Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00503 | ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA | 462 | 45.24 | MAALSQLQHSLLILLKLSIFAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 153 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6673912 | 6676943 | - | ClCG10G005380.2 | Cla10g00503 | 282162 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00503 | 153 | Gene3D | - | 32 | 153 | - | - | |
Cla10g00503 | 153 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 71 | 141 | IPR001950 | GO:0003743|GO:0006413 | |
Cla10g00503 | 153 | PANTHER | BNAA10G09260D PROTEIN | 42 | 153 | - | - | |
Cla10g00503 | 153 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 42 | 153 | - | - | |
Cla10g00503 | 153 | CDD | eIF1_SUI1 | 69 | 152 | IPR005874 | GO:0003743 | |
Cla10g00503 | 153 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 46 | 153 | IPR005874 | GO:0003743 | |
Cla10g00503 | 153 | SUPERFAMILY | eIF1-like | 40 | 153 | IPR036877 | GO:0003743|GO:0006413 | |
Cla10g00503 | 153 | Pfam | Translation initiation factor SUI1 | 68 | 141 | IPR001950 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g01010 | Cla-Chr9:10620803 | Cla10g00503 | Cla-Chr10:6673912 | 2.30E-74 | transposed | |
Cla10g00503 | Cla-Chr10:6673912 | Cla02g00178 | Cla-Chr2:1817252 | 2.56E-57 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00503 | K03113 | - | csv:101214921 | 228.794 |