Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00177 ATGTGTAAGTTCGAATCAAATGTGATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTCAAGCCGGAGACTCGCCCCGCCGCTCTTCCCGCCGACAATTCCGACATCCTCTTCTCCGCTTCCGAGCCACTTGACGAAACCCTAGGCCATTCCTTCTGCTACGTCCGCTCTTCCAACCGTTTCCTCTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCTCTTCGTTTTTCCCCTCCCCACGAACCACCACTCGGTTCTAGGACTAGAACTGGCCCGCCGGAGACTGCCTTCAAGGCCATCTCGGGCGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTCTTATGCTTGATGCTGTTTACGACGATGCCACTGACACTACGCTTGGGGCTTCTGGTGGTGGTTGTGGAGTCAGAGGGAGTATTCTTAATGGCTTTGAGAGTACTTCTTCTTTTACTGCTCTTCCGCTTCAGCCCGTCCCCAGAGGTGGGACTGAGCCTTTGGAACGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCGCTGTCTGGTCCGCTCGATGCTAATGTTGATGGTGCTGGTGCTGGTGGTGCTGGCGCCGGCGCTGGTGGTGGCAGTGGCGGTGGTGGGAGAGTCCATTTCTCCGCTCCGCTTGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGAGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCAGATAAGCGACCGTGGGTGGTGCCGGTGTTGAATTTCGTTGGCCGGAAGGAGAGCTCGACGGCGGGAGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCACTTGGGAAGGCTGGAGAGGATCGGGTACATGTGGTTGTATCGGAAGAGCAAGGGTGGTTGTTCGTTGGAATTTATGATGGGTTCAATGGCCCGGATGCGCCTGAATTCTTGATGGGTAATCTCTACAGAGCTGTCTTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGACGATAATGAGGAGGCTGCGGCTGCTGCTAATTCGAACCCTTCGAATGTGGCTGAAGAGAGCACAGTCGGTGCGAACGAAACTAATGCTGACCCGTCCTCAAGAGCCGCTGGTCAAACCGTTGAAACTAACGGGAATGTTTCAGTAGTTGGAAATGAAGCGGAAGTGGAACAACCGGCTGCTGATCGAGGATCAGCAAAGAGGGTTACGTTTCAATCAGAGGATGTACCGGAGAACAGGCGGAGGCGGCGACTGTGGGAGTATTTAGCGGAGGACGATACACAGGAAGGACTTGATCTCTCGGGGTCAGATAGGTTTGCATTTTCTGTTGATGACGCTCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGTTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTCATGTTAAGACTTTGTTCCCGTGGAAGTATGGTTTGGGAGATAAAGAGAAGGCTGAGGCTGAGAATAGGGTGGAGGAGACATCATATCGAAGTGGTAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGTTGGTGTTGGGGGCATTGTCACGGGCTCTTGAGATAACTGAATTAGCATATTTGGACATGACAGATAAGTTGCTTGATACGAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTGCTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATCTGGGTGACAGCCGTGCAATTGTAGCACAGTATGAGCAACAAGAAGTTGGGCCTAGTGAAGACATGAAGGAGGTGGGCCTCAAAAGAACGGGCATGGAGGGTATAATTGAGGAGTCTACAACAAGTGAAGGGAAAATAACTCAAACGAATCAACCTTCAGCTCAGACGACGAGATTGACTGCATTGCAGCTATCCACTGATCATAGCACAAGCATTGAAGAAGAAGTAAGAAGAATAAAGAACGAGCACCCTGATGACAAACAGTGCATCGTCAACGATAGAGTGAAGGGCCGTCTAAAGGTTACGAGGGCATTTGGTGCAGGATTTTTGAAACAGCCAAAATTGAATGATGCATTACTGGAAATGTTTCGGAATGAGTATATTGGTACCGCACCATATTTATCATGCTTGCCTTCTCTTCGTCACCATAGACTCTGCCCGACGGATCAATTCATAGTGCTGTCATCTGATGGATTGTATCAATACCTAACCAATGAAGAAGTGGTTTCTTATGTTGAGAACTTTATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGTGATTTCTTTTCCAAGGTCAGTTCTCATTCAGGATCAGTGTCAATGTTTATGCTTTGCAGGAATGGATTTTCATGAATTGTTGGACATACCACAGGGCGATCGAAGAAAGTATCATGATGATGTTACTGTTATGACACCTTCTACAAGGAAGAGGACAGCATTTTTGCATAGGCAAGTTTATCCACATGAGAAGCAAATGAATTGGCTAGTCCTTGAGAAAATCTGTGAGTTCCTGCACCGGTTTGAGCTGATAACAACTCAGGTAATGTTTCTTCTCGTTGTACGATTTTTGTCAGAGTTATCATCCATTCTTCAAGTGCAGTTTGAGCTGCACCTACTGATAGAGATCGAACATCCAGACACCATTCAGCTTCGGTTTTGTTGTGCCTGGGTACAATCCGTACAAACTTCCCAAGTAGAGCAATTCATGAGCTCTCTCGCGAAGATTTTGGTTTCGACATATATCAATCAAGCAATTGCAGAAAGGCCGTCGGGCTTCAGTGGCTGTCTCACCGAGAATGTTTCTGAATTCATCTTTGACAACTTCGAAGCACTGAATCAAACAAGTGCAACACATCACATTAATCTCAACACCCAACTCGAGCATTTCTTCAAACAACTCCATGGATCTTTTTACATTACCTCCGCTGCCATGTATATTCAACATTGCTGTGTAACTCCAACTATCTGGCCTAGAACGCTCCGACTTCTTCATCTCTTCAAAGAGTTTCTCAGCTTCCTCCTCCAAACCAAGATCTGCACACATATTCAACAATGTATTATACAGAATGAAGTCCATTGGCCACCCATTCGACCTCATCCGCTCCCACAAATTCTGGGTCTTAATCCAATTGAAGAACAAATGGGTTTTCTGCCATGGCCTCAAGCTATTGAGAATAAGAAGGGCATTTTCTTTAGTGGGTGGATGAGGGATTTCCTCAAGAGCCGCCATGAAAGAAGCTTCATCAGAGGAATCACAGGCATTGAGCTTATGGGCGAAGGATTTAAGGTCTCGCATCTGGGGGTTATAAGAGTAAGAAGAACGTTTTTGCCTGTGGAGAGAGAGAACCGAGCGTTTGGGCTTGGTGGGGTTAACCCAAATAAGAGATGGGTTTGGTCGTTTGGTGCATTGGAAAGCGTGGTTGTGGAGAGATTTTTGAGCTGCTCGGATAGAGATGGGTTTTTGTTGTCGGTCGATTCTGATGAAATTGGAGAAGCTCTTCGAGGGGATTTGGAGGAGGAGGAACAGAGGACTGTTAATCGTTTGGTGAAACTGTTCCGGGGGAGAGGGGAAGTGAAGAAGATGGGGGTTGGTTTGAGATTGAGATCGAGAGAGGAAGAAAGAGGAGCCGCCATGGGAGAGAGCTTAACTTTGGAGAAAGAAATATCTGAAGAGGAGATGGGTCATCGCAGGCAGTGCCTTATCCCATTCCCAAATACAAAAATATCAATGGAAAGGACGGACCGTTGGCAGTGGCAGCCGAGAACTTGA 3831 47.35 MCKFESNVMGSGVSSLFSCLKPETRPAALPADNSDILFSASEPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHEPPLGSRTRTGPPETAFKAISGASVSANSSIPRSVLMLDAVYDDATDTTLGASGGGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGAGAGGAGAGAGGGSGGGGRVHFSAPLGGMYVKKKRKKSISGFRKAFTRNFSDKRPWVVPVLNFVGRKESSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAAAAANSNPSNVAEESTVGANETNADPSSRAAGQTVETNGNVSVVGNEAEVEQPAADRGSAKRVTFQSEDVPENRRRRRLWEYLAEDDTQEGLDLSGSDRFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGHVKTLFPWKYGLGDKEKAEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQEVGPSEDMKEVGLKRTGMEGIIEESTTSEGKITQTNQPSAQTTRLTALQLSTDHSTSIEEEVRRIKNEHPDDKQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCLPSLRHHRLCPTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAVISFPRSVLIQDQCQCLCFAGMDFHELLDIPQGDRRKYHDDVTVMTPSTRKRTAFLHRQVYPHEKQMNWLVLEKICEFLHRFELITTQVMFLLVVRFLSELSSILQVQFELHLLIEIEHPDTIQLRFCCAWVQSVQTSQVEQFMSSLAKILVSTYINQAIAERPSGFSGCLTENVSEFIFDNFEALNQTSATHHINLNTQLEHFFKQLHGSFYITSAAMYIQHCCVTPTIWPRTLRLLHLFKEFLSFLLQTKICTHIQQCIIQNEVHWPPIRPHPLPQILGLNPIEEQMGFLPWPQAIENKKGIFFSGWMRDFLKSRHERSFIRGITGIELMGEGFKVSHLGVIRVRRTFLPVERENRAFGLGGVNPNKRWVWSFGALESVVVERFLSCSDRDGFLLSVDSDEIGEALRGDLEEEEQRTVNRLVKLFRGRGEVKKMGVGLRLRSREEERGAAMGESLTLEKEISEEEMGHRRQCLIPFPNTKISMERTDRWQWQPRT 1276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1883487 1894377 - ClCG10G001820.2 Cla10g00177 281836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00177 1276 MobiDBLite consensus disorder prediction 349 382 - -
Cla10g00177 1276 Pfam Protein phosphatase 2C 641 774 IPR001932 -
Cla10g00177 1276 PANTHER PROTEIN PHOSPHATASE 2C 29 29 782 - -
Cla10g00177 1276 SUPERFAMILY PP2C-like 287 824 IPR036457 -
Cla10g00177 1276 ProSiteProfiles PPM-type phosphatase domain profile. 275 828 IPR001932 -
Cla10g00177 1276 MobiDBLite consensus disorder prediction 348 382 - -
Cla10g00177 1276 MobiDBLite consensus disorder prediction 72 94 - -
Cla10g00177 1276 CDD PP2Cc 520 777 IPR001932 -
Cla10g00177 1276 Gene3D - 261 830 IPR036457 -
Cla10g00177 1276 SMART PP2C_4 275 826 IPR001932 -
Cla10g00177 1276 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Cla10g00177 1276 PANTHER PROTEIN PHOSPHATASE 2C 29 782 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00112 Cla-Chr4:3307796 Cla10g00177 Cla-Chr10:1883487 1.81E-26 dispersed
Cla04g00806 Cla-Chr4:23116963 Cla10g00177 Cla-Chr10:1883487 2.72E-36 dispersed
Cla05g00646 Cla-Chr5:6027129 Cla10g00177 Cla-Chr10:1883487 2.36E-14 dispersed
Cla10g00177 Cla-Chr10:1883487 Cla01g02007 Cla-Chr1:34701310 1.11E-33 dispersed
Cla10g00177 Cla-Chr10:1883487 Cla02g01969 Cla-Chr2:34757872 7.70E-47 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00177 - - bhj:120092087 1480.31