Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00384 ATGTCAAAAGGTCCTCTCAATGTTAGTTTCAATAGTGCAAGAGACCAAGAAGGCCATGGTTCACACACTTTGTCCACAGCCGGAGGCAACTTTGTCCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTCTTGCTGCCTACAAGGTTTGCTGGCCTTCATCTAGTGGCGGCTGTTTCGATGCTGATATCCTAGCCGGTTTCGAAGCTGCCATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTTGGTACCGCAGCTCAAGAGTTTGCTTATGACGCCGTTTCGATAGGGGCATTCCATGCCGTTCAACAAGGAATTGTTGTGGTTTGCTCGGGTGGAAATGATGGCCCGGCTCCTGGAACTATAAGCAATGTTTCTCCTTGGATGTTCACTGTTGCAGCTAGTTCCATCGATCGAGACTTTGTCAGTTATGTCGCTCTCGGAAACAAGAAGCATATCAAGAGAAATGAGTTTTTCCGACAGTAA 516 48.84 MSKGPLNVSFNSARDQEGHGSHTLSTAGGNFVPGANIFGYGNGTAKGGSPKARLAAYKVCWPSSSGGCFDADILAGFEAAISDGVDVLSVSLGTAAQEFAYDAVSIGAFHAVQQGIVVVCSGGNDGPAPGTISNVSPWMFTVAASSIDRDFVSYVALGNKKHIKRNEFFRQ 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5156734 5157850 + ClCG10G004075.1 Cla10g00384 282043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00384 171 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 3 161 - -
Cla10g00384 171 Pfam Subtilase family 11 148 IPR000209 GO:0006508|GO:0008236
Cla10g00384 171 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 161 IPR045051 -
Cla10g00384 171 MobiDBLite consensus disorder prediction 1 26 - -
Cla10g00384 171 ProSiteProfiles Serine proteases, subtilase domain profile. 1 171 - -
Cla10g00384 171 Gene3D - 148 166 - -
Cla10g00384 171 Gene3D Peptidase S8/S53 domain 9 147 IPR036852 GO:0004252|GO:0006508
Cla10g00384 171 SUPERFAMILY Subtilisin-like 8 161 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00384 Cla-Chr10:5156734 Cla02g00312 Cla-Chr2:3021280 2.44E-72 dispersed
Cla10g00384 Cla-Chr10:5156734 Cla10g00388 Cla-Chr10:5273841 4.45E-73 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00384 - - csv:101212014 298.13