Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00527 ATGCAATTTCCAACGCGAGTTTTGATCTCTGTTTTTTTCCTTATTTCCCTTCTTGTTTTTTCCAATTTTTCTTTCTGTTCTGCACAAGACTATATCATTGGCGGCGGCGGCGGTGGCGGCGGCGACGACGACGACCAGGCGAAGCCAGCGGCGCCACCGCCGGAGCAGAATGACTGTAATGGGATATTCTTGTCCTATACATTTATTTCGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCTCAGTCATGGGCATTCAAGTCGGAGGCGTTGATTCTGAATGCGGGATCGACGGAGCTGAAGGCATGGAAGATGTTCATCGGATTTCACCACCGGGAAATCCTGGTGTCGGCGGCTGGCGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGACGTTGGGAATGGAACCACTTTGGCTGGGTACCCCATGACGGATCTGAAAACGTCGATTGAAACCGCGGGAGATATTAATCAGATTCAGGCGACGGTGGAGCTGACAGGAACGCAGTTCGGAATCAAGCCGCCTGGTGTTCCGATGCCAAAGACGATTCGCCTTGTTAACGATGGATTTAAGTGCCCTGCGCCTCGCCGTCGCGGTAAGAGAACAATGCATGTATGCTGCAAAAAGGATCCAAAGTTCAAGGTGAAAGCACCAAAGAAAACCAGATTTTTCCCTCGCCAAAATGGAGATCTCTCACTCACTTATGATATTATGCAAGCTTATGGAAATAACTATCTTGCTCAAGTCACAATCGACAACAACAATCCTCTAGGACGTCTTGATCACTGGAACTTAACTTGGGAATGGATGAGAGGAGAGTTCATTCAAAGCATGAGAGGAGCTTATACTCATACAAGAGATTTATCTCAATGCGTTTATGGTCCTGCAGGCCAATACTATCAAGATTTTGACTTCTCTCAAGCCATGAGTTGCGATAAAAGGCCGGTCATTGCCGATCTTCCAGCCGATCGAAAAGACGACGATAAGGTTGGGAAGTTGCCGTATTGCTGTAGGAATGGAAGTTTGTTGCCAACATTGATGGATGAGAGCAAAGCAAGGTCTATTTTTCAATTACAAGTCTATAAGCTTCCACCTGATATGAACCGAACGGCTCTTAATCCACCGCAGAAATGGAAGATCTCGGGCATTCTAAACCCGAAATACGTTTGTGCAGCTCCACTCCGAGTTGAACCAACGGAGTTTCCTGACCCTAGTGGACTTCAGGCAACGAGTACCGCGATTGCAAGTTGGCAAATTGTTTGCAACATTACAAGGCCAAAGGTGAAGCAATCAAAATGCTGTGTTTCATTTTCAGCATATTATAATGACTCTGTAATTCCTTGCAATACTTGTGCCTGTGGTTGTGACAACACTGATACTGATACTTGCAATCCAAATGCACATGCAATGCTGCTCCCTCCAGAAGCACTTTTGGTTCCATTTGTTAACAGGACAGCAAAAGCAAGAGCTTGGGCTAAAATTAAGCATTACCCAAATCCAAAGAAGATGCCTTGTCCTGATAACTGTGGAGTTAGCCTCAATTGGCATATTAACTCTGATTATACCAATGGATGGACTGCAAGATTAACACTTTTCAATTGGGAAGATTATCCATTTGAGGATTGGTTTACTGCTATTCAGTTGAACAAGGTCGGTCGCGGTTACGAAAACGTTTATTCCTTCAACGGAACCCGGCTTCCCAACATAAAAAACACCATCTTCCTCCAAGGTTTGCCTGGTTTAACATACTTGATGGGAGAGGTAAATGGGACCAATCCTAGATCTGATCCAAGAGTTCCAGGGAAGCAACAATCTGTCATTTCTTTCACCAAGAAAGGCCTGCGCGACATCGACATACTAGGAGGCGACGGTTTTCCAATCAAAGTGTTTTTCAATGGCGAAGAATGTGCGCTTCCAAAGGAAATTCCCACAGCAAGTTCAGTCCACCACTCTCGCCACGGTTTCATGCTACTCATCTTCATCTTAGCTCTTACTTTCGCGTTTATAACCGATCGCTTCCATTGA 2034 46.07 MQFPTRVLISVFFLISLLVFSNFSFCSAQDYIIGGGGGGGGDDDDQAKPAAPPPEQNDCNGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLVNDGFKCPAPRRRGKRTMHVCCKKDPKFKVKAPKKTRFFPRQNGDLSLTYDIMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLSQCVYGPAGQYYQDFDFSQAMSCDKRPVIADLPADRKDDDKVGKLPYCCRNGSLLPTLMDESKARSIFQLQVYKLPPDMNRTALNPPQKWKISGILNPKYVCAAPLRVEPTEFPDPSGLQATSTAIASWQIVCNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCDNTDTDTCNPNAHAMLLPPEALLVPFVNRTAKARAWAKIKHYPNPKKMPCPDNCGVSLNWHINSDYTNGWTARLTLFNWEDYPFEDWFTAIQLNKVGRGYENVYSFNGTRLPNIKNTIFLQGLPGLTYLMGEVNGTNPRSDPRVPGKQQSVISFTKKGLRDIDILGGDGFPIKVFFNGEECALPKEIPTASSVHHSRHGFMLLIFILALTFAFITDRFH 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6977870 6981523 - ClCG10G005640.1 Cla10g00527 282186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00527 677 Pfam COBRA-like protein 248 427 IPR006918 GO:0010215|GO:0031225
Cla10g00527 677 PANTHER COBRA-LIKE PROTEIN 10 4 676 - -
Cla10g00527 677 PANTHER COBRA-LIKE PROTEIN 7 4 676 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla05g01523 Cla10g00527 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01518 Cla-Chr7:32368428 Cla10g00527 Cla-Chr10:6977870 6.01E-29 dispersed
Cla07g01519 Cla-Chr7:32372088 Cla10g00527 Cla-Chr10:6977870 7.58E-29 dispersed
Cla10g00527 Cla-Chr10:6977870 Cla02g00449 Cla-Chr2:4396275 6.27E-38 dispersed
Cla05g00680 Cla-Chr5:6326478 Cla10g00527 Cla-Chr10:6977870 0 transposed
Cla10g00527 Cla-Chr10:6977870 Cla05g01523 Cla-Chr5:25005293 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00527 - - csv:101216608 1246.49