Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00044 | ATGCCGATTGAAGATGATGTTGAGAGCTGCGGTAGCAGAGCCACCGACTCCTCCTCGTCCCATGTGAACCCGAGGCATCATCGCCAGAAGCTTGAAGTCTACAACGAAGTGCTCCGACGAATCCAGCAATCCAATTTCCATGAGGCCAATCTACCTGGGTTTGATGATCAGCTTTGGCTTCATTTTAATCGCCTCCCTGCTCGATACGCATTGGATGTGAATGTCGACAGGGCAGAAGATGTCCTCACGCATAAGAGATTACTTCAATTGGCTCTGGACCCTGCTAACCGACCTGTATTTGAAATCCGTTCTGTGCAGGTTTATCCTTCTGCTAATGAAAACTTTATCAATTCTTCTTGTTTGGATTCTTCAATGATGGAAGATGCTCAGAGTTCTTTGAACTATTCTAACAGACAGGGGAACCATCCACCTCCAACCTTTGGCTCTTCACCTAATCTTGAAGCCCTTCCATTTCAGGGCTGGAAGTACGGTGTTGAAGATAGGGACAGTGCCCCAAATGTGACACCCTGTTTCTCTCGGCCAATGCATGAGATCACATTTGCAACAAGTGACAAGCCTAAACTCCTTAGTCAGTTAACTTCCTTACTAGCTGATGTTGGACTTAACATACAAGAAGCCCATGCTTTCTCCTCTGTTGATGGTTTCTCTCTGGATGTTTTTGTCATCGATGGTTGGCCTTATGAGGAAACTGAGGAGCTGAAAAGGGTATTAGAAAAAGAAATTTTAAATTTTAAGGAGCAGTGTTGGTCAGAAAAGCAGCCCAGTCCTGCTTTGGGTAAGGATAACCAGAATAGAGTTGAATCTTTCCCTAGTTGTGTTGAAATACCTACTGATGGTACTGATGTCTGGGAAATTGACACCAGACAACTAAAATTTGAGAATAAAGTTGGATCCGGGTCATTTGGGGACCTGTATCGGGGCACATATTGTAGTCAGGAAGTAGCTATTAAAGTACTGAGGCCTGAGCGTATTAATGAAGAGATGCTCAAAGAATTCTCTCAAGAAGTTTATATAATGAGAAAAGTTCGGCACAAAAATGTTGTTCAATTCATTGGTGCTTGTACTAAACCTCCAAACCTCTGCATTGTGACAGAGTTTATGTCGAGAGGAAGTGTATATGACTTCCTTCATAAGCAAAGAGGTGTATTTAACCTTCCATCTCTACTTAAAGTAGCCATTAATATTTCAAGAGGGATGAACTATTTGCATCAAAATAATATAATCCATCGAGACCTCAAGACTGCCAATCTTCTGATGGATGAAAACATGGTTATTGAGCATAAACCATATGACCATAAGGCAGACGTTTTCAGCTTTGGAATAGCCTTATGGGAGCTTTTAACTGGAGAAATTCCTTACTCATCCATGACCCCACTACAAGCAGCGGTTGGCGTGGTCCAGAAGAGACAGCGGCCTACGATACCAAAGAATGTCCATCCCGTTCTTGCTGAACTGCTTGAAAGATGCTGGAGGCATGATCCAACCAAACGGCCAAACTTCTCTGAAATTTTGGAGATCCTCAAGCAGATAGCTGAGCAGGTTGAAAACAACGGGGAAAATCAACGCAAGAAGGATAAATTATCTGGTGCCCTTCAAGAGGGGACACCACTGAACGCACATGAGGAGCTTAGCCAGAGTTGCAATGGTGCTGCTTTGAAGGAGCAATCTTCAACAATCAGACTCTTCACCGTATCCGTTCAGAAGCTGGCGAGCACGAACCCGAACCTGCAAACGAACCAATGCATGCATGAACTGAAGAGCTATGCGTGCCTGCCTCCTCGCGCACACCCCTCGAGCCAGCGCTTGCAGCTTCACCAAGCTTCTTAG | 1848 | 44.48 | MPIEDDVESCGSRATDSSSSHVNPRHHRQKLEVYNEVLRRIQQSNFHEANLPGFDDQLWLHFNRLPARYALDVNVDRAEDVLTHKRLLQLALDPANRPVFEIRSVQVYPSANENFINSSCLDSSMMEDAQSSLNYSNRQGNHPPPTFGSSPNLEALPFQGWKYGVEDRDSAPNVTPCFSRPMHEITFATSDKPKLLSQLTSLLADVGLNIQEAHAFSSVDGFSLDVFVIDGWPYEETEELKRVLEKEILNFKEQCWSEKQPSPALGKDNQNRVESFPSCVEIPTDGTDVWEIDTRQLKFENKVGSGSFGDLYRGTYCSQEVAIKVLRPERINEEMLKEFSQEVYIMRKVRHKNVVQFIGACTKPPNLCIVTEFMSRGSVYDFLHKQRGVFNLPSLLKVAINISRGMNYLHQNNIIHRDLKTANLLMDENMVIEHKPYDHKADVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKRQRPTIPKNVHPVLAELLERCWRHDPTKRPNFSEILEILKQIAEQVENNGENQRKKDKLSGALQEGTPLNAHEELSQSCNGAALKEQSSTIRLFTVSVQKLASTNPNLQTNQCMHELKSYACLPPRAHPSSQRLQLHQAS | 615 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 506616 | 514881 | - | ClCG10G000430.1 | Cla10g00044 | 281703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00044 | 615 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 17 | 430 | - | - | |
Cla10g00044 | 615 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 431 | 532 | - | - | |
Cla10g00044 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 432 | 554 | - | - | |
Cla10g00044 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 376 | 431 | - | - | |
Cla10g00044 | 615 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cla10g00044 | 615 | Coils | Coil | 511 | 531 | - | - | |
Cla10g00044 | 615 | CDD | ACT_TyrKc | 182 | 249 | - | - | |
Cla10g00044 | 615 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 514 | IPR011009 | - | |
Cla10g00044 | 615 | SUPERFAMILY | ACT-like | 182 | 247 | IPR045865 | - | |
Cla10g00044 | 615 | Coils | Coil | 234 | 254 | - | - | |
Cla10g00044 | 615 | ProSitePatterns | Protein kinases ATP-binding region signature. | 303 | 324 | IPR017441 | GO:0005524 | |
Cla10g00044 | 615 | PANTHER | ACT-LIKE TYROSINE KINASE FAMILY PROTEIN | 17 | 430 | - | - | |
Cla10g00044 | 615 | PANTHER | ACT-LIKE TYROSINE KINASE FAMILY PROTEIN | 431 | 532 | - | - | |
Cla10g00044 | 615 | SMART | serkin_6 | 297 | 517 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g00044 | 615 | ProSiteProfiles | Protein kinase domain profile. | 297 | 517 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g00044 | 615 | ProSiteProfiles | ACT domain profile. | 184 | 262 | IPR002912 | - | |
Cla10g00044 | 615 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 414 | 426 | IPR008271 | GO:0004672|GO:0006468 | |
Cla10g00044 | 615 | CDD | STKc_MAP3K-like | 303 | 514 | - | - | |
Cla10g00044 | 615 | Gene3D | Phosphorylase Kinase; domain 1 | 287 | 375 | - | - | |
Cla10g00044 | 615 | Pfam | Protein tyrosine and serine/threonine kinase | 297 | 432 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00400 | Cla-Chr2:3896275 | Cla10g00044 | Cla-Chr10:506616 | 0 | dispersed | |
Cla05g01594 | Cla-Chr5:27021993 | Cla10g00044 | Cla-Chr10:506616 | 0 | dispersed | |
Cla05g01732 | Cla-Chr5:29135626 | Cla10g00044 | Cla-Chr10:506616 | 7.75E-17 | dispersed | |
Cla08g00702 | Cla-Chr8:19267285 | Cla10g00044 | Cla-Chr10:506616 | 1.51E-116 | dispersed | |
Cla10g00044 | Cla-Chr10:506616 | Cla01g02105 | Cla-Chr1:35335976 | 6.09E-61 | dispersed | |
Cla10g00044 | Cla-Chr10:506616 | Cla01g01294 | Cla-Chr1:26249281 | 1.42E-55 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80835 | PF07714 | PK_Tyr_Ser-Thr | 2.00E-37 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00044 | - | - | csv:101220844 | 1030.01 |