Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00433 | ATGGACCCCACTGACTCCGACCTCGCCGATCCATCTCATGCCTCCTCCTCCGCTGGCGCTAAGTACAAGCTCATGTCTCCGGCCAAGCTTCCGATCTCTAGGTCCCCTTGCATTACTATCCCTCCTGGCCTCAGCCCCACTTCCTTTCTCGACTCTCCTGTTCTGCTTACCAACTTGAAGGTAGAGCCTTCTCCGACTACTGGGTCCTTTACCAAGCTTCCGATGGCACATGACTCTTCTAGCTCAGCTATTTATCCAGTGACCACCATGGCCTTCTCAAATACTAATGCTTCAGATGAAGGAAGATCCAACTACTTCGAGTTCAAACCATATGTTGGACCAAATATGGTTCCTGCAGATTTGAGTCATAGGAAATGTGAACAATCTTCTGAAGTTCAAGTTCAAGGTCAACCTCAACCATTTACTGCTCCACCCATGACTAAAATTGAGATCAATGTCGTTTCAAATGATTTGAGCCGATCAACCCAGATGGATACACATCCAGTTGGCTCAGGGCCTAGTGCTCCTGAAGCCGATGGAGATGATATCAGCCATAGTTTGAACACAAATAGCAGGGTTCAGGCTCCACAATCTGATCCAAAAGGCAGTGGCATTCCAGTGGTTTCAGATAGGTTGTCTGATGATGGATATAACTGGCGGAAGTATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCTCGTAGCTATTATAAATGTACCCATCCTAACTGTGAAGTGAAAAAGCTCTTTGAACGCTCCCATGATGGGCAAATAGCTGATATTATCTATAAGGGTACCCACGATCATCCTAAGCCTCAGCCAAGCCGGCGATATTCTGCCAGTGCTTCTGTGAATGTTCAAGAAGATGGGCCTGATAAGCCTTCACCTTTAACTGGCCAAGATGACAGATTGTTCAGCATGTATGCTCAGACAGTTCATAACCTTGAGCCAAATGGAACTACAGAACCATCACTGGCCGCAAACGATAGCATCAATGAAGGTGCAGGAACAACTCTGCCATGCAAGAATCAGGATGAGGTTGATGACGATGACATATTCTCGAAGCGGAGGAAAATAGAACTTGGTGGTTTCGATGTCTGCCCAATGGTTAAACCAATCAGGGAACCACGTGTTGTGGTTCAAACTCTAAGTGAGGTAGATATACTGGATGACGGGTATCGCTGGCGCAAATATGGCCAGAAGGTAGTGAGAGGAAATCCCAACCCAAGGAGTTATTACAAATGCACAAATGTTGGATGCCCTGTTAGAAAACATGTCGAAAGAGCATCCCATGACCCGAAAGCTGTTATAACTACATATGAGGGGAAACATAATCACGATGTTCCCACTGCAAAAACTAGTAGCCATGATGTCGGGGGTCCATCGACAATTGCACCATCGAGGTATAGACTCGAGGAGAGCGACACCATAAGCCTTGATCTTGGCGTTGGCATTGGCACTGGCACGGGTGGTGAGAATAGATCAAATGATTACAGGCAGGCATTGCATTCACAACTTGTTGAAAACCAAACTCCAAATGGCAATTTCAACTTTGAAGTAGTTCAAGAGAACTCAGCCCCGACCTATTTCGGTGTGATCAATAGAGGTATAAATCAACATGGATCGAGAGAGAGTTTGAGTGAAAGCCACAATAAGGAGATTGCTCCGCTAAATCATTCGTCTCACCCATATCCGACGAGCATTGGGAGAATACTAACAGGGCCTTAA | 1728 | 45.95 | MDPTDSDLADPSHASSSAGAKYKLMSPAKLPISRSPCITIPPGLSPTSFLDSPVLLTNLKVEPSPTTGSFTKLPMAHDSSSSAIYPVTTMAFSNTNASDEGRSNYFEFKPYVGPNMVPADLSHRKCEQSSEVQVQGQPQPFTAPPMTKIEINVVSNDLSRSTQMDTHPVGSGPSAPEADGDDISHSLNTNSRVQAPQSDPKGSGIPVVSDRLSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQIADIIYKGTHDHPKPQPSRRYSASASVNVQEDGPDKPSPLTGQDDRLFSMYAQTVHNLEPNGTTEPSLAANDSINEGAGTTLPCKNQDEVDDDDIFSKRRKIELGGFDVCPMVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKTSSHDVGGPSTIAPSRYRLEESDTISLDLGVGIGTGTGGENRSNDYRQALHSQLVENQTPNGNFNFEVVQENSAPTYFGVINRGINQHGSRESLSESHNKEIAPLNHSSHPYPTSIGRILTGP | 575 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5809593 | 5815229 | - | ClCG10G004600.2 | Cla10g00433 | 282092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 183 | 198 | - | - | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 551 | 567 | - | - | |
Cla10g00433 | 575 | SUPERFAMILY | WRKY DNA-binding domain | 210 | 272 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cla10g00433 | 575 | Gene3D | WRKY domain | 376 | 442 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | Pfam | WRKY DNA -binding domain | 390 | 446 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | Pfam | WRKY DNA -binding domain | 214 | 270 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | Gene3D | WRKY domain | 207 | 273 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 264 | 301 | - | - | |
Cla10g00433 | 575 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 11 | 550 | IPR044810 | GO:0003700 | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 315 | 339 | - | - | |
Cla10g00433 | 575 | ProSiteProfiles | WRKY domain profile. | 208 | 272 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 11 | 550 | - | - | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 315 | 346 | - | - | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 541 | 575 | - | - | |
Cla10g00433 | 575 | ProSiteProfiles | WRKY domain profile. | 384 | 449 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | SUPERFAMILY | WRKY DNA-binding domain | 381 | 449 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | SMART | WRKY_cls | 389 | 448 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | SMART | WRKY_cls | 213 | 271 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 161 | 214 | - | - | |
Cla10g00433 | 575 | MobiDBLite | consensus disorder prediction | 445 | 467 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g00374 | Cla-Chr10:5003276 | Cla10g00433 | Cla-Chr10:5809593 | 5.01E-99 | dispersed | |
Cla10g00376 | Cla-Chr10:5037257 | Cla10g00433 | Cla-Chr10:5809593 | 1.89E-99 | dispersed | |
Cla10g00433 | Cla-Chr10:5809593 | Cla11g00430 | Cla-Chr11:4957420 | 8.99E-18 | dispersed | |
Cla03g00015 | Cla-Chr3:176047 | Cla10g00433 | Cla-Chr10:5809593 | 1.55E-13 | transposed | |
Cla03g01024 | Cla-Chr3:19476497 | Cla10g00433 | Cla-Chr10:5809593 | 1.10E-08 | transposed | |
Cla10g00362 | Cla-Chr10:4828806 | Cla10g00433 | Cla-Chr10:5809593 | 5.79E-14 | transposed | |
Cla10g00433 | Cla-Chr10:5809593 | Cla02g00274 | Cla-Chr2:2700132 | 9.51E-77 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61845 | PF03106 | WRKY | 3.30E-25 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00433 | - | - | bhj:120090463 | 1085.09 |