Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00225 TCATATTTTGACGACGCGGTGTCGATCAGCTACCGGAAGAACATCAATTGTGGAGGGGAGAGCCATTCTGAATGTCGCGTTCTGATTTCATCACGACAACCAATTTCTCCTACTGTTCAACGTTTCTTCAATTCTGAAGTCCTCAGAATTTCAATTGAGTTCGCTCGCCACTTCCATGGAGTTTTATCAGATGTCCCCGTGGGGACAAAGAGGAAAGACTTTTGGATATTATTTGGGATGAACTGTGTTAGTGTTTCTGAAGTTGGTGTCCCCGCTGCAATCGCATCTGGGTTATTGTTATTTTCAAGGGTTGGGCCCGCGGATGTACCCACTGAAGCTGGTGCCCCTGCTGCAATCACATCTGGGTTATTGTTATTTTCGGGGGCTGGGCCCGCCGATGTACCCACTGAAGCTAGTGCCACATTCGAGGGCCCCGCTCCCTCCACACTGGGAATCACCGAAGAGGCAACGACAGCTGAAGATAGTCTCCTAATATATTGCAAACCGGTTGAACTATACAACATTCTTCATCTTCGTTCCCTTAACAATCCTTCTTTTCTTCGACGTTGTTTGCATTACAAGTTACAAGCTAGGCGAAAAGAGAGGGTGAGCACTGGAGTTGTAATTTTCAACTATAGGGACTACAACAACATAGTTCGAAAAACTGAAGTGACTGAAGACTTCTCATGTCCATTTTGTTTGATGCTATGCGCAAGCTTTAAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTGACTGAAGAATATCAGGCGGTGAATGTCTCTGTGAAAATTGATGTCTTTAGATCTGAGACTGTAGCAGATGGAGTGGACCCACAACTACAAACTTTCTTCTTCTGCACAAGACCACGAAAGCGCAAGTTAAAGAACTCTATGCAGAATGGGAAGTATGTGCAGTTTTTGGAGATGGACTCACCTGGACCTGCCACAGAAGGCATGCACAAGGGATTTGTCGGGCATAACGCTGATGGTGTATCCTGTGAAAAAGAGGGGAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGACGGAGAAAATATTGGCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCTGGTGTCTCAATGGCTATCAATCAATCTTCTACAGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACAGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAACGGCAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCTCTAGATAAAGTACTATCCGACAAAGATAGTGAGGACGAAGTAGATGATGACATTGCAGATTTCGAAGACCGAAGGATGCTCGATGATTTCGTGGATGTCACCAGAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCGTGGGCATGTGAAGCATTCTCAAAACTTCATGGGAAAGAGCTTATCTCATCTCCGCCTCTCTTTTGGTGTTGGAGACTATTCATGATCAAGCTCTGGAATCATGGTCTTCTTGATGCATCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTTAAAGATGAGAGTTTGAATGCGACGAAAAACTGTAGAGGAGATGACGATTAG 1728 44.62 SYFDDAVSISYRKNINCGGESHSECRVLISSRQPISPTVQRFFNSEVLRISIEFARHFHGVLSDVPVGTKRKDFWILFGMNCVSVSEVGVPAAIASGLLLFSRVGPADVPTEAGAPAAITSGLLLFSGAGPADVPTEASATFEGPAPSTLGITEEATTAEDSLLIYCKPVELYNILHLRSLNNPSFLRRCLHYKLQARRKERVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKGLRYHLCSSHDMFNFEYWVTEEYQAVNVSVKIDVFRSETVADGVDPQLQTFFFCTRPRKRKLKNSMQNGKYVQFLEMDSPGPATEGMHKGFVGHNADGVSCEKEGSHSFPIETYLQNAQQDGENIGPECPSSMECIERVASSSNIPGVSMAINQSSTGPECYKVLSGSDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTRDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELISSPPLFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKDESLNATKNCRGDDD 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2640081 2659637 + ClCG10G002390.1 Cla10g00225 281884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00225 575 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 202 566 - -
Cla10g00225 575 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 153 205 - -
Cla10g00225 575 PANTHER POLYCOMB GROUP PROTEIN 202 566 - -
Cla10g00225 575 PANTHER POLYCOMB GROUP PROTEIN 153 205 - -
Cla10g00225 575 Pfam VEFS-Box of polycomb protein 424 553 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01626 Cla-Chr7:33593292 Cla10g00225 Cla-Chr10:2640081 1.11E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00225 - - csv:101204149 831.632