Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00724 ATGGCGACCAACAAGGAGAAAGAACCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTACGCTTTTGGAGTCTGGCTACACAACAATACATACCTCCATCTTCCCCGGCTCCGATTCTTCCCATTTGTTCAATCTCCAGGCCTCCACTAACCCTAATGCTAACCTTAGGGTTTTCGAAGCGAATGTGATGGACGGCGAGGCGGTGGCCAGGGCTGTCGAAGGCTGCAAGGGCGTATTCCACATTGCCTCACCCTGCACATTGGAGGATCCGATTGATCCGCAGAAAGAATTGGTGGAGCCGGCGGTGCAAGGCACTATCAATGTTCTTAATGCGGCGAAGAAGTTCGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCTGCTCTTGTCCCTAACCCCGGTTGGCCGTCTGGTATGCCTTTCGATGAATCCTCATGGACAGACATAGAGTACTGCAAATCGCGCAAGGCAAGAGCAGAAGCTCTCAATAAGCAATTATTGTTGACAGCTGATTTTTTTTATAGTAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCAGCATGGGAGTTTGTAGAGAATCATGGACTGGATGTTGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTCCAACCTAATTTGAACGCAAGTTGTGCTGTATTGCTGCAGTTGCTCCAGGGATCCCAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAATTTTATTGTTTGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGATTTTGCGGACAAAGTCTCAAAAATATGCCCTCAATTTCCAGTTCACAGATTTGTGGGAGAAACACAACCCGGGTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGTTTTCACCCCTCTTGAAGTTGCCATTCAAGATACCCTTGAAAGTCTTAGAAGCAAAGGCTTTTTGGATCAGTGA 1041 46.69 MATNKEKEPVCVTGANGFIGSWVVRTLLESGYTTIHTSIFPGSDSSHLFNLQASTNPNANLRVFEANVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVQGTINVLNAAKKFGVRRVVLTSSISALVPNPGWPSGMPFDESSWTDIEYCKSRKARAEALNKQLLLTADFFYSKWYPVSKTLAEKSAWEFVENHGLDVVSILPATCLGPLLQPNLNASCAVLLQLLQGSQDSQEYHWLGAVHVKDIAKAQILLFESPTASGRYLCTNGIYQFSDFADKVSKICPQFPVHRFVGETQPGLVACKDAAKRLIDLGLVFTPLEVAIQDTLESLRSKGFLDQ 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11568652 11571946 + ClCG10G007670.2 Cla10g00724 282383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00724 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Cla10g00724 346 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 332 - -
Cla10g00724 346 Pfam NAD dependent epimerase/dehydratase family 10 267 IPR001509 -
Cla10g00724 346 Gene3D - 1 346 - -
Cla10g00724 346 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 332 - -
Cla10g00724 346 CDD FR_SDR_e 10 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00724 Cla-Chr10:11568652 Cla10g01236 Cla-Chr10:27110903 4.70E-72 dispersed
Cla03g00031 Cla-Chr3:320249 Cla10g00724 Cla-Chr10:11568652 2.79E-92 transposed
Cla11g01850 Cla-Chr11:32049816 Cla10g00724 Cla-Chr10:11568652 6.27E-06 transposed
Cla10g00724 Cla-Chr10:11568652 Cla02g01046 Cla-Chr2:21369239 8.05E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00724 - - cmo:103493282 612.838