Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00434 ATGATGCCTAGTATGATGACAGAGTCATCAGAGAAGGAGACAGAGGCATTTGTAGAGGTGGATCCGACGGGTCGATATGGGCGGTACGGGGAGCTTCTGGGGACAGGGGCGGTGAAGAAAGTGTACAGAGCATTTGATCAAGAAGAAGGAATAGAGGTAGCTTGGAACCAAGTGAAACTAAGGAGTTTTTCAAATGATCCATCCATGATAGATAGGTTGTATTCAGAGGTGAGATTGTTAAGAACCTTAAAGAACAACAACATAATTGCCTTGTATGATGTTTGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACTGAGGTTTGTACAAGTGGAAACCTTAGAGAGTACAGGAAGAAGCATAGGCAAGTCTCTTTGAAAGCTTTGAAGAAATGGTCCAAACAAATTCTTAAGGGTTTGCATTATTTGCATTCTCATGACCCTTGTGTTATTCATAGAGATCTCAACTGTAGCAACCTCTTTGTCAATGGCAATGTTGGCCAGGTAAAGATTGGTGACTTGGGTTTAGCAGCAACCGTGAGAAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCAGAATTCATGGCACCTGAGCTATATGAAGAGCATTACACCGAGCTTGTGGACATATATTCATTTGGAATGTGTTTGCTTGAATTAGTCACTTTGGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTATAAAAAAGTCTCCTCAGGCATCAAGCCTCAAGCCCTTGACAAGGTCAAGGACCCTGAAGTCAAGGCTTTCATCGAGAATTGCCTTGCCGAATCTCGAGCTCGGCCCTCAGCTGCTGACCTCCTCCGCCACCCCTTCTTTGGAGAAATTGATGATGACGAAAACGACGACGACAATGATTATTAA 900 42.89 MMPSMMTESSEKETEAFVEVDPTGRYGRYGELLGTGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVRLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHSHDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVRKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPQALDKVKDPEVKAFIENCLAESRARPSAADLLRHPFFGEIDDDENDDDNDY 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5845994 5848618 + ClCG10G004620.1 Cla10g00434 282093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00434 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00434 299 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 298 - -
Cla10g00434 299 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00434 299 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Cla10g00434 299 SUPERFAMILY Protein kinase-like (PK-like) 29 290 IPR011009 -
Cla10g00434 299 CDD STKc_WNK 25 285 - -
Cla10g00434 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 298 - -
Cla10g00434 299 PIRSF TyrPK_CSF1-R 26 132 - -
Cla10g00434 299 PIRSF TyrPK_CSF1-R 119 282 - -
Cla10g00434 299 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00905 Cla-Chr6:14489112 Cla10g00434 Cla-Chr10:5845994 5.31E-125 dispersed
Cla10g00434 Cla-Chr10:5845994 Cla06g00582 Cla-Chr6:7111152 3.00E-122 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80842 PF00069 Pkinase 8.50E-52 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00434 K08867 - csv:101221172 555.058