Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00175 ATGCAGAAGAGCTTATTCCGGGTCGGCGCTCCGCTCGTCGTTCTTGGCGGAATCAGAGGTTTTTCAGAGCAGAAAGCTCCATTTCTTCACTCCGTTGACTCCCTGGTTATCGAAAATTTTGTTCAGAATAGACCAGCATTATGGAAGAAATCCTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATGTTAAAAAAGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTACTATGAACAAATAGAAAACTATAATCAGCCATTTCTTGATGTGTTGAGTGAATATGACGATGGTCGCGATCTTTCTAATTATGATTTTGATCAAGATGGTTTTGGTCCACCATGTGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGTTATAGCCAATAAGTACAGAGAGGGCCTGCAGAATATCTTTGATCAACAGAAGATGAAGCTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACTGATAGATGGTTTTCCTCAGCACGAGCTTTCTTGGAGGAGTGTTCATTTTCAGATAAACGACCACTTGCTTCTGCTGATCAGACACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATGTCTTAGTGACTTCTGGTGCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGACTTGATCATCTAATAACACCTGGAAATGTCTACAGTTCATGGGAAGTAGGCAAACTACAATGTTTCCAGTGGATCAAGGAGCGTTTTGACAAGTCAAATGTTCGTTTCTGCGCAATAGGCGATGGATGGGAAGAGTGTGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGATCTGCAACCTGGAAGTCCTCACAGTACTAACTCCCATAAACCTACATTTACTGCAAGCTGCAGAGTTCTTCAATATCCAGAGATGGTAGGAAAGAAGACAAAGCACGATGTCGTCTTTGCCTGA 1002 41.22 MQKSLFRVGAPLVVLGGIRGFSEQKAPFLHSVDSLVIENFVQNRPALWKKSLLNGTYAEAFCGSKDVKKGEELGKIWEKQILDLCDHHFYYEQIENYNQPFLDVLSEYDDGRDLSNYDFDQDGFGPPCDDGNKRKLAFRQRVIANKYREGLQNIFDQQKMKLWEELYEMTDVYTDRWFSSARAFLEECSFSDKRPLASADQTRNSTSRSSQHVNVLVTSGALIPSLVKCLLFRLDHLITPGNVYSSWEVGKLQCFQWIKERFDKSNVRFCAIGDGWEECEAAQSLKWPFVKIDLQPGSPHSTNSHKPTFTASCRVLQYPEMVGKKTKHDVVFA 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1866817 1873047 - ClCG10G001750.2 Cla10g00175 281834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00175 333 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 50 303 - -
Cla10g00175 333 Gene3D - 47 300 IPR038102 -
Cla10g00175 333 TIGRFAM EYA-cons_domain: EYA conserved domain 50 303 IPR006545 GO:0007275
Cla10g00175 333 PANTHER EYES ABSENT 50 303 IPR028472 GO:0004725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00175 - K17620 csv:101203755 477.633