Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00285 ATGTCATCTTCTTCGATTCCTAACACTTTCTCTCAAGTTCCTCCTCCTCTTCTTCCTCCTCCTTCTTCCGAGCAGCTTTGCTATGTCCATTGTAACATTTGCGACACCGTTTTAGCGGTGAGTGTTCCTTGTAGTAGTTTGTTCAAAAGGGTCACCGTTCGTTGTGGCTATTGCGCCAATCTTCTGCCGGTGAACATGTGTGGTGGCATGCTTCTCCCTTCTTCAAATCAGTTTCATGGCTTTGCTCACTCAACCCCTAACTTTCTCTCTCCCAATACTCACAATTTCTTGGAAGAGATCTCAAATTCAAATCCAAATCCAAATCCAAATTTTCTGATGAACCAAGCAGAAGGAATTGATTTAACCATGGCCACTCGTGTAGCTAATGATCTTCCAAGGCAGCCTCCAAGCATAAATAGACAGAAAATTAATGAAGAAAGAAAAGGGAAAAAAATGCCTTTGGATAAAGCTACTTTGGGGAGGAGATCCAACGGATTAAGGCTGCCAATCCAGACATATCTCATAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCCCACTTCCCTCACATTCATTTTGGTTCTTCTTCCTGAGGTATCAAACTGGCAAAAAGACAAACATGCTTGA 630 42.86 MSSSSIPNTFSQVPPPLLPPPSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLPVNMCGGMLLPSSNQFHGFAHSTPNFLSPNTHNFLEEISNSNPNPNPNFLMNQAEGIDLTMATRVANDLPRQPPSINRQKINEERKGKKMPLDKATLGRRSNGLRLPIQTYLIEKPSVLLLRIGPTSLTFILVLLPEVSNWQKDKHA 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3758007 3762131 - ClCG10G003000.2 Cla10g00285 281944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00285 209 MobiDBLite consensus disorder prediction 140 157 - -
Cla10g00285 209 MobiDBLite consensus disorder prediction 130 160 - -
Cla10g00285 209 PANTHER PROTEIN YABBY 6-RELATED 1 144 IPR006780 GO:0007275
Cla10g00285 209 PANTHER PROTEIN YABBY 4-LIKE 1 144 - -
Cla10g00285 209 Pfam YABBY protein 22 101 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g00368 Cla10g00285 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00285 Cla-Chr10:3758007 Cla11g00285 Cla-Chr11:3276437 2.14E-15 dispersed
Cla01g00368 Cla-Chr1:4042952 Cla10g00285 Cla-Chr10:3758007 5.31E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61829 PF04690 YABBY 1.30E-25 CL0114 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00285 K25796 - csv:101219601 230.72