Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00086 | ATGTCGCCTACTCCCGAGGAACCTAATAATTTGCAGAACGGAATCGAAACCCAACCATACATTTCGCCAGAATCAGATCAGACTAGTGAACCCAGATCAGAGCCAGAACCCACAGCAGATGCAATTCCCAGTTCTGAATTACAACAAGAACGCGAATCGGAATCAGTTAATAATGGAGTAGCGGATTCGGAGCCGGAGTCTCTAAGGAAACAGTTATCGGAGTCCATCCATTTACAGGTAGTGACGGATGTTACAGATCCGAGGTTTGAAGAGCGCAAAGAAACCTCCATCCCATCCAACGGCAACACGGAGAACTCGCAACCTGCGTTGCGTAAAGACGAAGGAAGCCGGACATTTACAATGAGAGAGTTGCTGAATGGTTTGAAAGGTGAAGATGGTAACGACATCCTTAACGAATCTGAAGGCGAGAGGCCCGAAGGGAACTCTGGCTACAGTCTTAATCAAGATAGCCCACATCAGCCTTATTCTGAACAGAGCAGAGCTGCCATGGAGTTGATCAACAGTGTTACAGGCGTCGATGAAGAGGGCCGTTCTCGCCAAAGGATTCTCACATTTGCTGCTAGGAGGTATGCTAGTGCAATTGAGAGAAATGGTCAAGACTATGACGCCCTATACAATTGGGCTTTGGTCCTCCAGGAGAGTGCAGACAATGTTAGTCCAGATTCCACTTCACCTTCTAAAGATGCATTGCTTGAGGAGGCTTGTAAAAAGTATGATGAGGCTACCCGTCTTTGCCCAACACTTCATGATGCTTTTTATAATTGGGCTATTGCAATCTCTGATCGGGCCAAAATGCGTGGTCGTACAAAGGAGGCCGAAGAACTGTGGAAGCAGGCTACCCAAAATTATGAAAAAGCTGTCCAACTCAACTGGAATAGTCCCCAGGCGCTAAATAATTGGGGGCTTGCTCTACAGGAACTCAGTGCGATTGTGCCAGCACGAGAAAAGCAGACAATTGTGAGAACAGCTATCAGTAAGTTCCGTGCTGCTATACAGTTGCAATTTGATTTTCATCGAGCAATCTACAATCTTGGTACTGTTTTGTATGGATTAGCTGAGGACACATTAAGGACTGGTGGAACGGGAAATGTTAAGGATGTTTCCCCTAATGAGTTATACAGCCAATCAGCAATTTATATTGCAGCTGCTCATGCTCTAAAACCAAATTACTCTGTTTACAGCAGTGCCTTGCGGTTGGTCCGTTCGATGCTGCCGTTACCCTATCTAAAAGTTGGATACCTGACTGCACCTCCTCTGGGGAGACCACTTGCTCCTCACAGTGATTGGAAACGTTCACAATTTTTTCTAAATCATGATGTATTGCAAAAGCTTAACTTAGGAGGGGAGCAAATCCAAACATCCCCTAGTATTTTAGGAAGATCCGGTAGTACCTTGAATGGCGACAGGACAATCAAAGTAGAAATTCCTGATATCGTCTCTGTATCAGCATGTGCAGATCTAACTTTACCACCTGGTGCTGGACTCTGCATTGACACAATCCGCGGACCAGTTTTCTTGGTTGCTGACTCCTGGGACGCGCTTGATGGATGGCTTGATGCAATTAGATTAGTTTACACTATCTATGCTCGAGGCAAGAACGAGGTTTTGGCTGGCATCATAGCAGCGTCTGGCGGAGTCGGAGACAGCAGGCGTCAATGGAGGCTTCAGCGGCGGCGTCTGGCGGAGTCGAAGGCAACAGCGTCGCGTCTGCCGGCGTCGAGCGTCGTCGTCGGGGCGGTTATGGGCAGGATGGGAGGAAGGCAAAGGACTTACACCGCTAATTCCAGTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCTACTGTTTTTAGAGCGATCTATACTCCGTCAAATGAAGTCGTCGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTTACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCTTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAAGGGCACATACATCGGGATGTCAAGGCTGGAAATATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCACCGGAGGTATTGCAACCAGGAACTGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATTACAGCTTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAACGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGGTTTCTTTGAAGAAACTATTTGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGAGCTGCAGCTTAAGGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTAAATGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAGTATAAATTCTTGTAGTGTTAAGGATGCCTTCTGTCCTCAAGCTAGTATGAAGAATTTCAATTCATGTAATGAATCATATCAGGATGAGCATGGAGTAGGGGCAAGTGGTCAGGGATTGTCACAAGTAGAGTGCTTGAGCAAAAAGGGAAACTCTATGGAAAGTGATATGCTGAAAGCTGGGTTGCAAGAAAAAACTGGATGGAAGAGAAATGGAACTAGCAATGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGCAAGACCAAAACCCAACTGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGCACTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGCGCCTCTGCAAACAGCCTATCAGCTCCAATTAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCCAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGTCGATCTTCACAGAACTCTCCTCTACGAAAGTCAGCTAGTGTTGGTGATTGGATATTCGATTCCAAGCAGTCTGTCAGCCAACAACCCCCTAAGGAGGCTTGCAACGTCAACGTGCCTACATCAATTCTTTTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAGCAGGATCTTATAGTGAACTTGTTGAATAGCTTACAAGCAGCAGACGTGGTTGATGCTTCTCAAAACGGAAAGTTGCCTCCATTGCCCCGAAGCTCGGAGAATAATGGAAGTGCTGAAACAGCTGCCGTTGAGAGAGAGCGCTTACTGCTTCGGAAAGTCTCTGAACTCCAAGCTAGAATGACGCATTTGACTTATGAATTGACCGCTGAAAAGTTGAAATACATTCAAGTGAGTTGTCCGAACTTTTACTTTCCCTACAACTGA | 3840 | 45.36 | MSPTPEEPNNLQNGIETQPYISPESDQTSEPRSEPEPTADAIPSSELQQERESESVNNGVADSEPESLRKQLSESIHLQVVTDVTDPRFEERKETSIPSNGNTENSQPALRKDEGSRTFTMRELLNGLKGEDGNDILNESEGERPEGNSGYSLNQDSPHQPYSEQSRAAMELINSVTGVDEEGRSRQRILTFAARRYASAIERNGQDYDALYNWALVLQESADNVSPDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATQNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTGNVKDVSPNELYSQSAIYIAAAHALKPNYSVYSSALRLVRSMLPLPYLKVGYLTAPPLGRPLAPHSDWKRSQFFLNHDVLQKLNLGGEQIQTSPSILGRSGSTLNGDRTIKVEIPDIVSVSACADLTLPPGAGLCIDTIRGPVFLVADSWDALDGWLDAIRLVYTIYARGKNEVLAGIIAASGGVGDSRRQWRLQRRRLAESKATASRLPASSVVVGAVMGRMGGRQRTYTANSSDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPEVSLKKLFANLPPLSHRVKELQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNVNDDMAEMKEEEESINSCSVKDAFCPQASMKNFNSCNESYQDEHGVGASGQGLSQVECLSKKGNSMESDMLKAGLQEKTGWKRNGTSNEAEASTSGQDIVQGKTKTQLPKGRQTQSGPLLPGTVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQQPPKEACNVNVPTSILLPHLQNLFHQTSIQQDLIVNLLNSLQAADVVDASQNGKLPPLPRSSENNGSAETAAVERERLLLRKVSELQARMTHLTYELTAEKLKYIQVSCPNFYFPYN | 1279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 867478 | 891804 | + | ClCG10G000820.2 | Cla10g00086 | 281745 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 98 | 113 | - | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 1 | 165 | - | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 1214 | 1233 | - | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 1217 | 1231 | - | - | |
Cla10g00086 | 1279 | ProSitePatterns | Protein kinases ATP-binding region signature. | 611 | 634 | IPR017441 | GO:0005524 | |
Cla10g00086 | 1279 | ProSiteProfiles | Protein kinase domain profile. | 605 | 836 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g00086 | 1279 | Pfam | Protein kinase domain | 670 | 836 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 991 | 1034 | - | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 42 | 64 | - | - | |
Cla10g00086 | 1279 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 590 | 663 | - | - | |
Cla10g00086 | 1279 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 664 | 1269 | - | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 986 | 1080 | - | - | |
Cla10g00086 | 1279 | Gene3D | Tetratricopeptide repeat domain | 298 | 413 | IPR011990 | GO:0005515 | |
Cla10g00086 | 1279 | Gene3D | Tetratricopeptide repeat domain | 179 | 297 | IPR011990 | GO:0005515 | |
Cla10g00086 | 1279 | SMART | serkin_6 | 605 | 836 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g00086 | 1279 | SUPERFAMILY | Protein kinase-like (PK-like) | 603 | 890 | IPR011009 | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 145 | 165 | - | - | |
Cla10g00086 | 1279 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 590 | 663 | - | - | |
Cla10g00086 | 1279 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 664 | 1269 | - | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 1042 | 1066 | - | - | |
Cla10g00086 | 1279 | Gene3D | Phosphorylase Kinase; domain 1 | 594 | 670 | - | - | |
Cla10g00086 | 1279 | Gene3D | Transferase(Phosphotransferase) domain 1 | 671 | 902 | - | - | |
Cla10g00086 | 1279 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Cla10g00086 | 1279 | SUPERFAMILY | TPR-like | 193 | 315 | IPR011990 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02238 | Cla-Chr1:36347624 | Cla10g00086 | Cla-Chr10:867478 | 2.59E-06 | dispersed | |
Cla10g00086 | Cla-Chr10:867478 | Cla10g01223 | Cla-Chr10:26876990 | 1.71E-128 | dispersed | |
Cla10g00086 | Cla-Chr10:867478 | Cla05g00470 | Cla-Chr5:4284570 | 7.86E-83 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80836 | PF00069 | Pkinase | 4.90E-41 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00086 | - | - | csv:101213683 | 1243.41 |