Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla10g00388 | ATGAATCAATCAAAAACTATGGATGCCTTCAATCTTTCTTCAATCCTTTTGATATCTCTTCTTCTCACTTTGTTGCAAACATCCACCATTGCCACCAAAAAGCCTTACATTGTTTATTTGGGGTCACATTCTCACGGTTCGAGTTCTTCGTCGTTAGATCATCGACGTGCAACCGTGTCTCATTATGATTTATTGGGATCAGTGTTAAGAAGCAAAAAGATAGCCAAAGAAGCTATTTTGTACTCATACAACAAGAACATCAATGGCTTTGCTGCCATGCTTGATGAAAAGCAAGCAGCAGATGTTGCAAAATTTCCGAATGTTGTTTCGGTTTTCGAAAGTCAAGCAAAAAAATTACATACAACACAATCATGGCACTTCCTTGGAATAGAAAAACATGAAGAAATTCCTCTCAACTCCATTTGGAATGCTGCAAAATTTGGTGATGATATAATCATAGCTAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAATGATGAAGGGTATGGACCTGTCCCCACAAGGTGGAAGGGAACTTGTCAAAGTGATGCAGACCCCAAGTTCCATTGTAACAGAAAATTGATTGGATCAAGATTCTTCAACATAGGCTATGGTGAACTTAGTGCTACCTTCAATTCTTCAAGAGACAATGTAGGCCATGGAACCCACACTTTATCCATAGCTGGTGGCAATTTTGTCTCTGGAGCTAATGTTTTGGGAATGGGGAACGGAACTATTAAAGGTGGCTCCCCTCGAGCCCGTGTTGCGTCCTACAAGGTTTGTTGGCCAGAAGAAAACGGCGAGTGTTTGGACCCAAATACCTTAGCTGCTTTTGAAGCTGCAATTGACGATGGCGTTGATGTTATCTCAATTTCTGTCGGTGGAGAGCCAAAGGAGTTTTTTAGTGATGCACTCTCTGTAGGAGCTTTCCATGCAGTTGAGCGAGGTATTGTTGTTGTTTGCTCGGCTGGGAACATCGGACCAACTCCTGGGACCGTATCAAATGTGTCGCCATGGATTATAACTGTTGGCGCTAGTTCCATCAATAGGGATTTCACCAATTTTGTGGTCCTGGGGAACAAGAAGAAACTCAAGGGCACAAGCTTTTCTTCTAAGGCAATGCCATTTAACAAGTTCTACCCTCTAATCAATGCTGTGGATGCAAAAGCCAACAATGTCTCCAATAGTGATGCGGAAGTTTGTGAGGAGGGCTCGCTTGATCCCATGAAGTTAACAGGGAAGATTGTGATTTGCCTTCGAGGGGGTCTTCCAAGAGTGTCTAAGGGTTATGTAGCTGCCAAGGCAGGGGCTGTTGGAATGATTTTGGTTAACGATGAGGAAAGTGGAAATGCAATTTTAACTGATATACATATCCTTCCAGCTTCCCATGTAACCTATAATGACAGCATATCCATCTTCCAGTACATCAATTCTACAAAGACACCAACGGCTTACATTAGTTCTGTGATGACAGAACTGGAAATCAAACCATCCCCACTAATGGCTGATTTCTCATCAAGAGGCCCCAATACAATAGAGGAGTCAATCCTTAAGCCTGATATAACAGCTCCAGGTGTGAATATACTGGCGGCTTACCCCGATGGAGTACCATTGACAGAACTACCATTGGACAATCGTCAAGCTCCTTTCAAGGTAGATTCTGGCACATCCATGGCCTGTCCCCATGTTGCTGGCATTGTAGGCCTTCTCAAAATCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACGACAGCCAAAACAACGGACAACAGTTTACATCCAATTATGGACTCCACAGGACTCAAAGCAACTCCATTGGCATACGGTGCAGGACATGTTAATCCAAACAGTGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTCAATTTCTTGTGTGCTCGAGGCTACAATGCAACACAAATCAAGAAAATATCCAAGAAGACCTTCGTTTGCGATGGATCGTTCAAAGTGACGGATTTGAATTACCCTTCGATCTCAGTTATAGATCTGAAAATGGGACCTGTGACGATCAATCGAAAAGTGAAGAATGTGGGAAGTCCGGGGATGTATGTCGCTCGAGTGAAGGCGCCACTGGAAGTTTCTATCATCGTTGAGCCAAGTAGATTGCATTTTACGGCCATGGATGAAGAGAAGAGCTTCAAGGTCGTGTTGAATAGCAGTGGAAAGGGCAACGAACAAGGTTATGTGTTTGGGGAATTAGTATGGTCTGATGGCAAACACTATGTTAGGAGTCCAATTGTTGTGAATTTAGGGGAATAG | 2319 | 43.29 | MNQSKTMDAFNLSSILLISLLLTLLQTSTIATKKPYIVYLGSHSHGSSSSSLDHRRATVSHYDLLGSVLRSKKIAKEAILYSYNKNINGFAAMLDEKQAADVAKFPNVVSVFESQAKKLHTTQSWHFLGIEKHEEIPLNSIWNAAKFGDDIIIANFDTGVWPESKSFNDEGYGPVPTRWKGTCQSDADPKFHCNRKLIGSRFFNIGYGELSATFNSSRDNVGHGTHTLSIAGGNFVSGANVLGMGNGTIKGGSPRARVASYKVCWPEENGECLDPNTLAAFEAAIDDGVDVISISVGGEPKEFFSDALSVGAFHAVERGIVVVCSAGNIGPTPGTVSNVSPWIITVGASSINRDFTNFVVLGNKKKLKGTSFSSKAMPFNKFYPLINAVDAKANNVSNSDAEVCEEGSLDPMKLTGKIVICLRGGLPRVSKGYVAAKAGAVGMILVNDEESGNAILTDIHILPASHVTYNDSISIFQYINSTKTPTAYISSVMTELEIKPSPLMADFSSRGPNTIEESILKPDITAPGVNILAAYPDGVPLTELPLDNRQAPFKVDSGTSMACPHVAGIVGLLKILNPKWSPAAIKSAIMTTAKTTDNSLHPIMDSTGLKATPLAYGAGHVNPNSAMDPGLVYDITIDDYLNFLCARGYNATQIKKISKKTFVCDGSFKVTDLNYPSISVIDLKMGPVTINRKVKNVGSPGMYVARVKAPLEVSIIVEPSRLHFTAMDEEKSFKVVLNSSGKGNEQGYVFGELVWSDGKHYVRSPIVVNLGE | 772 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 5273841 | 5277647 | - | ClCG10G004120.2 | Cla10g00388 | 282047 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla10g00388 | 772 | Pfam | Peptidase inhibitor I9 | 36 | 120 | IPR010259 | - | |
| Cla10g00388 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 558 | 568 | IPR023828 | - | |
| Cla10g00388 | 772 | Gene3D | Peptidase S8/S53 domain | 150 | 640 | IPR036852 | GO:0004252|GO:0006508 | |
| Cla10g00388 | 772 | Pfam | Subtilase family | 148 | 605 | IPR000209 | GO:0006508|GO:0008236 | |
| Cla10g00388 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 557 | 573 | IPR015500 | - | |
| Cla10g00388 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 148 | 167 | IPR015500 | - | |
| Cla10g00388 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 219 | 232 | IPR015500 | - | |
| Cla10g00388 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 124 | 627 | - | - | |
| Cla10g00388 | 772 | Gene3D | - | 644 | 770 | - | - | |
| Cla10g00388 | 772 | CDD | PA_subtilisin_like | 359 | 489 | - | - | |
| Cla10g00388 | 772 | Gene3D | - | 352 | 496 | - | - | |
| Cla10g00388 | 772 | Pfam | Fibronectin type-III domain | 672 | 768 | IPR041469 | - | |
| Cla10g00388 | 772 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 34 | 772 | - | - | |
| Cla10g00388 | 772 | SUPERFAMILY | PA domain | 411 | 482 | IPR046450 | - | |
| Cla10g00388 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 23 | 120 | IPR037045 | - | |
| Cla10g00388 | 772 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 34 | 772 | IPR045051 | - | |
| Cla10g00388 | 772 | SUPERFAMILY | Subtilisin-like | 120 | 631 | IPR036852 | GO:0004252|GO:0006508 | |
| Cla10g00388 | 772 | CDD | Peptidases_S8_3 | 117 | 593 | IPR034197 | - | |
| Cla10g00388 | 772 | Pfam | PA domain | 404 | 471 | IPR003137 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla01g01131 | Cla-Chr1:18797760 | Cla10g00388 | Cla-Chr10:5273841 | 1.91E-31 | dispersed | |
| Cla01g02353 | Cla-Chr1:37274403 | Cla10g00388 | Cla-Chr10:5273841 | 0 | dispersed | |
| Cla02g00312 | Cla-Chr2:3021280 | Cla10g00388 | Cla-Chr10:5273841 | 0 | dispersed | |
| Cla07g00629 | Cla-Chr7:11999095 | Cla10g00388 | Cla-Chr10:5273841 | 1.27E-162 | dispersed | |
| Cla08g01069 | Cla-Chr8:23380913 | Cla10g00388 | Cla-Chr10:5273841 | 1.02E-163 | dispersed | |
| Cla10g00367 | Cla-Chr10:4911015 | Cla10g00388 | Cla-Chr10:5273841 | 2.51E-25 | dispersed | |
| Cla10g00383 | Cla-Chr10:5153729 | Cla10g00388 | Cla-Chr10:5273841 | 3.12E-11 | dispersed | |
| Cla10g00388 | Cla-Chr10:5273841 | Cla02g01160 | Cla-Chr2:24979009 | 0 | dispersed | |
| Cla10g00384 | Cla-Chr10:5156734 | Cla10g00388 | Cla-Chr10:5273841 | 4.45E-73 | proximal | |
| Cla10g00387 | Cla-Chr10:5265365 | Cla10g00388 | Cla-Chr10:5273841 | 5.70E-169 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla10g00388 | - | - | cmo:103491006 | 1167.14 |