Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00714 | ATGTTGGTTCTTAGATCCGTTTTCGAAAGGACTTTGGAGAAGGTCGAGATTGGAGGAGCTAGTGGTTGGGAATCTGAAATTGGGTGTTTTGGTTGGTTTTGGCTTTGGTCATTTTTAAGCGTATCCTCAGTGATGGTTGATTATGTTCGAGATGACTGCTATGTCATGGTGATTGTTATCCTATTTTGGTTGATTATGTTCGTGATGACTGCTATGTTACGGTGTCCCTCGGGATCACCACTTATGTTTATGTTTATGACTGTGACCTTCGGGATCCTTACGTGCCTTCGGATAATGGAGGGAATGCCGCACCCAATACCCCGTACAGTGGAGGAGGTCTACGGCGACTTCAAAGGCAGGCGTGCCGGCTTGATCAAAGCCCTCACCACTGATGTCGAGAAGTTCTACCAGCAGTGCGATCCTGAGAAGGAGAACTTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCGGTGGAGGAGGTGCCTCCTGAGCTCCCGGAACCAGCATTAGGTATAAACTTTGCAAGGGATGGGATGCAGGAGAAAGACTGGTTATCACTGGTTGCAGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGGTTTGGGAAGACTGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGACTGGAAATGGTAAGCAGTCGAAAGAGCAGTCTGCCACACATAACAATGGCAGTAAAAGCAAGTCGAGTGGAAAGATGTCCCGGCAATTGGAGTCCCATAGCAAGGGAGTGAAGATGTCTCCACCACCGAAAGAGGATGAAGATAGCGGGGAAGATGAGGAGGAAGAAGAAGACGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAATGACGAATTCTGGATTTGTTGCGATGTGTGTGAAAGATGGTTCCATGGAAAATGTGTGAAGATTACACCTGCAAAGGCGGAGCATATCAAGCAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGA | 1062 | 47.08 | MLVLRSVFERTLEKVEIGGASGWESEIGCFGWFWLWSFLSVSSVMVDYVRDDCYVMVIVILFWLIMFVMTAMLRCPSGSPLMFMFMTVTFGILTCLRIMEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 11292447 | 11302431 | - | ClCG10G007570.2 | Cla10g00714 | 282373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00714 | 353 | PANTHER | CPG BINDING PROTEIN | 99 | 350 | IPR045104 | GO:0006355|GO:0042393 | |
Cla10g00714 | 353 | Pfam | PHD-finger | 300 | 349 | IPR019787 | - | |
Cla10g00714 | 353 | Pfam | Alfin | 109 | 237 | IPR021998 | GO:0006355|GO:0042393 | |
Cla10g00714 | 353 | CDD | PHD_AL_plant | 300 | 349 | IPR044104 | - | |
Cla10g00714 | 353 | MobiDBLite | consensus disorder prediction | 239 | 260 | - | - | |
Cla10g00714 | 353 | MobiDBLite | consensus disorder prediction | 281 | 298 | - | - | |
Cla10g00714 | 353 | ProSitePatterns | Zinc finger PHD-type signature. | 300 | 346 | IPR019786 | - | |
Cla10g00714 | 353 | ProSiteProfiles | Zinc finger PHD-type profile. | 297 | 349 | IPR019787 | - | |
Cla10g00714 | 353 | SUPERFAMILY | FYVE/PHD zinc finger | 288 | 350 | IPR011011 | - | |
Cla10g00714 | 353 | MobiDBLite | consensus disorder prediction | 239 | 299 | - | - | |
Cla10g00714 | 353 | SMART | PHD_3 | 299 | 347 | IPR001965 | - | |
Cla10g00714 | 353 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 7 | 99 | 350 | - | - | |
Cla10g00714 | 353 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 289 | 348 | IPR013083 | - | |
Cla10g00714 | 353 | MobiDBLite | consensus disorder prediction | 261 | 280 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g00996 | Cla-Chr8:22725908 | Cla10g00714 | Cla-Chr10:11292447 | 7.08E-91 | dispersed | |
Cla09g00078 | Cla-Chr9:768976 | Cla10g00714 | Cla-Chr10:11292447 | 1.03E-86 | dispersed | |
Cla10g00714 | Cla-Chr10:11292447 | Cla10g02093 | Cla-Chr10:36624060 | 2.38E-94 | dispersed | |
Cla10g00714 | Cla-Chr10:11292447 | Cla07g00398 | Cla-Chr7:4960689 | 4.40E-108 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61857 | PF12165 | Alfin | 5.20E-68 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00714 | - | - | csv:101212601 | 488.419 |