGTCAAGTGCCGCAACCTCTTGGAAAACGATGCTGGTGGAGGTTCAGTATCTGGCTCTATTGCGAAATATCAGCCATATGCCTCTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAGCTGTCTCAACGATGGCTGCTAGCATATCAAGCATGAATAGTGCTCAAAATCAAGTATATATCTCCACTGTTTCTCCCCAACAAGCATTCAAAGACTTGTCGCTTGAACAGGAGTCTTTTAATCCACAATTTAATGCCCGAAAAGTTTACAAGAGGAAAAGAGCTACTGAATCTTCCCAGTCTACTCTGGATACGTACGGCACTATCGACGAAAATGAAGTGAAGGAGAAACTCTCAACGAGATTCTTTCTTCTCCGGGACATCAAGGACAATGAAAGGTTGAGGGCTGAATTGGACCGCACCAATTTGTCTTTGCAGCTATACGAAGAATACAAAAGGCAAAAGAGAAAAACTAAAAAGTCTAGGAATGTTTAG 2598 43.07 MMEWNCQHFAAYPFSTSIEQLAPPAPPTSCPPSLSPAIPRAAAGIKNGVNPSPLQGDFHSALAMRKKRNSEKQKVILPPDLPPEVTEEEIEVSDEDLEFVKENQDYAVSVSRLDTKSITKHVTRVANVEEDALEVLYEKRLRKKPVENQEEENKLQVDRVDALPVKTLDGKLYYRTSKLSDAPENGGNEEATEEDQVDNGVMKLNKAERRAKQKKIKKIAKKQEDATQAEEVQPTPQAAVLAEVAEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKEMLQIAKDNDQAIGKLGLLSLLAVFKDIIPGYRIRLPTEKELEIKVSKDVKKMRYYESTLLTIYKGYLQKLMSLEKLPSFQHVVIRCICALLDAVPHFNFRETLLGIVVKNISSPDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIADHVKYHDCQLHPDSIQSFLHLTFDEDLRKAEKQDEHSKVKNKKHRKIKNREESSHLQGNDGRQSMRTKFTEEVAADYRAASLAPDVVKQREMQPEASSAPSTTSPSGSHPLLAPCLNGLGKFSHLIDFDFMGDLMNYLKRLASGGDDSSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNILLEYRPGRDEGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVRHLLQKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWELNLLWKHYHPAVSTMAASISSMNSAQNQVYISTVSPQQAFKDLSLEQESFNPQFNARKVYKRKRATESSQSTLDTYGTIDENEVKEKLSTRFFLLRDIKDNERLRAELDRTNLSLQLYEEYKRQKRKTKKSRNV 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39674521 39688023 - ClCG09G022650.2 Cla09g02206 281626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g02206 865 Coils Coil 204 224 - -
Cla09g02206 865 SUPERFAMILY ARM repeat 339 629 IPR016024 -
Cla09g02206 865 Pfam CBF/Mak21 family 592 747 IPR005612 -
Cla09g02206 865 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 70 810 IPR016903 -
Cla09g02206 865 Coils Coil 832 852 - -
Cla09g02206 865 MobiDBLite consensus disorder prediction 524 539 - -
Cla09g02206 865 Pfam Nucleolar complex-associated protein 257 347 IPR011501 -
Cla09g02206 865 MobiDBLite consensus disorder prediction 460 495 - -
Cla09g02206 865 MobiDBLite consensus disorder prediction 514 539 - -
Cla09g02206 865 MobiDBLite consensus disorder prediction 215 234 - -
Cla09g02206 865 MobiDBLite consensus disorder prediction 178 201 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g02206 K14834 - csv:101213821 1377.84