Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00337 ATGTGGCTTCTTTTGATTGGAGCTATTGTTGTTTTAAGTTTTACACACTGGCTTTATAGTTGGAGAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGTTTGCCCTTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCTTTCATTAGAAAAAGAATGGATAGGTATGGACCTATATTCAGAACAAGTTTGGTGGGAAGACCGCTGATTGTCTCAACAGACCCCGACTTGAATTACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCATTGCACGGCTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCTCATGACTCAGTTGAATTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCAGAGAATTTGAGAGAGAACTTTGTTGCATTCATACAAGGCTTGATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGTAGGAAAAGAGCAATGAGGATGCTGAAGAACATGTTACAAGAAAGGCGGACAAATCCAAGGAAACAACAAATTGATTTTTTCGATTTTGTTCTTGAAGAACTGGAGAAAGATGGAACTCTTCTCACTGAGGAAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTTGAAACTACTTCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGTCTGTTCAATTTGGAGAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGTTTGCCCTTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCTTTCATTAGAAAAAGAATGGATAGCTTTGAAACTACTTCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGCTGAACATGAGGGAATATTGAAGAGAAGGGAAAATCCAGATGCTGGGCTTACATGGGGGGAATACAAATCCATGACGTTCACATTTCAGTTTATCAATGAAACTGTTAGACTGGCAAATATAGTTCCAGGCATCTTTCGAAAAGCACTAAAAGACATCCAGTTTAAGGGATATACTATCCCATCTGGTTGGGCTGTTATGGTCTGCCCTCCAGCTGTGCACTTAAATCCAGAAAAATACATCGACCCCCTTGCTTTTAACCCATGGCGATGGGAGAAATCTGAACTGAATGGAGCCTCTAAACATTTCATGGCTTTTGGTGGTGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTGCAAATGGCTGTTTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGGGGCAACATCGTTCGAACTCCCGGTTTACAGTTTCCCAATGGCTTTCACGTTCAGATAATGGAGAAATAG 1635 40.8 MWLLLIGAIVVLSFTHWLYSWRNPKCNGKLPPGSMGLPLLGETLQFFAPNTSSDIPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATRRLRQWSSHDSVELKDKTASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYNKCLQGRKRAMRMLKNMLQERRTNPRKQQIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTVCSIWRNPKCNGKLPPGSMGLPLLGETLQFFAPNTSSDIPPFIRKRMDSFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKRRENPDAGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKALKDIQFKGYTIPSGWAVMVCPPAVHLNPEKYIDPLAFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPNGFHVQIMEK 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4377400 4381383 - ClCG10G003570.1 Cla10g00337 281996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00337 544 Pfam Cytochrome P450 354 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 Pfam Cytochrome P450 31 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 8 307 - -
Cla10g00337 544 PANTHER CYTOCHROME P450 26 8 307 - -
Cla10g00337 544 SUPERFAMILY Cytochrome P450 355 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 SUPERFAMILY Cytochrome P450 27 305 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PANTHER CYTOCHROME P450 26 309 355 - -
Cla10g00337 544 PANTHER CYTOCHROME P450 26 354 541 - -
Cla10g00337 544 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS E-class P450 group I signature 450 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 PRINTS E-class P450 group I signature 363 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 Gene3D Cytochrome P450 22 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00337 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Cla10g00337 544 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 309 355 - -
Cla10g00337 544 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 354 541 - -
Cla10g00337 544 Gene3D Cytochrome P450 348 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00146 Cla-Chr6:1671231 Cla10g00337 Cla-Chr10:4377400 5.34E-15 dispersed
Cla10g00337 Cla-Chr10:4377400 Cla10g01250 Cla-Chr10:27307443 3.03E-128 dispersed
Cla10g00337 Cla-Chr10:4377400 Cla05g01495 Cla-Chr5:24133776 1.34E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00337 - - egr:104443773 746.503