Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00051 | ATGCTATCAAGCTTGATGAACTTCCTGAGGGCTTGCTGGCAGCCATGTGCCGATCATCTCTTGCGTCGTCGGGGCGGTGGTTCCGATTCGGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCATCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGTCAGCTTGAGTCTGGTCCCTTGAGCTTGCTCGAGTCTGGACCCTATGGAACCTTTATAGGAATATACGATGGCCATGGCGGCCCTGAGACATCACGATTCATATGTGATAACTTGTTCCAGCATCTCAAAGTTGAACCTGCTGCTGACGATTGGGTCATGTTTTCCTCAGTGTTCGCCACAGAAGAAAAGGAAATGTCAGTTAATGTGATAAAAAAAGCATTCCAAGCAACAGAAGAGGGGTTTCTCTCTATTGTCACCAAGCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGCTGTGATTTGTAATGGAAAACTCTACATTGCCAATCTTGGTGATTCCCGAGCTGTGTTGGGAAGGTTAGTTCGGTCCACGGGGGAAGTTCTTCCCATTCAGCTGTCATCGGAGCATAATGTAAGCATACAGTCAGTCCGCCAGGAGATGCAGTCTTTGCACCCAGATGACTCCCACATAGTAGTGCTGAAGCATAATGTATGGCGCGTAAAGGGCTTGATTCAGATTTCTCGGTCAATCGGAGACGTATATCTCAAAAAGCCAGAATTTAACCGGGAGCCTTTGTATGCTAAGTTTCGCCTCCGAGAACCCTTCAGTAGGCCTATTTTGAGCTCAGAACCAGCAGTCTCTGTGCACGAACTAGATACAAATGATCAATTTCTCATATTTGCCTCTGATGGGCTGTGGGAGCACCTTAGCAACCAGGATGCGGTTGATATAGTTCACAAGCATCCTCACAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCGGATTTGAAGAAGATTGACCGTGGAGTTCGGCGCCATTTTCACGACGACACAACGGTGATAGTCGTGTTTCTTGGATCGAGCAGAGGGAGCAGCCCTGGTACAGCAGGGGAAGGGAGCCCTGTTTTGTCTGTGAGAGGGGGAGGAATGAACCTATCTGCAAAATCTCTAGCACCTTGA | 1218 | 48.28 | MLSSLMNFLRACWQPCADHLLRRRGGGSDSVGCQDGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFIGIYDGHGGPETSRFICDNLFQHLKVEPAADDWVMFSSVFATEEKEMSVNVIKKAFQATEEGFLSIVTKQWPMNPQIAAVGSCCLVAVICNGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIQSVRQEMQSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYAKFRLREPFSRPILSSEPAVSVHELDTNDQFLIFASDGLWEHLSNQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSRGSSPGTAGEGSPVLSVRGGGMNLSAKSLAP | 405 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 559323 | 564119 | - | ClCG10G000490.2 | Cla10g00051 | 281710 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00051 | 405 | ProSitePatterns | PPM-type phosphatase domain signature. | 84 | 92 | IPR000222 | GO:0043169 | |
Cla10g00051 | 405 | ProSiteProfiles | PPM-type phosphatase domain profile. | 50 | 371 | IPR001932 | - | |
Cla10g00051 | 405 | PANTHER | PROTEIN PHOSPHATASE 2C 60-RELATED | 6 | 401 | - | - | |
Cla10g00051 | 405 | SMART | PP2C_4 | 42 | 369 | IPR001932 | - | |
Cla10g00051 | 405 | MobiDBLite | consensus disorder prediction | 375 | 394 | - | - | |
Cla10g00051 | 405 | PANTHER | ALPHABET, ISOFORM E-RELATED | 6 | 401 | - | - | |
Cla10g00051 | 405 | Gene3D | - | 40 | 376 | IPR036457 | - | |
Cla10g00051 | 405 | CDD | PP2Cc | 82 | 371 | IPR001932 | - | |
Cla10g00051 | 405 | Pfam | Protein phosphatase 2C | 83 | 340 | IPR001932 | - | |
Cla10g00051 | 405 | SUPERFAMILY | PP2C-like | 62 | 372 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01181 | Cla-Chr2:25301031 | Cla10g00051 | Cla-Chr10:559323 | 0 | dispersed | |
Cla02g01350 | Cla-Chr2:27751689 | Cla10g00051 | Cla-Chr10:559323 | 1.17E-171 | dispersed | |
Cla06g00423 | Cla-Chr6:5159093 | Cla10g00051 | Cla-Chr10:559323 | 1.16E-148 | dispersed | |
Cla10g00051 | Cla-Chr10:559323 | Cla10g01967 | Cla-Chr10:35506658 | 1.68E-173 | dispersed | |
Cla01g02007 | Cla-Chr1:34701310 | Cla10g00051 | Cla-Chr10:559323 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00051 | K01102 | - | csv:101220137 | 729.554 |