Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00607 ATGGCCGCCACAGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA 801 55.56 MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9031527 9033477 + ClCG10G006490.1 Cla10g00607 282266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00607 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 266 IPR001344 GO:0009765|GO:0016020
Cla10g00607 266 Gene3D Chlorophyll a/b binding protein domain 55 259 - -
Cla10g00607 266 Pfam Chlorophyll A-B binding protein 65 232 IPR022796 -
Cla10g00607 266 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 6 266 - -
Cla10g00607 266 SUPERFAMILY Chlorophyll a-b binding protein 47 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00607 Cla-Chr10:9031527 Cla10g01121 Cla-Chr10:25634840 5.09E-119 dispersed
Cla10g00607 Cla-Chr10:9031527 Cla01g02379 Cla-Chr1:37491657 1.11E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00607 K08914 - csv:101207278 521.161