Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00664 ATGTCTACTAAAATATTTACCCAATACTCTTTGTACTTCTTCTTCTACTTTTTTTTAAAAGAAAAGAAATTGCAAATCCTTCAGTTCAAATATCTCATTCAAAGCAATAAAGAGCATCCTTTAATTAAAGCTAAAGGTTTGGTCAGTGATTTCCATGTTTTGCTTGCTCTCAAACAAGGGTTTCAATTCTCCGACTCTGCTGCACTAAGCACTTGGACTGCCTCAAACTTCAGCTCAGTTTGTTCATGGGTTGGGATTCAGTGCTCTGACGGACGAGTTGTGTCAGTCAACTTGACAGATTTGAGTCTTGGTGGCTATGTTTCACCGTTGATTTCAAGTCTTGACCAACTTACTGAGCTGTCTGTCGCAGGAAATAACTTCTCTGGTGGCATTGAAGTAGTGAATTTGAGTTATCTTCGATTCCTTAACATCTCAAACAACCAGTTCACTGGGACTCTGCACTGGAACTTTTCGAGCCTGCCGAACTTGGAGGTGTTGGATGCCTATAACAACAACTTCAGCGCTGTTCTCCCCACTGAGATTGTGAATTTACAGAACCTCAAATACTTGGACCTTGGAGGTAACTTTTTCCATGGAAAAATCCCTGAAAGCTATGGCAGTTTAGAAGGGTTGCAATATTTTTCTATTGGAGGAAATGATTTGGTTGGGAAAATCCCAGGAACGTTGGGAAATCTCACAAATTTGAGAGAAATTCACTTGGGCTATTACAATGTTTTCGAAGGGGGGATTCCACCTGAGCTAGGGAAGTTGACCAATTTGGTTATCATGGAGATTGCAGACTGCAGTTTGGATGGGGAAATTCCTCATGAACTTGGAAATTTGAAGGCCTTGAACACTCTGTATTTGCATACAAATTTACTCTCAGGTTCGATTCCGAAGCAGTTAGGCAATCTGACAAACTTGGTCAATCTGGATCTCTCCAACAATGCACTCACAGGAGAAATCCCATCTGAGTTTGTTGAGCTCAAACAGCTCAACCTGTACAACCTCTTCATGAACAAGCTGCACGGATCTATTCCAGACTACATAGCAGATTTGCCGAACTTGGAGACCTTGGACCTGTGGATGAACAACTTCACCGGCACAATCCCGAAGAATCTTGGCCAAAATGGGAGGCTTCAGCTCCTTGACTTGTCGACAAACAAGCTCACGGGTACAATACCTGAGGGTTTGTGTTCATCAAACCAGCTGAAAATACTGATTCTGATGAACAACTTCCTGTTTGGGCCAATCCCTGAAGGTCTGGGGACATGTACCAGTCTTACAAAAGTGAGGTTGGGGCAGAACTATCTGAATGGAAGCATTCCCAATGGCTTCATTTACTTGCCTCAGCTAAATTTAGCAGAGTTTCAGGACAATTACCTTTCAGGTACACTTTCAGAAAATAGGGAGAGTTCATCAATACCCATCAAATTAGGGCAACTTAATCTCTCTAACAATCTTCTCTCAGGAACTTTACCATCTTCACTTTCTAATTTGTCTTCTCTGCAAATTCTCCTCCTCAATGGCAACCAGTTTTCTGGTACAATCCCTCCTTCCATTGGAGAACTCAATCAACTTCTAAAGCTTGATCTCAGCAGAAACTCACTTTCGGGTGAAATTCCACCTGAAATTGGTTATTGTATCCATCTCACTTACCTTGATTTGAGCAGGAACAACCTTTCTGGCCCAATTCCCCCTGAAATTTCCAATGCACATATTCTCAATTACCTCAACTTGTCGAGAAATCACCTAAATCAATCCCTACCGAAATCAATAGGGACAATGAAGAGCCTGACGATTGCTGATTTCTCCTTCAACGATTTCTCGGGGAAGCTACCGGAATCAGGACAGCTTGCCTTCTTCAATGCTTCATCCTTCGCCGGAAATCCCCAACTTTGCGGCTCTCTCCTCAACAATCCCTGCAACTTCGCAACAACAACAACAAAACCGGGAAAAACGCCGACGTATTTCAAGCTAATCTTCGCCCTCGGCCTATTGATTTGCTCTCTAGTGTTCGCCATAGCGGCAGTAGTCAAAGCGAAATCATTCAAAAGAAACGGATCAAGTTCATGGAAAATGACCTCATTCCAAAAGCTTGAATTCACCGTCTACGACGTCTTGGAGTGCGTGAAAGACGGCAACGTTATCGGAAGAGGCGGCGCCGGCATCGTCTACCACGGGAAAATGCCGAACGGAGTTGAAATCGCAGTGAAGAAACTCCTAGGGTTCGGCCCTAACAGCCACGACCATGGATTCCGAGCCGAAATCCAAACCCTAGGCAATATTCGACACCGAAACATCGTCAGATTACTCGCATTCTGCTCCAATAAAGAGACAAACCTCCTCGTATATGAATACATGAGGAATGGAAGTTTAGGCGAAGCACTCCACGGCAAAAAAGCCTCGTTCCTCGGATGGAATTTGAGATACAAAATCGCCATTGAAGCCGCCAAAGGTCTCTGCTACCTCCACCACGATTGCTCTCCACTAATCGTCCATCGAGACGTGAAATCGAACAACATTCTCTTGAATTCGAACTTCGAAGCTCATGTCGCCGATTTCGGATTAGCGAAGTTCATGTTCGACGGCGGCGCGTCGGAATGTATGTCGGTGATCGCCGGATCTTACGGCTACATCGCTCCTGAATATGCATACACATTGAGAGTTGACGAGAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTATTAGAGCTTTTAACGGGGCGACGACCCGTTGGAGATTTTGGAGACGGAGTGGTTGATATAGCACAATGGTGCAAAAAAGCTCTAAGAGATGGTGAGAATGAAAATGACATTCTTTGCATAGTTGACAAAAGAGTAGGAATGGTGCCCAAAGAGGAAGCAAAACATTTATTCTTCATAGCAATGTTATGTGTGCAAGAGAATAGCGTGGAAAGACCAACAATGAGAGAAGTTGTTCAAATGTTGGCTGAATTTCCTCACCAGTCTCCCAACTGTTACCAATCTTCCTCTTCTTCTTCTCCCGGTCAAAAATTGAAGAATGGTGAAAAGGAAAGAAAATATCAGTCAAAGTCCAAATCAGATCTTTTAGTATAA 3081 43.4 MSTKIFTQYSLYFFFYFFLKEKKLQILQFKYLIQSNKEHPLIKAKGLVSDFHVLLALKQGFQFSDSAALSTWTASNFSSVCSWVGIQCSDGRVVSVNLTDLSLGGYVSPLISSLDQLTELSVAGNNFSGGIEVVNLSYLRFLNISNNQFTGTLHWNFSSLPNLEVLDAYNNNFSAVLPTEIVNLQNLKYLDLGGNFFHGKIPESYGSLEGLQYFSIGGNDLVGKIPGTLGNLTNLREIHLGYYNVFEGGIPPELGKLTNLVIMEIADCSLDGEIPHELGNLKALNTLYLHTNLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPSEFVELKQLNLYNLFMNKLHGSIPDYIADLPNLETLDLWMNNFTGTIPKNLGQNGRLQLLDLSTNKLTGTIPEGLCSSNQLKILILMNNFLFGPIPEGLGTCTSLTKVRLGQNYLNGSIPNGFIYLPQLNLAEFQDNYLSGTLSENRESSSIPIKLGQLNLSNNLLSGTLPSSLSNLSSLQILLLNGNQFSGTIPPSIGELNQLLKLDLSRNSLSGEIPPEIGYCIHLTYLDLSRNNLSGPIPPEISNAHILNYLNLSRNHLNQSLPKSIGTMKSLTIADFSFNDFSGKLPESGQLAFFNASSFAGNPQLCGSLLNNPCNFATTTTKPGKTPTYFKLIFALGLLICSLVFAIAAVVKAKSFKRNGSSSWKMTSFQKLEFTVYDVLECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGPNSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKASFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFMFDGGASECMSVIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVVDIAQWCKKALRDGENENDILCIVDKRVGMVPKEEAKHLFFIAMLCVQENSVERPTMREVVQMLAEFPHQSPNCYQSSSSSSPGQKLKNGEKERKYQSKSKSDLLV 1026
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10116055 10122578 - ClCG10G007070.2 Cla10g00664 282323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00664 1026 SUPERFAMILY Protein kinase-like (PK-like) 695 984 IPR011009 -
Cla10g00664 1026 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 34 993 - -
Cla10g00664 1026 Gene3D Transferase(Phosphotransferase) domain 1 788 1005 - -
Cla10g00664 1026 MobiDBLite consensus disorder prediction 991 1006 - -
Cla10g00664 1026 Pfam Leucine Rich Repeat 550 571 IPR001611 GO:0005515
Cla10g00664 1026 Gene3D Phosphorylase Kinase; domain 1 675 787 - -
Cla10g00664 1026 SMART LRR_typ_2 160 184 IPR003591 -
Cla10g00664 1026 SMART LRR_typ_2 305 329 IPR003591 -
Cla10g00664 1026 SMART LRR_typ_2 524 548 IPR003591 -
Cla10g00664 1026 SMART LRR_typ_2 378 401 IPR003591 -
Cla10g00664 1026 SMART LRR_typ_2 500 522 IPR003591 -
Cla10g00664 1026 SMART LRR_typ_2 353 377 IPR003591 -
Cla10g00664 1026 SMART LRR_typ_2 549 572 IPR003591 -
Cla10g00664 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Cla10g00664 1026 Gene3D Ribonuclease Inhibitor 349 650 IPR032675 -
Cla10g00664 1026 MobiDBLite consensus disorder prediction 991 1026 - -
Cla10g00664 1026 Pfam Leucine rich repeat 139 195 IPR001611 GO:0005515
Cla10g00664 1026 Gene3D Ribonuclease Inhibitor 49 154 IPR032675 -
Cla10g00664 1026 SUPERFAMILY L domain-like 377 635 - -
Cla10g00664 1026 SMART serkin_6 711 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00664 1026 Gene3D Ribonuclease Inhibitor 247 348 IPR032675 -
Cla10g00664 1026 Gene3D Ribonuclease Inhibitor 155 246 IPR032675 -
Cla10g00664 1026 MobiDBLite consensus disorder prediction 1007 1026 - -
Cla10g00664 1026 PRINTS Leucine-rich repeat signature 380 393 - -
Cla10g00664 1026 PRINTS Leucine-rich repeat signature 524 537 - -
Cla10g00664 1026 Pfam Protein tyrosine and serine/threonine kinase 714 984 IPR001245 GO:0004672|GO:0006468
Cla10g00664 1026 ProSiteProfiles Protein kinase domain profile. 711 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00664 1026 PANTHER UNNAMED PRODUCT 34 993 - -
Cla10g00664 1026 Pfam Leucine rich repeat N-terminal domain 49 89 IPR013210 -
Cla10g00664 1026 SUPERFAMILY RNI-like 96 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02534 Cla-Chr1:38979112 Cla10g00664 Cla-Chr10:10116055 0 dispersed
Cla10g00664 Cla-Chr10:10116055 Cla10g00776 Cla-Chr10:14753611 0 dispersed
Cla10g00664 Cla-Chr10:10116055 Cla01g01761 Cla-Chr1:32517304 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80847 PF07714 PK_Tyr_Ser-Thr 1.70E-43 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00664 - - csv:101215633 1806.57