Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00522 ATGATCTCTTCTTTCACTCAATCTGCAAAACCCATTAATGGGTCCGACGTGGTTCTCCGGCGGAGTGGTCCGGCGTTAATCCGGCGGTTTTCATGTCCACCTCCATTGCCGGCGCAAAAACCTCAAGGCTCCGTTGTGTGTATGAAAAATGCTCTCCATATCTCCTCGGTTTCCAATTTTGGGCCGCTGGGAACTCGGAAGAGTGATTTGATCACGTGCAAGGCCTACGAGGCTGACCGATCGCAGCCGATTGAGTCGAACATTGAAATAACGGTGGCCGAAACGCCGTCCGAGGCGGCGAAGAAGGTGAAGATCGGACTGTATTTTGCTCTCTGGTGGAGTTTGAACGTCGTGTTCAACATTTACAACAAGAAGGTTTTGAACGCGTATCCATATCCATGGCTAACCTCCACACTTTCTCTTGCTGTTGGTTCTCTCATCATGTTAGTCTCTTGGATGACGAGGATCGCCGAGGCTCCCAAGACCGATTTCGAGTTCTGGAAATCCTTGTTCCCTGTTGCTGTGGCCCATACAATTGGCCATGTAGCGGCAACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACTCATATCATCAAGAGTGGGGAGCCTGCATTCAGCGTATTGGTTTCGAGGTTCCTGTTGGGTGAGACTTTTCCTGTTCCAGTCTACCTCTCTCTTCTCCCGATCATTGGTGGCTGTGCGCTTGCTGCCGTGACCGAGCTCAACTTCAATATGATAGGTTTCATGGGAGCCATGATATCAAACTTGGCATTTGTCTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAGTCTGTTAGTGGAATGAACTACTACGCCTGTTTGTCTATATTGTCCCTTTTGATTCTTACCCCATTCGCAATTGCTGTCGAAGGACCGCAGATGTGGGCTGCAGGATGGAAAACAGCTCTCTCTGAGATTGGACCTAATTTTGTTTGGTGGTTAGCAGCACAGAGTGTCTTCTATCATCTCTACAACCAAGTATCCTACATGTCGCTGGACGAAATTTCTCCCTTGACATTCAGCATTGGCAACACCATGAAACGTATATCGGTCATAGTTTCTGCAATAATCATCTTCCGCACGCCTATACAACCCGTCAACACTCTCGGAGCTGCAATCGCCGTTCTTGGAACCTTCTTATATTCACAGGCAAAACAATGA 1191 47.94 MISSFTQSAKPINGSDVVLRRSGPALIRRFSCPPPLPAQKPQGSVVCMKNALHISSVSNFGPLGTRKSDLITCKAYEADRSQPIESNIEITVAETPSEAAKKVKIGLYFALWWSLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQMWAAGWKTALSEIGPNFVWWLAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPIQPVNTLGAAIAVLGTFLYSQAKQ 396
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 6894821 6899132 - ClCG10G005580.1 Cla10g00522 282181
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00522 396 PANTHER SOLUTE CARRIER FAMILY 35 30 396 - -
Cla10g00522 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cla10g00522 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Cla10g00522 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Cla10g00522 396 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 30 396 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cla05g01512 Cla10g00522 CCT
Cla05g01512 Cla10g00522 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01867 Cla-Chr9:36382530 Cla10g00522 Cla-Chr10:6894821 1.95E-64 dispersed
Cla10g00522 Cla-Chr10:6894821 Cla11g01534 Cla-Chr11:28975604 1.32E-23 dispersed
Cla01g02275 Cla-Chr1:36648025 Cla10g00522 Cla-Chr10:6894821 5.30E-46 transposed
Cla05g00261 Cla-Chr5:2381406 Cla10g00522 Cla-Chr10:6894821 1.55E-96 transposed
Cla05g02395 Cla-Chr5:35508534 Cla10g00522 Cla-Chr10:6894821 2.82E-70 transposed
Cla01g02156 Cla-Chr1:35708258 Cla10g00522 Cla-Chr10:6894821 1.18E-172 wgd
Cla10g00522 Cla-Chr10:6894821 Cla05g01512 Cla-Chr5:24598117 6.98E-30 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00522 K15283 - csv:101216838 735.332