Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00503 ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA 462 45.24 MAALSQLQHSLLILLKLSIFAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6673912 6676943 - ClCG10G005380.2 Cla10g00503 282162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00503 153 Gene3D - 32 153 - -
Cla10g00503 153 ProSiteProfiles Translation initiation factor SUI1 family profile. 71 141 IPR001950 GO:0003743|GO:0006413
Cla10g00503 153 PANTHER BNAA10G09260D PROTEIN 42 153 - -
Cla10g00503 153 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 42 153 - -
Cla10g00503 153 CDD eIF1_SUI1 69 152 IPR005874 GO:0003743
Cla10g00503 153 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 46 153 IPR005874 GO:0003743
Cla10g00503 153 SUPERFAMILY eIF1-like 40 153 IPR036877 GO:0003743|GO:0006413
Cla10g00503 153 Pfam Translation initiation factor SUI1 68 141 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01010 Cla-Chr9:10620803 Cla10g00503 Cla-Chr10:6673912 2.30E-74 transposed
Cla10g00503 Cla-Chr10:6673912 Cla02g00178 Cla-Chr2:1817252 2.56E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00503 K03113 - csv:101214921 228.794