Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00013 ATGTCTGTTTTTTGTCTCTGCTTCTGCCTTCTGTTTGCTGGTAGCGCCACCGCGGGCGGTGGAGACGGCGGCGGCGGTCACTCCAGGGAGCTCGATAACACACCCACCTGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTTATTTCCATTGTGTTGGAAAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTATGAAGCTCTAGAGAAGGTTAAGGCTGAGTTGATGATTTTGGGATTCATTTCCCTGCTTCTGACTTTTGCACAAGCATATATAGTCCAAATTTGTATTCCTCCAGCCATTGCAAACTCCATGTTGCCTTGTCACCTTGAAGAGAAAGATGGCTCATCATCTGCAGCCAGTGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCTGGAGGCCACAATGTCGTCTCGTGTAAGGATGGTAACGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATTTTCTTCTTAGCTGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGGTAAAGTTCTGTCATGTAGTTAACTTTTGGGATCATTGCCGTGCGAATTTCGACCTACTTTATCGCTTCGTTATGAACGGAAGTGTGTCTACTCAGATTCGAGGCTGGAAGGAGTGGGAGCAGGAAACTTCAACCCATATCTATGAGTTTTTCAACGATCCTGCAAGATTTAGGCTTACTCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGTCTTCCTTTCTTCTTCTATATTGGCTGCTTTTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACACTACGCAATGGATTCATAACAGTTCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGACGACTTCAAGGTAGTAGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTCCTTAATCTAGCTGGATGGCATACATTGTTTTGGGCATCATTTATCCCTTTGATTGTAAGAAAAATCTCTTCCTTCAGGGAAAATTCACCAGATTGGCTGGTTCGTTTATTATACAATGATGGCTGTTTTAAACTCAAACAGATAATCTTAGCTGTTGGATCAAAACTTCAAGCCATTTTGACTAGAATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCACTCGTGCAAGGATCTGATAAATATTTCTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTATTTCAGAATGCGTTCCAGACCACCTATATTTTGTCTACACTGTATTCTTTTGGCCCGAATTCTTGCTTCTCCGATGGTCGCATCCTTACAATTATAAAAGTTGGTTTAGGGGTAGCAGCATTATTCCTTTGCAGCTATGTTACGCTTCCGATATATGCCCTTGTAACTCAGATGGGTTCGGGTATGAAGAGGTCCATCTTTGATGAACAGACATCAAAGGCACTCAAGAAATGGCATGAAACAGCCAAGAAGAAGAAGCGGGTTCAACGAGCCTCAGCGACTAAAACACTTGGAGGTAGTTCAAATGCTTCACCTCTACGCTCCTTTGGACGCTCATTGCGACGGTTTAAAACTACGGGACACTCCATACGTGTGCCTGCGTATGAGGACCTCGAGTCGTCTGATTATGAGGGCGATCCATTAGCAACACCTACACAAGTATCAACAACGGAATCGATTAATGTTGATGTAGATGGAGATGAAATACGTGAAATTGCTGAAACAGACCAACCCCACAATACAAAGCAAGAAGAAGGAGATGAGTTCTCATTCATAAAGCCTGCAGCACCACTGAAATAA 1914 42.69 MSVFCLCFCLLFAGSATAGGGDGGGGHSRELDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANSMLPCHLEEKDGSSSAASEDEHHRRLQWLIRRSLAGGHNVVSCKDGNVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRVKFCHVVNFWDHCRANFDLLYRFVMNGSVSTQIRGWKEWEQETSTHIYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNLAGWHTLFWASFIPLIVRKISSFRENSPDWLVRLLYNDGCFKLKQIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQTTYILSTLYSFGPNSCFSDGRILTIIKVGLGVAALFLCSYVTLPIYALVTQMGSGMKRSIFDEQTSKALKKWHETAKKKKRVQRASATKTLGGSSNASPLRSFGRSLRRFKTTGHSIRVPAYEDLESSDYEGDPLATPTQVSTTESINVDVDGDEIREIAETDQPHNTKQEEGDEFSFIKPAAPLK 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 235056 241305 - ClCG10G000140.1 Cla10g00013 281672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00013 637 MobiDBLite consensus disorder prediction 611 627 - -
Cla10g00013 637 MobiDBLite consensus disorder prediction 611 637 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 34 197 - -
Cla10g00013 637 Pfam Mlo family 214 361 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 Pfam Mlo family 390 551 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 Pfam Mlo family 29 197 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 1 34 197 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 MobiDBLite consensus disorder prediction 584 599 - -
Cla10g00013 637 MobiDBLite consensus disorder prediction 526 551 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 209 361 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 390 609 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 1 209 361 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 1 390 609 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 MobiDBLite consensus disorder prediction 579 599 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02050 Cla-Chr2:35566020 Cla10g00013 Cla-Chr10:235056 2.36E-157 dispersed
Cla05g02133 Cla-Chr5:32923585 Cla10g00013 Cla-Chr10:235056 5.35E-157 dispersed
Cla08g00934 Cla-Chr8:21860892 Cla10g00013 Cla-Chr10:235056 7.38E-143 dispersed
Cla11g01772 Cla-Chr11:31317987 Cla10g00013 Cla-Chr10:235056 1.55E-78 transposed
Cla01g02044 Cla-Chr1:34955812 Cla10g00013 Cla-Chr10:235056 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00013 K08472 - csv:101205522 977.237