Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla10g00522 | ATGATCTCTTCTTTCACTCAATCTGCAAAACCCATTAATGGGTCCGACGTGGTTCTCCGGCGGAGTGGTCCGGCGTTAATCCGGCGGTTTTCATGTCCACCTCCATTGCCGGCGCAAAAACCTCAAGGCTCCGTTGTGTGTATGAAAAATGCTCTCCATATCTCCTCGGTTTCCAATTTTGGGCCGCTGGGAACTCGGAAGAGTGATTTGATCACGTGCAAGGCCTACGAGGCTGACCGATCGCAGCCGATTGAGTCGAACATTGAAATAACGGTGGCCGAAACGCCGTCCGAGGCGGCGAAGAAGGTGAAGATCGGACTGTATTTTGCTCTCTGGTGGAGTTTGAACGTCGTGTTCAACATTTACAACAAGAAGGTTTTGAACGCGTATCCATATCCATGGCTAACCTCCACACTTTCTCTTGCTGTTGGTTCTCTCATCATGTTAGTCTCTTGGATGACGAGGATCGCCGAGGCTCCCAAGACCGATTTCGAGTTCTGGAAATCCTTGTTCCCTGTTGCTGTGGCCCATACAATTGGCCATGTAGCGGCAACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACTCATATCATCAAGAGTGGGGAGCCTGCATTCAGCGTATTGGTTTCGAGGTTCCTGTTGGGTGAGACTTTTCCTGTTCCAGTCTACCTCTCTCTTCTCCCGATCATTGGTGGCTGTGCGCTTGCTGCCGTGACCGAGCTCAACTTCAATATGATAGGTTTCATGGGAGCCATGATATCAAACTTGGCATTTGTCTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAGTCTGTTAGTGGAATGAACTACTACGCCTGTTTGTCTATATTGTCCCTTTTGATTCTTACCCCATTCGCAATTGCTGTCGAAGGACCGCAGATGTGGGCTGCAGGATGGAAAACAGCTCTCTCTGAGATTGGACCTAATTTTGTTTGGTGGTTAGCAGCACAGAGTGTCTTCTATCATCTCTACAACCAAGTATCCTACATGTCGCTGGACGAAATTTCTCCCTTGACATTCAGCATTGGCAACACCATGAAACGTATATCGGTCATAGTTTCTGCAATAATCATCTTCCGCACGCCTATACAACCCGTCAACACTCTCGGAGCTGCAATCGCCGTTCTTGGAACCTTCTTATATTCACAGGCAAAACAATGA | 1191 | 47.94 | MISSFTQSAKPINGSDVVLRRSGPALIRRFSCPPPLPAQKPQGSVVCMKNALHISSVSNFGPLGTRKSDLITCKAYEADRSQPIESNIEITVAETPSEAAKKVKIGLYFALWWSLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQMWAAGWKTALSEIGPNFVWWLAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPIQPVNTLGAAIAVLGTFLYSQAKQ | 396 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 6894821 | 6899132 | - | ClCG10G005580.1 | Cla10g00522 | 282181 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla10g00522 | 396 | PANTHER | SOLUTE CARRIER FAMILY 35 | 30 | 396 | - | - | |
| Cla10g00522 | 396 | TIGRFAM | tpt: Tpt phosphate/phosphoenolpyruvate translocator | 104 | 395 | IPR004696 | GO:0016021|GO:0022857|GO:0055085 | |
| Cla10g00522 | 396 | Pfam | Triose-phosphate Transporter family | 104 | 392 | IPR004853 | - | |
| Cla10g00522 | 396 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 145 | 239 | - | - | |
| Cla10g00522 | 396 | PANTHER | GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE | 30 | 396 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cla05g01512 | Cla10g00522 | CCT | |
| Cla05g01512 | Cla10g00522 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla09g01867 | Cla-Chr9:36382530 | Cla10g00522 | Cla-Chr10:6894821 | 1.95E-64 | dispersed | |
| Cla10g00522 | Cla-Chr10:6894821 | Cla11g01534 | Cla-Chr11:28975604 | 1.32E-23 | dispersed | |
| Cla01g02275 | Cla-Chr1:36648025 | Cla10g00522 | Cla-Chr10:6894821 | 5.30E-46 | transposed | |
| Cla05g00261 | Cla-Chr5:2381406 | Cla10g00522 | Cla-Chr10:6894821 | 1.55E-96 | transposed | |
| Cla05g02395 | Cla-Chr5:35508534 | Cla10g00522 | Cla-Chr10:6894821 | 2.82E-70 | transposed | |
| Cla01g02156 | Cla-Chr1:35708258 | Cla10g00522 | Cla-Chr10:6894821 | 1.18E-172 | wgd | |
| Cla10g00522 | Cla-Chr10:6894821 | Cla05g01512 | Cla-Chr5:24598117 | 6.98E-30 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla10g00522 | K15283 | - | csv:101216838 | 735.332 |