Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00229 | ATGATGTACGAACAGAGTAATGGCTGTGAATCCGATTTTGTTCTTTTGGAAACCATACGGCGCCATTTGTTGGGAGAATCCGACGCTTACCGATGTGGGAATTTCGCCCTGGCCGGAACCGCCTCGCCGGTTTTCTGCCGGAGCTCTAGTTTCGGCAGCTTGTACCCTTGTTTGACTGAAAATTGGGGCGATTTGCCTCTAAAAGAGGATGATTCCGAGGACATGGTCATCGCCGGCGTCCTCCGTGATGCCGTCAGTGTTGGTTGGGTTCCGTCGCTCGGCGCTTCGCCGTCGGATGCCTTCAATTTTGGGTTCTCCGATGTCAAGCCGGAGCCGGAGATTCTCCCGCCGGTGAACATATTGCCGGAAGTTAAGGTGGCGGCGGCGGCGGCGGCGACGCCGTTGCCGGCGGTGGTTCCGGCGAAGGGGAAGCATTACCGGGGTGTCCGGCAGCGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGAGACCCAGCAAAAAACGGAGCTCGGGTTTGGCTTGGAACGTTTGAGACGGCGGAGGATGCGGCACTTGCTTATGACCGCGCCGCTTACCGAATGCGTGGCTCGAAAGCTCTTCTCAATTTCCCACTTCGAGTTAATTCGGGCGAACCCGACCCGGTTAGAGTGACATCGAAACGGTCATCGCCTCGATCGTCGCCAGAGCCTACTTCATCTTTGTCGTCGGTAGAGAGTGGGTCCCCTAAGCGGAGGAAGAAGGCGGACGGCACGGCAGTGACACCCGCTCTAGCTTCGCCGGAGTTGATTCAATTGGTGGTGGGGACCAGTGAATTGCAAGTGGAAGTTGGCGTGGCAAAGTGA | 840 | 57.74 | MMYEQSNGCESDFVLLETIRRHLLGESDAYRCGNFALAGTASPVFCRSSSFGSLYPCLTENWGDLPLKEDDSEDMVIAGVLRDAVSVGWVPSLGASPSDAFNFGFSDVKPEPEILPPVNILPEVKVAAAAAATPLPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSKALLNFPLRVNSGEPDPVRVTSKRSSPRSSPEPTSSLSSVESGSPKRRKKADGTAVTPALASPELIQLVVGTSELQVEVGVAK | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2697300 | 2698139 | - | ClCG10G002440.1 | Cla10g00229 | 281888 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00229 | 279 | MobiDBLite | consensus disorder prediction | 214 | 238 | - | - | |
Cla10g00229 | 279 | CDD | AP2 | 144 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Cla10g00229 | 279 | Gene3D | AP2/ERF domain | 144 | 206 | IPR036955 | GO:0003700|GO:0006355 | |
Cla10g00229 | 279 | SUPERFAMILY | DNA-binding domain | 145 | 205 | IPR016177 | GO:0003677 | |
Cla10g00229 | 279 | PRINTS | Ethylene responsive element binding protein signature | 146 | 157 | IPR001471 | GO:0003700|GO:0006355 | |
Cla10g00229 | 279 | PRINTS | Ethylene responsive element binding protein signature | 169 | 185 | IPR001471 | GO:0003700|GO:0006355 | |
Cla10g00229 | 279 | PANTHER | DNA-BINDING DOMAIN | 41 | 258 | IPR044808 | GO:0003700|GO:0009873 | |
Cla10g00229 | 279 | SMART | rav1_2 | 145 | 209 | IPR001471 | GO:0003700|GO:0006355 | |
Cla10g00229 | 279 | MobiDBLite | consensus disorder prediction | 210 | 252 | - | - | |
Cla10g00229 | 279 | Pfam | AP2 domain | 145 | 195 | IPR001471 | GO:0003700|GO:0006355 | |
Cla10g00229 | 279 | ProSiteProfiles | AP2/ERF domain profile. | 145 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Cla10g00229 | 279 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED | 41 | 258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02292 | Cla-Chr1:36785133 | Cla10g00229 | Cla-Chr10:2697300 | 3.89E-34 | dispersed | |
Cla05g00009 | Cla-Chr5:144835 | Cla10g00229 | Cla-Chr10:2697300 | 2.04E-29 | dispersed | |
Cla07g01621 | Cla-Chr7:33565079 | Cla10g00229 | Cla-Chr10:2697300 | 1.79E-45 | dispersed | |
Cla09g00719 | Cla-Chr9:7061163 | Cla10g00229 | Cla-Chr10:2697300 | 3.14E-29 | dispersed | |
Cla10g00229 | Cla-Chr10:2697300 | Cla10g00230 | Cla-Chr10:2726599 | 1.14E-30 | tandem | |
Cla01g00429 | Cla-Chr1:4669402 | Cla10g00229 | Cla-Chr10:2697300 | 3.04E-101 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61822 | PF00847 | AP2 | 1.20E-14 | CL0081 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00229 | K09286 | - | csv:101203663 | 436.032 |