Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00694 ATGTCCACAACAAAGCTTCTTGCCCATACCTTTGACCCAATCGATGAGAATCACGACAACGACCGCGAAATTGAAGCCTCTGAGAGGCTCGTCGGATCGCCATTTACTGAGGATAGAGATTCTGTTTCCCTCACCCTAGGCGAGCCCCTCTTGCGTACCAGTGTCGCCAGGGTCAGTACCACCTCCCAGCTCGCCATTGTTGGTTCTAATATCTGTCCTATTGAGAGCCTCGACTACGAATATGATAAATTTTCATTTAACTCGTCTTGCTTCTCGGGTATCAGGCGGTTACTTGTAGTTAATTGGTTGGTCAGGCTAATCAACAGAAATTCTTTTCTTTCGGATTTAGATTTGCCATTGTTGGATGTCTTGGCCATTTCTTTTATAACTACCTCTGGATGCCGCTTGATTGATTCTGCACGTGATCCTCACATTCTTGTAAATTGTAACAGGATTATCGAGAATGAACTTTTCAAGCAGGATTGGAGGTCCAGAAAAAAGCTCGAGATATTTCAGTATATCATCCTCAAATGGACATTGTGCCTTTTCATCGGTTTAATTACAGGGCTTGTTGGCTTCTTCAACAACATAGCTGTTGAGAATATTGCCGGTCACAAACTTCTCCTGACAAATAATCTCATGCTCAAGGAAAAGTACTTTCAGGCATTTGCAGTATACGTTGCTTCCAATAGTGCTTTAGCTGCTGCTGCTGCAATCCTCTGTGCCTATATTGCCCCTGCTGCTGCAGGTTCTGGCATACCTGAGGTGAAAGCATACCTCAACGGTATAGATGCTTATTCTATATTGGCTCCGAGTACCTTATTTGTGAAGTGCGTAGTCCCACCTGATTTGACCCCATCCTGGATGGAAAGATGTGCAAGCACAGTTGTACTCCAAAGTCTGGTGATCAACGACAAGGGTAGGAAGGAAAATAACAAGGACGATATTTTTGGTTCAATATTTGCTGTTGCCGGTGGATTTGTTGTGGGTAAGGAAGGACCCATGGTTCATACTGGTGCATGCATTGCCTCGTTACTGGGACAAGGAGGCTCTCGCAAATACCGCTTGACTTGGAAGTGGCTCAGATACTTTAAAAATGATAGGGACAGGCGGGATTTGATAACTTGTGGTGCAGCTGCTGGTGTTGCAGCTGCCTTTCGGGCTCCAGTTGGTGGCGTTCTCTTTGCACTTGAAGAAGCAGCTTCATGTTATGATTGTGGACATGTTAAGCTAGGTTTTGTCTTGTTGGCTTTCTTTGGTATCTTGATTTTACTGAATGTGTGGAACTGCTTTCACGTCCACACGAATGCACTTCCTTTTAATTATATAAGCAATGAGGTGCATTTAGAACGTTTAAAGGTCCAAGATCATTCTGTATCATATTTACCAGGAACAGCTTTTTCTCCATCATCATTGATAGTAATCCATGTTGTCGAGATTGTTAGGTGGAGGAGCGCTCTTCTCTGGAGGACCTTTTTCACGACTGCTGTAGTAGCCGTTGTCTTAAGGAGTTTCATTGAATTTTGCCGAGGGGGAGAATGTGGGTTATTTGGTGAAGGAGGTCTCATCATGTTCAACATCAATACAGAAAACTCCACTTATGGGACCCCAGATCTTATTGCAATTGTTTTACTAGGAGTTTTTGGCGGTGTACTTGGAAGCCTTTACAACTACCTCGTGGATAAGGTTCTCCGAACCTACAGCATCATAAATGAGAGAGGTCCCGGCACGAAACTTATCCTTGTTGTTGGTGTTTCCATATTGACAACCTGTGTCTCATTTGGTCTTCCTTGGTTCTCGCAATGTTTACCGTGCCCAACTGACTTGGAGGATCAATGCCCAACCGTTGGTCGCTCAGGAAACTACAAGAACTTCCAATGCCCACCTGGCCACTATAATGATCTTGCTTCCTTATTTTTCAATACCAATGATGATGCCATCCGAAACCTGTTCACATCTGCTACTGACAAGCATTTTCAGCTCTCCTCACTTTTTGTCTTCTTTGTTTCTATCTATTGTCTTGGCATTATTACTTATGGCATTGCTGTGCCTTCTGGGCTCTTCATTCCTGTAATTCTGGCAGGGGCCTCTTACGGTCGCATTGTAGGAAGATTATTTGGTTCAGTTGCTACTCTTGATGTCAGTCTCTATGCCCTTCTCGGAGCTGCATCCTTCCTTGGTGGAACTATGAGAATGACTGTTTCTCTATGTGTCATACTCCTTGAACTTACTAATAACCTTTTGATGCTCCCATTACTGATGTTGGTTCTTCTAATTTCAAAGTCAGTGGCAGATATTTTTAATAAAGGTGTCTATGATCAGATTGTGAAGATGAAAGGACTGCCTTTTATGGAAGCCCACGCAGAACCATTTATGAGGCAATTGGTCGCTGGTGGTGTGGCTTCTGGTCCCTTAATTACCTTTTCTGGGATCGAAAAGGTTGATAACATTGTCCACGCTTTGAAAATGACAAACCACAATGGGTTTCCTGTAATTGATGAACCACCTTTCTCAGATAGTTCAGAGCTTTGTGGGCTTGTTCTGAGGTCTCATCTGCTTGTTTTGCTTAAAGAAAAAAAATTTACTAAGCAAAAGGTGTCACTTAGATCAGAAATCTGGAGGGGATTCAAAGCACATGATTTTGCAAAAGCAGGTTCTGGTAAAGGGGTGAAACTGGAAGATTTGGACTTCAACGAGGAGGAGATGGAAATGTTTGTTGATCTTCATCCCATTACGAACACGTCGCCCTACACAGTGGTAGAATCAATGTCTCTAGCTAAAGCGGCAATTCTCTTTCATGCACTTGGCTTGAGGCACTTGTTGGTGGTTCCGAAGACACCTGGGAGGCCTCCTATTGCTGGAATTCTTACCCGGCACGACTTCATGCCGGAGCATGTTCTGGGACTTTACCCGCATCTCAACCCCCACAAATAG 2934 43.8 MSTTKLLAHTFDPIDENHDNDREIEASERLVGSPFTEDRDSVSLTLGEPLLRTSVARVSTTSQLAIVGSNICPIESLDYEYDKFSFNSSCFSGIRRLLVVNWLVRLINRNSFLSDLDLPLLDVLAISFITTSGCRLIDSARDPHILVNCNRIIENELFKQDWRSRKKLEIFQYIILKWTLCLFIGLITGLVGFFNNIAVENIAGHKLLLTNNLMLKEKYFQAFAVYVASNSALAAAAAILCAYIAPAAAGSGIPEVKAYLNGIDAYSILAPSTLFVKCVVPPDLTPSWMERCASTVVLQSLVINDKGRKENNKDDIFGSIFAVAGGFVVGKEGPMVHTGACIASLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASCYDCGHVKLGFVLLAFFGILILLNVWNCFHVHTNALPFNYISNEVHLERLKVQDHSVSYLPGTAFSPSSLIVIHVVEIVRWRSALLWRTFFTTAVVAVVLRSFIEFCRGGECGLFGEGGLIMFNINTENSTYGTPDLIAIVLLGVFGGVLGSLYNYLVDKVLRTYSIINERGPGTKLILVVGVSILTTCVSFGLPWFSQCLPCPTDLEDQCPTVGRSGNYKNFQCPPGHYNDLASLFFNTNDDAIRNLFTSATDKHFQLSSLFVFFVSIYCLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDVSLYALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLLMLVLLISKSVADIFNKGVYDQIVKMKGLPFMEAHAEPFMRQLVAGGVASGPLITFSGIEKVDNIVHALKMTNHNGFPVIDEPPFSDSSELCGLVLRSHLLVLLKEKKFTKQKVSLRSEIWRGFKAHDFAKAGSGKGVKLEDLDFNEEEMEMFVDLHPITNTSPYTVVESMSLAKAAILFHALGLRHLLVVPKTPGRPPIAGILTRHDFMPEHVLGLYPHLNPHK 977
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10693947 10701516 + ClCG10G007370.1 Cla10g00694 282353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00694 977 Gene3D Clc chloride channel 169 281 - -
Cla10g00694 977 Pfam Voltage gated chloride channel 234 407 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cla10g00694 977 Pfam Voltage gated chloride channel 478 765 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cla10g00694 977 Gene3D - 810 948 IPR046342 -
Cla10g00694 977 Gene3D Clc chloride channel 314 785 - -
Cla10g00694 977 SUPERFAMILY Clc chloride channel 155 279 IPR014743 -
Cla10g00694 977 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 151 411 - -
Cla10g00694 977 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 481 977 - -
Cla10g00694 977 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 151 411 - -
Cla10g00694 977 SUPERFAMILY Clc chloride channel 481 786 IPR014743 -
Cla10g00694 977 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 481 977 - -
Cla10g00694 977 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 40 81 - -
Cla10g00694 977 CDD CBS_pair_voltage-gated_CLC_euk_bac 787 964 - -
Cla10g00694 977 ProSiteProfiles CBS domain profile. 911 974 IPR000644 -
Cla10g00694 977 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 40 81 - -
Cla10g00694 977 SUPERFAMILY Clc chloride channel 316 439 IPR014743 -
Cla10g00694 977 SUPERFAMILY CBS-domain pair 788 962 IPR046342 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00567 Cla-Chr6:6873535 Cla10g00694 Cla-Chr10:10693947 1.16E-175 dispersed
Cla10g00694 Cla-Chr10:10693947 Cla11g00675 Cla-Chr11:7891142 1.22E-06 dispersed
Cla10g00694 Cla-Chr10:10693947 Cla11g00303 Cla-Chr11:3533373 1.77E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00694 K05016 - csv:101209987 878.626