Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00013 ATGTCTGTTTTTTGTCTCTGCTTCTGCCTTCTGTTTGCTGGTAGCGCCACCGCGGGCGGTGGAGACGGCGGCGGCGGTCACTCCAGGGAGCTCGATAACACACCCACCTGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTTATTTCCATTGTGTTGGAAAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTATGAAGCTCTAGAGAAGGTTAAGGCTGAGTTGATGATTTTGGGATTCATTTCCCTGCTTCTGACTTTTGCACAAGCATATATAGTCCAAATTTGTATTCCTCCAGCCATTGCAAACTCCATGTTGCCTTGTCACCTTGAAGAGAAAGATGGCTCATCATCTGCAGCCAGTGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCTGGAGGCCACAATGTCGTCTCGTGTAAGGATGGTAACGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATTTTCTTCTTAGCTGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGGTAAAGTTCTGTCATGTAGTTAACTTTTGGGATCATTGCCGTGCGAATTTCGACCTACTTTATCGCTTCGTTATGAACGGAAGTGTGTCTACTCAGATTCGAGGCTGGAAGGAGTGGGAGCAGGAAACTTCAACCCATATCTATGAGTTTTTCAACGATCCTGCAAGATTTAGGCTTACTCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGTCTTCCTTTCTTCTTCTATATTGGCTGCTTTTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACACTACGCAATGGATTCATAACAGTTCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGACGACTTCAAGGTAGTAGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTCCTTAATCTAGCTGGATGGCATACATTGTTTTGGGCATCATTTATCCCTTTGATTGTAAGAAAAATCTCTTCCTTCAGGGAAAATTCACCAGATTGGCTGGTTCGTTTATTATACAATGATGGCTGTTTTAAACTCAAACAGATAATCTTAGCTGTTGGATCAAAACTTCAAGCCATTTTGACTAGAATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCACTCGTGCAAGGATCTGATAAATATTTCTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTATTTCAGAATGCGTTCCAGACCACCTATATTTTGTCTACACTGTATTCTTTTGGCCCGAATTCTTGCTTCTCCGATGGTCGCATCCTTACAATTATAAAAGTTGGTTTAGGGGTAGCAGCATTATTCCTTTGCAGCTATGTTACGCTTCCGATATATGCCCTTGTAACTCAGATGGGTTCGGGTATGAAGAGGTCCATCTTTGATGAACAGACATCAAAGGCACTCAAGAAATGGCATGAAACAGCCAAGAAGAAGAAGCGGGTTCAACGAGCCTCAGCGACTAAAACACTTGGAGGTAGTTCAAATGCTTCACCTCTACGCTCCTTTGGACGCTCATTGCGACGGTTTAAAACTACGGGACACTCCATACGTGTGCCTGCGTATGAGGACCTCGAGTCGTCTGATTATGAGGGCGATCCATTAGCAACACCTACACAAGTATCAACAACGGAATCGATTAATGTTGATGTAGATGGAGATGAAATACGTGAAATTGCTGAAACAGACCAACCCCACAATACAAAGCAAGAAGAAGGAGATGAGTTCTCATTCATAAAGCCTGCAGCACCACTGAAATAA 1914 42.69 MSVFCLCFCLLFAGSATAGGGDGGGGHSRELDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANSMLPCHLEEKDGSSSAASEDEHHRRLQWLIRRSLAGGHNVVSCKDGNVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRVKFCHVVNFWDHCRANFDLLYRFVMNGSVSTQIRGWKEWEQETSTHIYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNLAGWHTLFWASFIPLIVRKISSFRENSPDWLVRLLYNDGCFKLKQIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQTTYILSTLYSFGPNSCFSDGRILTIIKVGLGVAALFLCSYVTLPIYALVTQMGSGMKRSIFDEQTSKALKKWHETAKKKKRVQRASATKTLGGSSNASPLRSFGRSLRRFKTTGHSIRVPAYEDLESSDYEGDPLATPTQVSTTESINVDVDGDEIREIAETDQPHNTKQEEGDEFSFIKPAAPLK 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 235056 241305 - ClCG10G000140.1 Cla10g00013 281672

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00013 637 MobiDBLite consensus disorder prediction 611 627 - -
Cla10g00013 637 MobiDBLite consensus disorder prediction 611 637 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 34 197 - -
Cla10g00013 637 Pfam Mlo family 214 361 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 Pfam Mlo family 390 551 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 Pfam Mlo family 29 197 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 1 34 197 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 MobiDBLite consensus disorder prediction 584 599 - -
Cla10g00013 637 MobiDBLite consensus disorder prediction 526 551 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 209 361 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 390 609 - -
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 1 209 361 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 PANTHER MLO-LIKE PROTEIN 1 390 609 IPR004326 GO:0006952|GO:0016021
Cla10g00013 637 MobiDBLite consensus disorder prediction 579 599 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00013 K08472 MLO; mlo protein - csv:101205522 977.237
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02050 Cla-Chr2:35566020 Cla10g00013 Cla-Chr10:235056 2.36E-157 dispersed
Cla05g02133 Cla-Chr5:32923585 Cla10g00013 Cla-Chr10:235056 5.35E-157 dispersed
Cla08g00934 Cla-Chr8:21860892 Cla10g00013 Cla-Chr10:235056 7.38E-143 dispersed
Cla11g01772 Cla-Chr11:31317987 Cla10g00013 Cla-Chr10:235056 1.55E-78 transposed
Cla01g02044 Cla-Chr1:34955812 Cla10g00013 Cla-Chr10:235056 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla09g01826 . 74 609 MLO family AT5G53760 70.7 2.2e-216 748.8
Cla11g01772 CCT 8 672 MLO family AT5G53760 56.7 4.3e-196 681.4
Cla09g01833 . 44 516 MLO family AT5G53760 56.1 8.8e-149 524.2
Cla09g01826 . 74 609 MLO family AT1G26700 69.5 8.7e-210 726.9
Cla11g01772 CCT 4 653 MLO family AT1G26700 55.6 2.0e-190 662.5
Cla09g01833 . 44 516 MLO family AT1G26700 54.7 6.5e-141 498.0
Cla03g00220 . 8 536 MLO family AT2G39200 63.8 1.3e-192 669.8
Cla05g02133 . 7 499 MLO family AT2G39200 67.7 8.5e-192 667.2
Cla02g02050 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cla02g02050 . 1 416 MLO family AT1G61560 65.9 6.2e-160 560.8
Cla03g00220 . 1 416 MLO family AT1G61560 66.3 2.9e-157 552.0
Cla05g02133 . 7 408 MLO family AT1G61560 65.2 9.5e-153 537.0
Cla01g02044 . 28 427 MLO family AT1G61560 50.6 4.9e-109 391.7
Cla01g02044 . 18 495 MLO family AT2G17430 61.1 3.5e-163 572.0
Cla10g00013 . 29 549 MLO family AT2G17430 56.2 4.0e-151 531.9
Cla01g02044 . 7 572 MLO family AT2G17480 61.3 4.9e-187 651.4
Cla10g00013 . 5 633 MLO family AT2G17480 53.6 6.7e-168 587.8
Cla03g00220 . 8 463 MLO family AT2G17480 52.6 2.4e-125 446.4
Cla02g02050 . 8 463 MLO family AT2G17480 50.3 2.7e-124 443.0
Cla01g02044 . 28 386 MLO family AT1G42560 58.7 1.5e-120 429.9
Cla08g00934 . 18 382 MLO family AT1G42560 55.1 7.2e-115 411.0
Cla02g00033 . 10 421 MLO family AT4G24250 50.9 7.2e-113 404.4
Cla01g02044 . 8 387 MLO family AT5G65970 66.8 8.4e-145 510.8
Cla10g00013 . 28 447 MLO family AT5G65970 56.9 1.0e-126 450.7
Cla08g00934 . 24 382 MLO family AT5G65970 53.1 4.1e-107 385.6
Cla02g02050 . 2 381 MLO family AT5G65970 51.8 5.9e-106 381.7
Cla03g00220 . 2 381 MLO family AT5G65970 50.9 2.3e-102 369.8
Cla01g02044 . 20 475 MLO family AT2G33670 59.2 1.0e-148 523.9
Cla10g00013 . 29 530 MLO family AT2G33670 51.8 2.5e-131 466.1
Cla08g00934 . 19 415 MLO family AT2G33670 50.5 2.1e-122 436.4
Cla05g02133 . 64 525 MLO family AT1G11310 64.3 2.4e-169 592.4
Cla03g00220 . 63 506 MLO family AT1G11310 64.9 4.6e-165 578.2
Cla02g02050 . 63 520 MLO family AT1G11310 62.7 7.3e-163 570.9
Cla06g00048 . 5 548 MLO family AT2G44110 54.4 1.1e-158 557.0
Cla06g00048 . 1 555 MLO family AT4G02600 67.0 5.0e-207 717.6
Cla05g01024 CCT 5 591 MLO family AT1G11000 58.6 4.8e-179 624.8
Cla06g00048 . 1 555 MLO family AT4G02600 67.0 5.0e-207 717.6
Cla05g02133 . 64 525 MLO family AT1G11310 64.3 2.4e-169 592.4
Cla03g00220 . 63 506 MLO family AT1G11310 64.9 4.6e-165 578.2
Cla02g02050 . 63 520 MLO family AT1G11310 62.7 7.3e-163 570.9
Cla05g01024 CCT 5 591 MLO family AT1G11000 58.6 4.8e-179 624.8
Cla01g02044 . 20 475 MLO family AT2G33670 59.2 1.0e-148 523.9
Cla10g00013 . 29 530 MLO family AT2G33670 51.8 2.5e-131 466.1
Cla08g00934 . 19 415 MLO family AT2G33670 50.5 2.1e-122 436.4
Cla02g02050 . 1 416 MLO family AT1G61560 65.9 6.2e-160 560.8
Cla03g00220 . 1 416 MLO family AT1G61560 66.3 2.9e-157 552.0
Cla05g02133 . 7 408 MLO family AT1G61560 65.2 9.5e-153 537.0
Cla01g02044 . 28 427 MLO family AT1G61560 50.6 4.9e-109 391.7
Cla01g02044 . 18 495 MLO family AT2G17430 61.1 3.5e-163 572.0
Cla10g00013 . 29 549 MLO family AT2G17430 56.2 4.0e-151 531.9
Cla01g02044 . 7 572 MLO family AT2G17480 61.3 4.9e-187 651.4
Cla10g00013 . 5 633 MLO family AT2G17480 53.6 6.7e-168 587.8
Cla03g00220 . 8 463 MLO family AT2G17480 52.6 2.4e-125 446.4
Cla02g02050 . 8 463 MLO family AT2G17480 50.3 2.7e-124 443.0
Cla01g02044 . 28 386 MLO family AT1G42560 58.7 1.5e-120 429.9
Cla08g00934 . 18 382 MLO family AT1G42560 55.1 7.2e-115 411.0
Cla01g02044 . 8 387 MLO family AT5G65970 66.8 8.4e-145 510.8
Cla10g00013 . 28 447 MLO family AT5G65970 56.9 1.0e-126 450.7
Cla08g00934 . 24 382 MLO family AT5G65970 53.1 4.1e-107 385.6
Cla02g02050 . 2 381 MLO family AT5G65970 51.8 5.9e-106 381.7
Cla03g00220 . 2 381 MLO family AT5G65970 50.9 2.3e-102 369.8
Cla09g01826 . 74 609 MLO family AT5G53760 70.7 2.2e-216 748.8
Cla11g01772 CCT 8 672 MLO family AT5G53760 56.7 4.3e-196 681.4
Cla09g01833 . 44 516 MLO family AT5G53760 56.1 8.8e-149 524.2
Cla03g00220 . 8 536 MLO family AT2G39200 63.8 1.3e-192 669.8
Cla05g02133 . 7 499 MLO family AT2G39200 67.7 8.5e-192 667.2
Cla02g02050 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cla02g00033 . 10 421 MLO family AT4G24250 50.9 7.2e-113 404.4
Cla09g01826 . 74 609 MLO family AT1G26700 69.5 8.7e-210 726.9
Cla11g01772 CCT 4 653 MLO family AT1G26700 55.6 2.0e-190 662.5
Cla09g01833 . 44 516 MLO family AT1G26700 54.7 6.5e-141 498.0
Cla06g00048 . 5 548 MLO family AT2G44110 54.4 1.1e-158 557.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000765 3 4 3 4 2 3 4 3 3 3 2 3 4 3 3 4 2 3 4 3 3 3 3 3 3 3 2 6 2 2 93
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla10g00013 Cla_Chr10 FPKM 3.702767 3.397613 56.58799 50.255878 251.997345 263.897308 249.53244 36.709682 39.311508 36.336567