Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00141 ATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAGAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAGCTTGATGACGATAGCTGCAACAGCACTGGCTCGGATGCCCCTTCTTCAGTAGCACAAGACCGGATGATCATTGTTGGGAATCAGCTCCCTATTCGAGCGAATCGAGATGAGAATGGAGATTGGGGGTTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGACTTGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAGGAGGTTGATCCAAGGGAGCAAGATGATGTTGCACAAATTCTTTTGGACCGATTCAAGTGTGTCCCGACGTTCCTTCCTCCCGAGCTTTTTACTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCACTGTTTCACTATATGCTTCCCCTGTCACCGGATCTTGGTGGCAGATTTGATCGGTCTCTTTGGCAAGCATATCTTTCGGTGAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGTCCTGATGACGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGTGAAGCTTGGATTCTTCCTACACAGTCCATTTCCTTCATCTGAGATTTATCGGACCCTTCCCGTTAGAGACGAACTTCTTCGGGCACTATTGAACTCTGACCTTATTGGCTTCCACACGTTTGATTATGCTAGGCATTTTTTATCTTGCTGCAGCAGAATGCTTGGTCTGTCTTATCAATCTAAGCGAGGTTACATCGGGCTTGAATACTATGGTCGTACTGTGAGCATCAAGATTCTTCCTGTCGGTATTCATATAGGCCAGCTCCAAAATGTTTTGAATCTCCCCGAGACTGTATCCAAAGTCGCAGAATTGCAAGAGCGGTTCAAGGGTCAAACTGTTTTGCTTGGGGTTGATGATATGGACATATTTAAGGGGATCAGCCTGAAACTTTTGGCATTTGAACAATTGCTCCGACAACATCCTGAGAGATGGGGCAAAGCTGTGTTAGTACAGATTGCGAACCCTGCAAGAGGCAGAGGGAAAGATGTGCAGGAGGTTGTGGCTGAAACCACAGCGACAGTGGATAGAATTAATACAACATTTAGAAGGCCAGGATATGAGCCTGTGGTTTTGATAAACACTCCCTTGCAGTTTTACGAGCGAATTGCTTACTATGCAATTGCTGAGTGCTGCCTTGTTACTGCAGTGAGAGATGGGATGAATCTTATACCTTATGAGTATATTATATGTCGGCAAGGCAATGAGAAGCTTGACGATGTTCTCGGGCTAAATCCTTCAACTGCAAAGAAGAGCATGTTAGTGTTGTCTGAGTTTATTGGGTGTTCCCCATCCCTCAGTGGAGCTATTCGGGTTAACCCATGGAATATTGAAGCTGTCACCGAGGCAATGGATTCTGCCCTGGTAATCCCTGAGGCAGAAAAGCAATTGCGACATGAAAAGCATTATAGGTATGTTAGTACGCATGATGTTGCATATTGGGCACGCAGCTTTTTGCAGGATCTGGGCAGGGCCTGTAGAGACCATTCAATGAGGAGGTGCTGGGGCATAGGTTTTGGTTTAGGATTTCGAGTTATTGCCCTGGATCCAGATTTTAGGAAGCTTTCAGTTGATCATATTGTTTCAGTGTATAAGAGAACCTGCCACCGAGCAATTTTGTTAGATTATGATGGTATCATGATGCTTCCTGGATCAATTAGCATGAATCCAACTTCAGAAGCCCTTGGAATCTTGAACAACTTGTGTAAAGATCCTAAAAATGTTGTGTTCCTTGTTAGCGGAAAGGACCGAAAAACTCTGACCGAATGGTTTTCACCGTGCGAAAAGCTTGGACTAGCTGCAGAACATGGTTTTTATCTTAGGCCAAATCATACTGCAGACTGGGAGACATGTGTAGCTGTGACGGATTTTGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACCGAGACAACTGATGGCTCTACAATCGAAACTAAAGAGAGTGCGCTTGTTTGGAACTACCTTTACGCAGATCCTGATTTCGGGTCGTGCCAGGCCAAGGAACTTTTAGATCACCTGGAAAGCGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGCATTGTAGCAGAATATCTCTTGCAAACAATGAGGGAGAGGGGAATGCTTCCCGATTTCGTTCTATGCATTGGAGACGACAGGTCAGACGAGGACATGTTCGAGGTGATAATGAATGCAAAAGCCACCCTTTCTCCCGGTGCCGAAGTATTCGGTTGTACCGTTGGCCAGAAACCAAGCAAGGCCAGGTATTACTTAGAAGACACACACGAAATCTTGAGAATGTTACAAGGTCTTACCCATGCGTCCGAGCATGCGACTAGAGCTGCTCTGCAGACGACAGCTCGTAGAGTGGTAATTGCAGAGAGTAAATAA 2595 44.66 MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSCNSTGSDAPSSVAQDRMIIVGNQLPIRANRDENGDWGFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQILLDRFKCVPTFLPPELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQERFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVVAETTATVDRINTTFRRPGYEPVVLINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDDVLGLNPSTAKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPDFRKLSVDHIVSVYKRTCHRAILLDYDGIMMLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNHTADWETCVAVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMRERGMLPDFVLCIGDDRSDEDMFEVIMNAKATLSPGAEVFGCTVGQKPSKARYYLEDTHEILRMLQGLTHASEHATRAALQTTARRVVIAESK 864
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 1490923 1495240 + ClCG10G001420.1 Cla10g00141 281800
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00141 864 CDD HAD_TPP 595 831 - -
Cla10g00141 864 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Cla10g00141 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Cla10g00141 864 Gene3D Glycogen Phosphorylase B; 56 314 - -
Cla10g00141 864 SUPERFAMILY HAD-like 594 839 IPR036412 -
Cla10g00141 864 TIGRFAM T6PP: trehalose-phosphatase 593 840 IPR003337 GO:0003824|GO:0005992
Cla10g00141 864 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 596 798 IPR006379 -
Cla10g00141 864 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 846 - -
Cla10g00141 864 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Cla10g00141 864 Pfam Trehalose-phosphatase 597 829 IPR003337 GO:0003824|GO:0005992
Cla10g00141 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Cla10g00141 864 Gene3D - 723 854 IPR023214 -
Cla10g00141 864 Gene3D - 593 710 IPR023214 -
Cla10g00141 864 Gene3D Glycogen Phosphorylase B; 315 531 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00681 Cla-Chr3:8237610 Cla10g00141 Cla-Chr10:1490923 1.24E-145 dispersed
Cla05g02526 Cla-Chr5:36613469 Cla10g00141 Cla-Chr10:1490923 0 dispersed
Cla06g01651 Cla-Chr6:30009658 Cla10g00141 Cla-Chr10:1490923 0 dispersed
Cla07g00244 Cla-Chr7:2689452 Cla10g00141 Cla-Chr10:1490923 0 dispersed
Cla10g00141 Cla-Chr10:1490923 Cla11g01682 Cla-Chr11:30400639 1.13E-135 dispersed
Cla10g00284 Cla-Chr10:3750012 Cla10g00141 Cla-Chr10:1490923 5.31E-06 dispersed
Cla10g00141 Cla-Chr10:1490923 Cla01g02336 Cla-Chr1:37151668 0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00141 K16055 - csv:101207192 1707.19