Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00006 | ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGGGTTCTTCCTTTAACTCCAGCAGTGGCAATGATGATACTCTCCTTCAAAGCTTTGCTGCTTCTTCAAATGGGGACGATTATGACAGTGATGGCTCCAATTTTGCACCCCCTACTCCTACAACCATATCCACGGCAATTCCTGCAGAACTTGCTGGTGTCATACCTTTGATTGACAGATTCCAGGTCGAAGGATTCTTAAGGATGATGCACAAACAAATCCATTCTTCTGGAAAACGTGGATTCTTTTCCAAAAGATCTGTAGGTCCTCAAGTTCGGGAAAAATTCACATTTGAGGATATGTTGTGTTTCCAAAAGGATCCTATACCAACTTCATTACTTAAAATTAACTCTGACCTGGTGAGCCGGGCCATAAAACTATTCCAAATAATCTTGAAGTACATAGGTGTTGACTCTTCTGATAGAGTTATTGCAACAAGCTTAGACGAACGAATTGAGCTTGTTGGAAAACTATACAAGCACACATTGAAACGTTCAGAGCTACGAGATGAACTTTTTATCCAAATCTCTAAGCAAACTAGAAATTCTCCTGATAGGCAATATTTAATCAAAGCATGGGAGCTGATGTATTTATGTGCATCTGCTATGCCTCCTAGCAAGGATATTGGTGGATATCTGTCAGAGTATGTTCATAATGTTGCCCAAGGCATAAGTACTGATCCGGAGGTTCGAGTTCTTGCATTAAATACACTGAATGCTTTGAAGCGTTGCATGAAGGCTGGTCCCAGGCATATAATACCAGGTCGCGAGGAAGTCGAAGCTCTTTTAACAGGCCGAAAACTTACAACTATAGTATTTTTCTTGGATGAAACTTTTGAAGAAATCACATATGATATGACAACAACAGTGGCTGATTCTGTTGAGGAACTTTCAGGTGTTATAAAACTGTCAGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGCTCGTTAGTGGGGCTAAAGCACTTGATCTAGGGAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTGTTAGCAGAATTCAAGGCAGCAAAAGATCGAAGCAAAGGAGAAATTCTGCACTTCAAGTTGACATTTAAAAAGAAGCTGTTTCGGGAGTCTGATGAAGCTGTAGCGGACCCAATGTTTATACAACTGTCATATGTTCAGCTGCAGCATGACTATTTGTTGGGAAATTATCCTGTTGGAAGGGATGATGCTGCACAGCTTTCAGCACTACAAATCCTTGTTGAAATTGGATTTATTACCAGTCCAGAATCTTGCACTGATTGGAATTCGCTTCTAGAAAGATTTGTACCCAGACAAATTGCCATAACAAGACCAAAGCGAGAGTGGGAGTTGGATATTCTCTCGCGTTTTCGTTCAATGGAGCATTTGACGAAGGATGACGCGAGACAACAATTTCTTCGAATATTGAGAACACTTCCTTATGGGAATTCAGTTTTCTTCGGCGTCCGCAAGATTGATGATCCCATTGGACTTCTACCTGGGCGAATAATTTTGGGCATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCAAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGTAGCAGTAACACTGCGGTTTTTTTTAAGATGAGAGTTGCTGGCGTTCTACACATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAGACACACATAAATGATGTCATGTTGCGTCGTTACTCTAAAGCTAGATCTGCTGCTGTTGGTTCCATGCATGGAGATTCTTCCGGCAACTTAAAGATTCAAAGTGTGGAAGCATATGAGAAACGAGTTCAAGATTTGAGTAAGGGCATTGAAGAGTCTAAGAGAAATGCTGAACAGTTGCTGAAGGAATTGCATGAAAAGAATAAGCAAGAAGTGGTAATGCAAGAAGAATTGGAAACCCTAAAAGAATCATTGAGATTTGAAAAGCACAACTTAGCTGAGGCAACACGTAGTCTTGAGAGGCTGAGATTGCAGTATGATGAAAAAGACAAGGAACACCAGGACATGCTAATCGAAAAAAGGGGTATGGAAGCAAAAATAGCAAAATTGAGCACCACGGTGTTGGAAAATAACGGGAAAAAAGATACAGTTGGAATTGATGAACAGCTTCTACAAAAACTTCAAGATGAGTTGAGGCTTCGAAATGATGAGTTGCAAGCCACTGAAGAAATTAGAAAGAAACTGGTAAATGAAAAGATGTTCCTGGAACAAAGAATTTTTGGACTTGAGAAGAAGACTAGCGATGAGATGGAACATCTCCAGAGAAGCTTTGAACATGAACGCAAAGTCTTGAAGCTGAGAGTGGCAGAACTTGAAAAAAAACTTGAAGAAGTAACTCAAGAACTAGCTGCCATGGAGTCAACTCTCACAATCAGGAACTCTGATTTGGCGGCACTGCAAAATAATTTGAAGGAACTAGAGGAACTACGAGAGATGAAAGAGGACATTGACCGAAAAAATGAGCAAACAGCCAAGATTTTGAAGATGCAAGGGGCTCAGCTAGCTGAGATGGAAGCGCTTTATAAGGAAGAGCAAGTTCTAAGGAAACGCTATTTCAACATGATAGAGGATATGAAAGGAAAAATTAGAGTTTACTGTCGACTTCGACCTCTTAATGATAAAGAAATTATTGAAAGAGAAAAAAATGTGCTTACAAGTCTAGATGAGTTCACAGTCGAACATCTTTGGAAAGATGATAAGCTGAAGCAACATATGTACGATCGTGTATTTGATGGCACTGCCTCCCAGGAGGATGTTTTTGAAGATACGCGGTATCTTGTCCAGTCTGCTGTAGATGGTTATAATGTATGCATATTTGCTTATGGTCAAACTGGTTCTGGGAAGACATTTACAATATATGGATCTGAGGACCACCCTGGACTAACACCACGTGCCATTGGAGAACTTTTTAGGATTTTGAAGCGGGATAGTAACAAGTTCTCGTTCTCATTGAAGGCATACATGCTAGAATTATATCAAGATACATTGGTAGATCTTCTTTTGCCAAGGAATGCAAAACGATTGAGATTAGAGATAAAAAAGGATACAAAGGGAATGGTATCCATTGAAAACATCACAATAGCTTCTATTTCAACATTTGAAGAATTGAAAAATATTATTTATAGAGGATTGGAGCAACGACATACTTCAGAGACTCAGATGAACGAAGAAAGTTCAAGATCACATTTGATACTTTCAATTATTATTGAAAGTACCAACCTTCAGACACAATCTGTTTCTAAAGGAAAGCTTAGTTTTGTTGATCTTGCGGGATCAGAGAGAGTGAAGAAATCAGGCTCTTCTGGTAGCCAACTTAAGGAAGCTCAAAGCATAAATAAATCACTTTCAGCACTTGGGGATGTTATCAGTGCTTTGTTTTTAGGGGGCCAGCACATACCTTACAGAAATCATAAGCTAACAATGTTGATGAGTGATTCACTCGGTGGTAATGCCAAAACGCTTATGTTTGTCAATGTCTCTCCGGCTGAATCCAACTTGGACGAGACATACAATTCACTCATGTATGCATCAAGAGTTCGATCAATTGTTAATGATCCAAGCAAAAATGTAGCATCTAAGGAGGTTGCTCGACTGAAAAAAATGGTCGCTTATTGGAAAGAACAAGCAGGTAGGAGGGGAGAGGATGAGGAGTTGGAAGAAATCCAAGACGAGCGACATACTAAAGAAAAGGGAGACGTTAGATATTCGATGTAG | 3798 | 39.84 | MTFDMAQSARTMGSSFNSSSGNDDTLLQSFAASSNGDDYDSDGSNFAPPTPTTISTAIPAELAGVIPLIDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYIGVDSSDRVIATSLDERIELVGKLYKHTLKRSELRDELFIQISKQTRNSPDRQYLIKAWELMYLCASAMPPSKDIGGYLSEYVHNVAQGISTDPEVRVLALNTLNALKRCMKAGPRHIIPGREEVEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGVIKLSAHSSFSLFECRKLVSGAKALDLGNEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFIQLSYVQLQHDYLLGNYPVGRDDAAQLSALQILVEIGFITSPESCTDWNSLLERFVPRQIAITRPKREWELDILSRFRSMEHLTKDDARQQFLRILRTLPYGNSVFFGVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSMHGDSSGNLKIQSVEAYEKRVQDLSKGIEESKRNAEQLLKELHEKNKQEVVMQEELETLKESLRFEKHNLAEATRSLERLRLQYDEKDKEHQDMLIEKRGMEAKIAKLSTTVLENNGKKDTVGIDEQLLQKLQDELRLRNDELQATEEIRKKLVNEKMFLEQRIFGLEKKTSDEMEHLQRSFEHERKVLKLRVAELEKKLEEVTQELAAMESTLTIRNSDLAALQNNLKELEELREMKEDIDRKNEQTAKILKMQGAQLAEMEALYKEEQVLRKRYFNMIEDMKGKIRVYCRLRPLNDKEIIEREKNVLTSLDEFTVEHLWKDDKLKQHMYDRVFDGTASQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDHPGLTPRAIGELFRILKRDSNKFSFSLKAYMLELYQDTLVDLLLPRNAKRLRLEIKKDTKGMVSIENITIASISTFEELKNIIYRGLEQRHTSETQMNEESSRSHLILSIIIESTNLQTQSVSKGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALFLGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSKNVASKEVARLKKMVAYWKEQAGRRGEDEELEEIQDERHTKEKGDVRYSM | 1265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 149122 | 169354 | + | ClCG10G000070.2 | Cla10g00006 | 281665 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00006 | 1265 | CDD | KISc_C_terminal | 887 | 1212 | - | - | |
Cla10g00006 | 1265 | SUPERFAMILY | Prismane protein-like | 832 | 893 | IPR011254 | GO:0003824|GO:0016491 | |
Cla10g00006 | 1265 | Gene3D | - | 1213 | 1261 | - | - | |
Cla10g00006 | 1265 | ProSitePatterns | Kinesin motor domain signature. | 1110 | 1121 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Cla10g00006 | 1265 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 65 | 1241 | - | - | |
Cla10g00006 | 1265 | Gene3D | - | 278 | 382 | - | - | |
Cla10g00006 | 1265 | SUPERFAMILY | PH domain-like | 499 | 587 | - | - | |
Cla10g00006 | 1265 | MobiDBLite | consensus disorder prediction | 1236 | 1265 | - | - | |
Cla10g00006 | 1265 | Pfam | FERM central domain | 385 | 499 | IPR019748 | - | |
Cla10g00006 | 1265 | Coils | Coil | 732 | 773 | - | - | |
Cla10g00006 | 1265 | Coils | Coil | 782 | 854 | - | - | |
Cla10g00006 | 1265 | Gene3D | - | 391 | 492 | IPR014352 | - | |
Cla10g00006 | 1265 | Gene3D | Kinesin motor domain | 832 | 1211 | IPR036961 | - | |
Cla10g00006 | 1265 | SMART | B41_5 | 275 | 499 | IPR019749 | - | |
Cla10g00006 | 1265 | ProSiteProfiles | MyTH4 domain profile. | 115 | 274 | IPR000857 | GO:0005856 | |
Cla10g00006 | 1265 | CDD | FERM_C_KCBP | 496 | 602 | - | - | |
Cla10g00006 | 1265 | SMART | kinesin_4 | 887 | 1218 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla10g00006 | 1265 | Gene3D | MyTH4 domain | 94 | 276 | IPR038185 | - | |
Cla10g00006 | 1265 | SUPERFAMILY | Second domain of FERM | 377 | 494 | IPR035963 | - | |
Cla10g00006 | 1265 | ProSiteProfiles | Kinesin motor domain profile. | 889 | 1210 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla10g00006 | 1265 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 889 | 1238 | IPR027417 | - | |
Cla10g00006 | 1265 | Pfam | Kinesin motor domain | 895 | 1210 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla10g00006 | 1265 | Gene3D | - | 497 | 604 | IPR011993 | - | |
Cla10g00006 | 1265 | PRINTS | Kinesin heavy chain signature | 961 | 982 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla10g00006 | 1265 | PRINTS | Kinesin heavy chain signature | 1160 | 1181 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla10g00006 | 1265 | PRINTS | Kinesin heavy chain signature | 1111 | 1129 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla10g00006 | 1265 | PRINTS | Kinesin heavy chain signature | 1080 | 1097 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla10g00006 | 1265 | ProSiteProfiles | FERM domain profile. | 279 | 593 | IPR000299 | GO:0005856 | |
Cla10g00006 | 1265 | Pfam | MyTH4 domain | 168 | 272 | IPR000857 | GO:0005856 | |
Cla10g00006 | 1265 | CDD | FERM_B-lobe | 394 | 492 | IPR019748 | - | |
Cla10g00006 | 1265 | SMART | MyTH4_1 | 115 | 274 | IPR000857 | GO:0005856 | |
Cla10g00006 | 1265 | Coils | Coil | 617 | 700 | - | - | |
Cla10g00006 | 1265 | PANTHER | KINESIN-LIKE PROTEIN | 65 | 1241 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g00006 | Cla-Chr10:149122 | Cla10g01064 | Cla-Chr10:24658542 | 8.88E-74 | dispersed | |
Cla10g00006 | Cla-Chr10:149122 | Cla03g00482 | Cla-Chr3:5344976 | 1.59E-70 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00006 | - | - | csv:101206704 | 2281.91 |