Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g02223 ATGTCCAAGTTCTTCTTTGTTTTTGTTGCCCTCTTCCTCCCTGCTCTAGTCTCCGGCGGGCGGCAGTCATGTACATGTGATTCCGATGGCGCTGCCGCCGAGCACAACGCTGCAAAAGAAGCAATCAAATACAAGGTAGGGTCGATTGCGTCTGTGCTGGTGGCCGGCGCTGCAGGGGTGAGCCTCCCTTTGGTGGGCAAGAAGATTCAGTCTCTGAGGCCAGAAAACGACATATTTTTCATGATCAAGGCTTTTGCTGCAGGGGTCATTTTGGGCACTGGGTTCATCCACATACTCCCCGATGCCTTCCAAGACTTGACCTCCCCGTGTATTGCCCAAACCCCTTGGGGCGATTTCCCTTTTGCGGGCTTCATTGCGATGGCTGCCTCCATCGCCACCTTGATGTTGGACACATTTGCAACCAGTTTTTACCAGAGACGCCACTTCAGTAAAACCAAGCAGGTAACTGCAGATCAGGAAAGAGGCGACGACCATGCCGGTCACGTGCATGTTCACACGCACGCCACACATGGCCACGCTCACGGATCCGCCGCCTCTCCCGCCGGAGACTTGAGTCTCGCTGACTTGATCCGCTACCGGATTATATCTCAGGTGTTGGAGTTGGGAATTGTGGTTCATTCGGTAATAATTGGTATTTCTCTTGGTGCCTCACAGAGCCCTGCCACGATTAAGCCACTACTTGTTGCTCTGTCTTTCCACCAATTTTTCGAGGGCATGGGTCTCGGTGGCTGCATTTCCCAGGCACAATTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTCTCACTGACAGCACCTGTGGGAATTGGAGTGGGAATTGGAATCTCCGGAGTTTACAAAGACAACAGCCGGACGGCTCTGATCGTGGAAGGAAGCATGAACTCAGCATCGGCAGGAATATTGATATACATGGCGCTTGTTGACCTTCTTGCAGCAGATTTCATGAACCCAAGGATGCAAAACAATTTGGGGCTTCAATTAGGGGCTAACATCTCTTTGCTTCTAGGAGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTGA 1068 51.87 MSKFFFVFVALFLPALVSGGRQSCTCDSDGAAAEHNAAKEAIKYKVGSIASVLVAGAAGVSLPLVGKKIQSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIAQTPWGDFPFAGFIAMAASIATLMLDTFATSFYQRRHFSKTKQVTADQERGDDHAGHVHVHTHATHGHAHGSAASPAGDLSLADLIRYRIISQVLELGIVVHSVIIGISLGASQSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSLTAPVGIGVGIGISGVYKDNSRTALIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGANISLLLGAACMSVLAKWA 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39821101 39823676 + ClCG09G022820.1 Cla09g02223 281643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g02223 355 TIGRFAM zip: ZIP zinc/iron transport family 26 355 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cla09g02223 355 Pfam ZIP Zinc transporter 44 352 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cla09g02223 355 PANTHER ZINC/IRON TRANSPORTER 9 355 - -
Cla09g02223 355 PANTHER METAL TRANSPORT PROTEIN 9 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g02223 Cla-Chr9:39821101 Cla11g01645 Cla-Chr11:30141037 4.49E-128 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g02223 K14709 - csv:101216720 543.117