Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00051 ATGCTATCAAGCTTGATGAACTTCCTGAGGGCTTGCTGGCAGCCATGTGCCGATCATCTCTTGCGTCGTCGGGGCGGTGGTTCCGATTCGGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCATCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGTCAGCTTGAGTCTGGTCCCTTGAGCTTGCTCGAGTCTGGACCCTATGGAACCTTTATAGGAATATACGATGGCCATGGCGGCCCTGAGACATCACGATTCATATGTGATAACTTGTTCCAGCATCTCAAAGTTGAACCTGCTGCTGACGATTGGGTCATGTTTTCCTCAGTGTTCGCCACAGAAGAAAAGGAAATGTCAGTTAATGTGATAAAAAAAGCATTCCAAGCAACAGAAGAGGGGTTTCTCTCTATTGTCACCAAGCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGCTGTGATTTGTAATGGAAAACTCTACATTGCCAATCTTGGTGATTCCCGAGCTGTGTTGGGAAGGTTAGTTCGGTCCACGGGGGAAGTTCTTCCCATTCAGCTGTCATCGGAGCATAATGTAAGCATACAGTCAGTCCGCCAGGAGATGCAGTCTTTGCACCCAGATGACTCCCACATAGTAGTGCTGAAGCATAATGTATGGCGCGTAAAGGGCTTGATTCAGATTTCTCGGTCAATCGGAGACGTATATCTCAAAAAGCCAGAATTTAACCGGGAGCCTTTGTATGCTAAGTTTCGCCTCCGAGAACCCTTCAGTAGGCCTATTTTGAGCTCAGAACCAGCAGTCTCTGTGCACGAACTAGATACAAATGATCAATTTCTCATATTTGCCTCTGATGGGCTGTGGGAGCACCTTAGCAACCAGGATGCGGTTGATATAGTTCACAAGCATCCTCACAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCGGATTTGAAGAAGATTGACCGTGGAGTTCGGCGCCATTTTCACGACGACACAACGGTGATAGTCGTGTTTCTTGGATCGAGCAGAGGGAGCAGCCCTGGTACAGCAGGGGAAGGGAGCCCTGTTTTGTCTGTGAGAGGGGGAGGAATGAACCTATCTGCAAAATCTCTAGCACCTTGA 1218 48.28 MLSSLMNFLRACWQPCADHLLRRRGGGSDSVGCQDGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFIGIYDGHGGPETSRFICDNLFQHLKVEPAADDWVMFSSVFATEEKEMSVNVIKKAFQATEEGFLSIVTKQWPMNPQIAAVGSCCLVAVICNGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIQSVRQEMQSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYAKFRLREPFSRPILSSEPAVSVHELDTNDQFLIFASDGLWEHLSNQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSRGSSPGTAGEGSPVLSVRGGGMNLSAKSLAP 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 559323 564119 - ClCG10G000490.2 Cla10g00051 281710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00051 405 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
Cla10g00051 405 ProSiteProfiles PPM-type phosphatase domain profile. 50 371 IPR001932 -
Cla10g00051 405 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 6 401 - -
Cla10g00051 405 SMART PP2C_4 42 369 IPR001932 -
Cla10g00051 405 MobiDBLite consensus disorder prediction 375 394 - -
Cla10g00051 405 PANTHER ALPHABET, ISOFORM E-RELATED 6 401 - -
Cla10g00051 405 Gene3D - 40 376 IPR036457 -
Cla10g00051 405 CDD PP2Cc 82 371 IPR001932 -
Cla10g00051 405 Pfam Protein phosphatase 2C 83 340 IPR001932 -
Cla10g00051 405 SUPERFAMILY PP2C-like 62 372 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01181 Cla-Chr2:25301031 Cla10g00051 Cla-Chr10:559323 0 dispersed
Cla02g01350 Cla-Chr2:27751689 Cla10g00051 Cla-Chr10:559323 1.17E-171 dispersed
Cla06g00423 Cla-Chr6:5159093 Cla10g00051 Cla-Chr10:559323 1.16E-148 dispersed
Cla10g00051 Cla-Chr10:559323 Cla10g01967 Cla-Chr10:35506658 1.68E-173 dispersed
Cla01g02007 Cla-Chr1:34701310 Cla10g00051 Cla-Chr10:559323 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00051 K01102 - csv:101220137 729.554