Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00439 ATGGCACAAAAATCAGGTAATTTGGGAAAAACAATTAAATTTCATCAGAAAAAACAAAAAATAAGAAAGAAATTTAAATTTTTTAAAGATATGGCTCTACAGAGTTTTGGTTCGTTAATCAAAGAGCCTCGTTTTGTAGTTAGAAAGTTTCTTGCTAGACCTCAACATGAAGGCCTTGGCGCTGTTGTAAGAAGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCATTCCTTGTTCTCGATGAGTTTTCTGTTACTGCACCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAAACTGTCACTTACATGTTAGAGGGAGCAATGACACATGAAGATTTCAAAGGGCATAAAGGAAGAATTGGAGCTGGTGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTTTCCTCCAAACACAAAATGTATCAAGAAATACACAACGAGGACGTAGTAGAAGTTACAAGAGAAGGAGTAAAAGTGAGAGTGATAGCAGGGGAAGCCTTAGGAGCAAAATCCCCAATCTACACCAAAACTCCAACCATGTACTTGGACTTCACTCTCGGCCCGGGATCTCGCATCGAGCAGCCGATCCCGGTGGGGTGGAATGCGTTCGTGTACGTACTAGAAGGTGAGGGCGGAGTGTTTGGGAGCATGAAATCGATGCCGATTACGCCACATCACCTTCTTTTGTTGGGGAATGGGGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTAAGGTTCATATTGGTTGGGGGTCAGCCATTGAATGAGAGCGTTGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATAGAGGATTTTGAGAATTGTACAAATGGATTTGAGAGAGCAAGGCATTGGAGTTCACAACCTTAA 972 43.42 MAQKSGNLGKTIKFHQKKQKIRKKFKFFKDMALQSFGSLIKEPRFVVRKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLEGAMTHEDFKGHKGRIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMYQEIHNEDVVEVTREGVKVRVIAGEALGAKSPIYTKTPTMYLDFTLGPGSRIEQPIPVGWNAFVYVLEGEGGVFGSMKSMPITPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERARHWSSQP 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5909581 5912318 - ClCG10G004670.2 Cla10g00439 282098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00439 323 Pfam Pirin 63 156 IPR003829 -
Cla10g00439 323 SUPERFAMILY RmlC-like cupins 44 321 IPR011051 -
Cla10g00439 323 PANTHER - 37 322 - -
Cla10g00439 323 CDD cupin_pirin_N 61 158 - -
Cla10g00439 323 Gene3D Jelly Rolls 174 281 IPR014710 -
Cla10g00439 323 PIRSF Pirin 42 320 IPR012093 -
Cla10g00439 323 Gene3D Jelly Rolls 57 307 IPR014710 -
Cla10g00439 323 PANTHER PIRIN-RELATED 37 322 IPR012093 -
Cla10g00439 323 CDD cupin_pirin_C 202 280 - -
Cla10g00439 323 Pfam Pirin C-terminal cupin domain 205 312 IPR008778 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla09g02042 Cla10g00439 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g02042 Cla-Chr9:38008530 Cla10g00439 Cla-Chr10:5909581 7.24E-153 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00439 K06911 - csv:101204082 522.316