Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00420 ATGCATGAGGTAATCAACCTGAAGAAACAGCAGAACAAATTAACCTCAGAAACTAAACTACAAAACCATAGTAAGATCAGAAGCAGAACAATGAAAAGATGCTTGGTTCAGCAAATAAATCAGATGTTAGGTTCTTCCATCGGAATAAGGACGACGGCGACGGTGGCGAAGAAGTCGACGATAACGGCGGCTGAGAGACGGCAAAGTTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCACCTCCGCGATGGCGTTATCGGCCTCACCAAAGAGCTCGGAGTTCCTTCCTCGAGCGCCGGCGCCGTAATTTACAACAATCCAATCGGATTCTACGACGCCGATGCCAACATCACTGCCTCCTTCTCTACAAGATTCTCTTTCTCCATCACCAACATTAACCCCACTTCCTCCGGCGATGGCCTTTCCTTTTTCCTCTCCCCCGATAACCAAACCCTCGGCAGCCCCGGTGGGTATTTGGGTCTCGTCAATTCTTCCCAATTGACCAAGAACAAGTTTCTGGCGGTTGAATTTGATACACGGCTTGATTCTGTCTTCAACGATCCTAATGCCCACCATGTTGGCTTCGACATTGAGAGCTTGATTTCGATCAAGACGGCTAACCCTGCTTCTCAAGGTGTAAATCTCAAGAGTGGGAAGTCGATTACGGCTTGGATTGAGTACAAGAATGAGGAAAATAGGCTGAGGGTCTTCTTGAGTAATTCTGGTTTGAAACCTTCCAAGGCGCTTCTCGACCTCGGTGTCGATCTTTCGAACTATCTTAAGGAGGTTATGTATGTCGGGTTTTCCGGTTCGACTGAAGGGAGTACTGAGCTTCATTTGATTGAGAGTTGGAGTTTTAATACTTCTGGGTTTGTACCTGCTAGGCCTAGATTTAACCCTCATAATGTTTCTGATAGCTCTGTGATTGTCTCACCTAATATTTCTATATCTGATTCTGGTAATGCTCATCACAATAGACTCGGGTTGGGTCTCGGGATCGCCGGGCCGGCTTTCTTTTGTGCCGTGATTGTTGTGTTTGGTTTCTTTTCACTTGAGAAATGGAGAAAGATTAGGGCTCAGAAAAGCATAAAGGCAGAGCTTTTGACAGGTCCAAGAGAGTTTAGTTATAGAGAACTAAAGACGGCCACAAAAGGATTTCATTCCAGTAGGATCGTTGGCAATGGGGCTTTTGGGACAGTCTATAAAGCTTTTTTCATCTCATCCGGAACCATTTCTGCGGTTAAAAGATCGAAGCATTCTCACGAAGGGAAGACCGAGTTCCTAGCCGAGTTGTCGATCATAGCTCGGTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGCGTTGAGAAAGGTGAATTGCTTCTCGTTTATGACTTTATGCCGAACGGGAGCCTTGATAGGCTGCTTTACCAAGAATCTGGAGAAGCTAGCTTGTTAAACTGGTCTCACAGATACAATGTTGCTGTTGGATTGGCATCTGTGCTGACATATCTACATCAGGAATGTGAGCAGCAAGTCATCCACAGAGATATAAAGACGGGTAACGTACTGCTGGACGGGAACTTCAATGCAAGATTGGGCGATTTTGGATTGGCGAAGCTCATGGATCATGACAAGAGCCCGGTTTCGACTCTAACTGCAGGAACAATGGGATACCTTGCACCTGAGTATCTTCAATATGGGAAAGCGACTGAGAAAACTGACGTCTTCAGCTATGGAGTGGTTATCCTTGAAGTGACGTGTGGGAGGAGGCCGATTGAAAGAGAACCAGGTACTCAAAAGATGGTCAATCTGGTAGATTGGGTTTGGGGATTGCATTCTCAAGGCAAGATCATTGAAGCAGCTGATAAAAGGTTGAACGGAGAGTTCAGGGAAGAAGAAATGAGGAAGCTCTTACTTGTCGGACTGAGCTGTGCAAACCCGGATAGCTCGGCAAGACCTTCGATGAGGAAGGTCCTACAGATTCTCAACAATGAGGCAGAGCCAGTGTTCGTACCAAAAATGAAGCCTAGTCTTACATTTTCTTGTGGCTTTTCACTGACTGTGGATGACATTATAATAGAGGAAGAAAGTGGAGGAAAGTGGGAATCTTCAAAGACAACCATTGTCCAAATAGACTGA 2136 45.83 MHEVINLKKQQNKLTSETKLQNHSKIRSRTMKRCLVQQINQMLGSSIGIRTTATVAKKSTITAAERRQSSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGAVIYNNPIGFYDADANITASFSTRFSFSITNINPTSSGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFLAVEFDTRLDSVFNDPNAHHVGFDIESLISIKTANPASQGVNLKSGKSITAWIEYKNEENRLRVFLSNSGLKPSKALLDLGVDLSNYLKEVMYVGFSGSTEGSTELHLIESWSFNTSGFVPARPRFNPHNVSDSSVIVSPNISISDSGNAHHNRLGLGLGIAGPAFFCAVIVVFGFFSLEKWRKIRAQKSIKAELLTGPREFSYRELKTATKGFHSSRIVGNGAFGTVYKAFFISSGTISAVKRSKHSHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDRLLYQESGEASLLNWSHRYNVAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVTCGRRPIEREPGTQKMVNLVDWVWGLHSQGKIIEAADKRLNGEFREEEMRKLLLVGLSCANPDSSARPSMRKVLQILNNEAEPVFVPKMKPSLTFSCGFSLTVDDIIIEEESGGKWESSKTTIVQID 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5652017 5661567 - ClCG10G004440.2 Cla10g00420 282079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00420 711 SUPERFAMILY Protein kinase-like (PK-like) 372 683 IPR011009 -
Cla10g00420 711 SMART serkin_6 389 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00420 711 Gene3D Transferase(Phosphotransferase) domain 1 465 680 - -
Cla10g00420 711 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 61 681 - -
Cla10g00420 711 Gene3D - 67 298 - -
Cla10g00420 711 Pfam Protein kinase domain 389 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00420 711 ProSitePatterns Legume lectins beta-chain signature. 176 182 IPR019825 -
Cla10g00420 711 CDD STKc_IRAK 395 663 - -
Cla10g00420 711 ProSitePatterns Protein kinases ATP-binding region signature. 395 418 IPR017441 GO:0005524
Cla10g00420 711 SUPERFAMILY Concanavalin A-like lectins/glucanases 69 297 IPR013320 -
Cla10g00420 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Cla10g00420 711 PANTHER - 61 681 - -
Cla10g00420 711 CDD lectin_legume_LecRK_Arcelin_ConA 69 293 IPR001220 GO:0030246
Cla10g00420 711 ProSiteProfiles Protein kinase domain profile. 389 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00420 711 Pfam Legume lectin domain 70 296 IPR001220 GO:0030246
Cla10g00420 711 Gene3D Phosphorylase Kinase; domain 1 353 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00731 Cla-Chr4:22323911 Cla10g00420 Cla-Chr10:5652017 1.62E-11 dispersed
Cla08g00674 Cla-Chr8:19024253 Cla10g00420 Cla-Chr10:5652017 1.39E-155 dispersed
Cla10g00420 Cla-Chr10:5652017 Cla10g01941 Cla-Chr10:35253192 0 dispersed
Cla10g00786 Cla-Chr10:15494984 Cla10g00420 Cla-Chr10:5652017 1.91E-86 dispersed
Cla10g01674 Cla-Chr10:32450064 Cla10g00420 Cla-Chr10:5652017 4.80E-20 dispersed
Cla10g00420 Cla-Chr10:5652017 Cla10g02025 Cla-Chr10:36020308 7.57E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80841 PF00069 Pkinase 6.30E-50 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00420 - - csv:101209797 1189.48