Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00086 ATGTCGCCTACTCCCGAGGAACCTAATAATTTGCAGAACGGAATCGAAACCCAACCATACATTTCGCCAGAATCAGATCAGACTAGTGAACCCAGATCAGAGCCAGAACCCACAGCAGATGCAATTCCCAGTTCTGAATTACAACAAGAACGCGAATCGGAATCAGTTAATAATGGAGTAGCGGATTCGGAGCCGGAGTCTCTAAGGAAACAGTTATCGGAGTCCATCCATTTACAGGTAGTGACGGATGTTACAGATCCGAGGTTTGAAGAGCGCAAAGAAACCTCCATCCCATCCAACGGCAACACGGAGAACTCGCAACCTGCGTTGCGTAAAGACGAAGGAAGCCGGACATTTACAATGAGAGAGTTGCTGAATGGTTTGAAAGGTGAAGATGGTAACGACATCCTTAACGAATCTGAAGGCGAGAGGCCCGAAGGGAACTCTGGCTACAGTCTTAATCAAGATAGCCCACATCAGCCTTATTCTGAACAGAGCAGAGCTGCCATGGAGTTGATCAACAGTGTTACAGGCGTCGATGAAGAGGGCCGTTCTCGCCAAAGGATTCTCACATTTGCTGCTAGGAGGTATGCTAGTGCAATTGAGAGAAATGGTCAAGACTATGACGCCCTATACAATTGGGCTTTGGTCCTCCAGGAGAGTGCAGACAATGTTAGTCCAGATTCCACTTCACCTTCTAAAGATGCATTGCTTGAGGAGGCTTGTAAAAAGTATGATGAGGCTACCCGTCTTTGCCCAACACTTCATGATGCTTTTTATAATTGGGCTATTGCAATCTCTGATCGGGCCAAAATGCGTGGTCGTACAAAGGAGGCCGAAGAACTGTGGAAGCAGGCTACCCAAAATTATGAAAAAGCTGTCCAACTCAACTGGAATAGTCCCCAGGCGCTAAATAATTGGGGGCTTGCTCTACAGGAACTCAGTGCGATTGTGCCAGCACGAGAAAAGCAGACAATTGTGAGAACAGCTATCAGTAAGTTCCGTGCTGCTATACAGTTGCAATTTGATTTTCATCGAGCAATCTACAATCTTGGTACTGTTTTGTATGGATTAGCTGAGGACACATTAAGGACTGGTGGAACGGGAAATGTTAAGGATGTTTCCCCTAATGAGTTATACAGCCAATCAGCAATTTATATTGCAGCTGCTCATGCTCTAAAACCAAATTACTCTGTTTACAGCAGTGCCTTGCGGTTGGTCCGTTCGATGCTGCCGTTACCCTATCTAAAAGTTGGATACCTGACTGCACCTCCTCTGGGGAGACCACTTGCTCCTCACAGTGATTGGAAACGTTCACAATTTTTTCTAAATCATGATGTATTGCAAAAGCTTAACTTAGGAGGGGAGCAAATCCAAACATCCCCTAGTATTTTAGGAAGATCCGGTAGTACCTTGAATGGCGACAGGACAATCAAAGTAGAAATTCCTGATATCGTCTCTGTATCAGCATGTGCAGATCTAACTTTACCACCTGGTGCTGGACTCTGCATTGACACAATCCGCGGACCAGTTTTCTTGGTTGCTGACTCCTGGGACGCGCTTGATGGATGGCTTGATGCAATTAGATTAGTTTACACTATCTATGCTCGAGGCAAGAACGAGGTTTTGGCTGGCATCATAGCAGCGTCTGGCGGAGTCGGAGACAGCAGGCGTCAATGGAGGCTTCAGCGGCGGCGTCTGGCGGAGTCGAAGGCAACAGCGTCGCGTCTGCCGGCGTCGAGCGTCGTCGTCGGGGCGGTTATGGGCAGGATGGGAGGAAGGCAAAGGACTTACACCGCTAATTCCAGTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCTACTGTTTTTAGAGCGATCTATACTCCGTCAAATGAAGTCGTCGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTTACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCTTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAAGGGCACATACATCGGGATGTCAAGGCTGGAAATATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCACCGGAGGTATTGCAACCAGGAACTGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATTACAGCTTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAACGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGGTTTCTTTGAAGAAACTATTTGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGAGCTGCAGCTTAAGGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTAAATGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAGTATAAATTCTTGTAGTGTTAAGGATGCCTTCTGTCCTCAAGCTAGTATGAAGAATTTCAATTCATGTAATGAATCATATCAGGATGAGCATGGAGTAGGGGCAAGTGGTCAGGGATTGTCACAAGTAGAGTGCTTGAGCAAAAAGGGAAACTCTATGGAAAGTGATATGCTGAAAGCTGGGTTGCAAGAAAAAACTGGATGGAAGAGAAATGGAACTAGCAATGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGCAAGACCAAAACCCAACTGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGCACTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGCGCCTCTGCAAACAGCCTATCAGCTCCAATTAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCCAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGTCGATCTTCACAGAACTCTCCTCTACGAAAGTCAGCTAGTGTTGGTGATTGGATATTCGATTCCAAGCAGTCTGTCAGCCAACAACCCCCTAAGGAGGCTTGCAACGTCAACGTGCCTACATCAATTCTTTTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAGCAGGATCTTATAGTGAACTTGTTGAATAGCTTACAAGCAGCAGACGTGGTTGATGCTTCTCAAAACGGAAAGTTGCCTCCATTGCCCCGAAGCTCGGAGAATAATGGAAGTGCTGAAACAGCTGCCGTTGAGAGAGAGCGCTTACTGCTTCGGAAAGTCTCTGAACTCCAAGCTAGAATGACGCATTTGACTTATGAATTGACCGCTGAAAAGTTGAAATACATTCAAGTGAGTTGTCCGAACTTTTACTTTCCCTACAACTGA 3840 45.36 MSPTPEEPNNLQNGIETQPYISPESDQTSEPRSEPEPTADAIPSSELQQERESESVNNGVADSEPESLRKQLSESIHLQVVTDVTDPRFEERKETSIPSNGNTENSQPALRKDEGSRTFTMRELLNGLKGEDGNDILNESEGERPEGNSGYSLNQDSPHQPYSEQSRAAMELINSVTGVDEEGRSRQRILTFAARRYASAIERNGQDYDALYNWALVLQESADNVSPDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATQNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTGNVKDVSPNELYSQSAIYIAAAHALKPNYSVYSSALRLVRSMLPLPYLKVGYLTAPPLGRPLAPHSDWKRSQFFLNHDVLQKLNLGGEQIQTSPSILGRSGSTLNGDRTIKVEIPDIVSVSACADLTLPPGAGLCIDTIRGPVFLVADSWDALDGWLDAIRLVYTIYARGKNEVLAGIIAASGGVGDSRRQWRLQRRRLAESKATASRLPASSVVVGAVMGRMGGRQRTYTANSSDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPEVSLKKLFANLPPLSHRVKELQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNVNDDMAEMKEEEESINSCSVKDAFCPQASMKNFNSCNESYQDEHGVGASGQGLSQVECLSKKGNSMESDMLKAGLQEKTGWKRNGTSNEAEASTSGQDIVQGKTKTQLPKGRQTQSGPLLPGTVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQQPPKEACNVNVPTSILLPHLQNLFHQTSIQQDLIVNLLNSLQAADVVDASQNGKLPPLPRSSENNGSAETAAVERERLLLRKVSELQARMTHLTYELTAEKLKYIQVSCPNFYFPYN 1279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 867478 891804 + ClCG10G000820.2 Cla10g00086 281745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00086 1279 MobiDBLite consensus disorder prediction 98 113 - -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 1 165 - -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 1214 1233 - -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 1217 1231 - -
Cla10g00086 1279 ProSitePatterns Protein kinases ATP-binding region signature. 611 634 IPR017441 GO:0005524
Cla10g00086 1279 ProSiteProfiles Protein kinase domain profile. 605 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00086 1279 Pfam Protein kinase domain 670 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00086 1279 MobiDBLite consensus disorder prediction 991 1034 - -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 42 64 - -
Cla10g00086 1279 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 590 663 - -
Cla10g00086 1279 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 664 1269 - -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 986 1080 - -
Cla10g00086 1279 Gene3D Tetratricopeptide repeat domain 298 413 IPR011990 GO:0005515
Cla10g00086 1279 Gene3D Tetratricopeptide repeat domain 179 297 IPR011990 GO:0005515
Cla10g00086 1279 SMART serkin_6 605 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00086 1279 SUPERFAMILY Protein kinase-like (PK-like) 603 890 IPR011009 -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 145 165 - -
Cla10g00086 1279 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 590 663 - -
Cla10g00086 1279 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 664 1269 - -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 1042 1066 - -
Cla10g00086 1279 Gene3D Phosphorylase Kinase; domain 1 594 670 - -
Cla10g00086 1279 Gene3D Transferase(Phosphotransferase) domain 1 671 902 - -
Cla10g00086 1279 MobiDBLite consensus disorder prediction 1 34 - -
Cla10g00086 1279 SUPERFAMILY TPR-like 193 315 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02238 Cla-Chr1:36347624 Cla10g00086 Cla-Chr10:867478 2.59E-06 dispersed
Cla10g00086 Cla-Chr10:867478 Cla10g01223 Cla-Chr10:26876990 1.71E-128 dispersed
Cla10g00086 Cla-Chr10:867478 Cla05g00470 Cla-Chr5:4284570 7.86E-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80836 PF00069 Pkinase 4.90E-41 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00086 - - csv:101213683 1243.41