Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00731 | ATGGCAGTCTCACAAAAGAAGATTGAGATCCTCCTCTTGTCAACTAGGGCACACGCAAAACTAAGGAAGAAAATCGCTAGATGTGACCTGGGTGTTCACTCTACCATTTTTCAGCTGTCATTGTGCTGCATAGGAGTCTCATTGTTCAAGTTCCATCTTCCCAGCATTTATTTAGTCTTAGCAATGGTTCTTGTTGGTTCTTTGCAACTGTCCTATCATTTGGGACCGTGGAGAAACTATTTGCATGAAGAAAATCTTAAGTTTACCTCTCAGAGCTATAACATACGACTACTGAATGTAGCTAGTCCATCGTCTCTTTTATTCCAGAAGAACACTTGGAGGACTCATTTATTTAGCATGAAATACCCACCTAATTACATTGTGCCTTCTAGATGCAATGTACTCAGGTGCCAGTCGTCATTGATGACAAACCAACCGCTGGATCCCCCTGGGATGAAGGCTGCTATAGTGGCATTGACAAGGTTTTGTAATGTATTAGGTGCTTGTCCTCCTCCGGTGGTTAATTTGGTTCCTGCGGCTTGTATTATCATGTTTGCTGTATGGGGTCTTGGACCATTTTTGCATTATACGAGAAGCCTATTCCATAATGATAATAACTGGAAGAAAAGTCGGACATATAACATCATGACCTTGTATCTTCAACCATTACTGCTGTGGACTGGAGCAACACTTATTTGCAGAGCTTTAGATCCAGTAGTTTTACCTACAGAGTCCAGCCAAGTTGTGAAGCAACGAGTGTTGAACTTTGTTAGGTCATTGTCCACTGTGCTGGCCTTTGCATATTGCTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGAGTACTGAATCCAGTGACGCGAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCCGTATGGGTTGCCGCTCTCTCATTGTTCATGGAGCTGTTGGGCTTTTCAACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTATTGCTGACATTAGCTGGCCGTGAGATTTTCACCAACTTCCTCTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAATGAGTGGATCCAAACGAAGATTGAGGGCTACGAAGTTTCTGGCACTGTTGAGCATGTAGGGTGGTGGTCGCCAACAATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAGTTCACCGTGAATGTCGTTAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTTGCCATTAGCCATTTGGACGTCAACAAAATCAATAACATTGTTGCAGACATGCGGAAAGTCTTGGCGAAGAACCCTCAAGTTGAACAACAGAGATTGCATAGAAGAGTATTTTTGGAAAACGTGGATCCTGAAAATCAGGCACTTTTGATTTTGATATCGTGTTTTGTTAAGACTTCACATTTTGAAGAATACCTTTGTGTAAAGGAAGCTATAATTTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGACTTGCAACACCAATCCGCACAATGCAGAAGATGCATAGTGATTCAGACATGGAAAGCGTTCCATTTTCTGATTCAATATTTGGCCACCGTGGTGCGACTTTGAATCGCCGCATGCTGATGATTGAGCCCCCTTACAAAGTTTATGGAGAAGATAGAAAGCAAAGCCATAGCAGGACATCACGCACAACGGGAGAACAAAATGGTAAGCCCGTTGCACGGTCATCGGGTGACAGCAAGGCTGCCAAAGAGACAATGTCATCTGATAGAAAGACAGAAGTCAAGACTGGAGGAGATGCTGATACAAAAATGCATCCCAAAGTTTCGATGTCAACCTCTGAAGATAAATCAAGCAATGAATTGAAACATAAACCATCATCAAGGTCTGCTGCAAGTACCAGTACCTCTGATATGCCAGATGCCAAAACAACTAAATTAGATGCTGATAATTCAATGGAAGATTGCAGTCCCAAGCAATCCGAAAATAGCTTGGGAAGTAACAAGCAGAACTTCAAGCCTTCCCTTCCTGTTGTTTCCTTTCCGGAAGATGTTAAGAAACCAGGAGGAACTACTTCAGCAGCAGCTTCACAGCCAAGGATAGAAGGTGAGCAGACAACAGTTTCAAATCCATCGGTAACAAAGCCTGGCGTGGAAGAGAATATAATCCTTGGTGTTGCTTTGGATGGCTCCAAGAGAACACTTCCTATTGAGGACGAAGTACCTACCGCATCGGGAGCAAAAGATTTGGCTGCATGCAGGAATGGGAACAGTGCGAATGGAGCAACAACGGCAGATAAGAACATGAAACGTCAGTCTCCTTCTTCCCCTACCACATCTTCTAGTGAATAG | 2373 | 43.07 | MAVSQKKIEILLLSTRAHAKLRKKIARCDLGVHSTIFQLSLCCIGVSLFKFHLPSIYLVLAMVLVGSLQLSYHLGPWRNYLHEENLKFTSQSYNIRLLNVASPSSLLFQKNTWRTHLFSMKYPPNYIVPSRCNVLRCQSSLMTNQPLDPPGMKAAIVALTRFCNVLGACPPPVVNLVPAACIIMFAVWGLGPFLHYTRSLFHNDNNWKKSRTYNIMTLYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAYCLSSMIQQAQKFFSESTESSDARNMGFQFAWKAVYSAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVDPENQALLILISCFVKTSHFEEYLCVKEAIILDLLRVIRHHRARLATPIRTMQKMHSDSDMESVPFSDSIFGHRGATLNRRMLMIEPPYKVYGEDRKQSHSRTSRTTGEQNGKPVARSSGDSKAAKETMSSDRKTEVKTGGDADTKMHPKVSMSTSEDKSSNELKHKPSSRSAASTSTSDMPDAKTTKLDADNSMEDCSPKQSENSLGSNKQNFKPSLPVVSFPEDVKKPGGTTSAAASQPRIEGEQTTVSNPSVTKPGVEENIILGVALDGSKRTLPIEDEVPTASGAKDLAACRNGNSANGATTADKNMKRQSPSSPTTSSSE | 790 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 11724317 | 11732126 | - | ClCG10G007730.1 | Cla10g00731 | 282390 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00731 | 790 | MobiDBLite | consensus disorder prediction | 698 | 723 | - | - | |
Cla10g00731 | 790 | Gene3D | - | 254 | 357 | - | - | |
Cla10g00731 | 790 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 62 | 780 | IPR045042 | - | |
Cla10g00731 | 790 | MobiDBLite | consensus disorder prediction | 555 | 723 | - | - | |
Cla10g00731 | 790 | MobiDBLite | consensus disorder prediction | 751 | 790 | - | - | |
Cla10g00731 | 790 | Gene3D | - | 359 | 414 | IPR023408 | - | |
Cla10g00731 | 790 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC | 62 | 780 | - | - | |
Cla10g00731 | 790 | MobiDBLite | consensus disorder prediction | 663 | 682 | - | - | |
Cla10g00731 | 790 | SUPERFAMILY | Sm-like ribonucleoproteins | 343 | 413 | IPR010920 | - | |
Cla10g00731 | 790 | MobiDBLite | consensus disorder prediction | 763 | 790 | - | - | |
Cla10g00731 | 790 | MobiDBLite | consensus disorder prediction | 632 | 649 | - | - | |
Cla10g00731 | 790 | MobiDBLite | consensus disorder prediction | 591 | 610 | - | - | |
Cla10g00731 | 790 | Pfam | Mechanosensitive ion channel | 301 | 507 | IPR006685 | GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00153 | Cla-Chr5:1423111 | Cla10g00731 | Cla-Chr10:11724317 | 2.14E-12 | dispersed | |
Cla08g01164 | Cla-Chr8:24475189 | Cla10g00731 | Cla-Chr10:11724317 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00731 | K22047 | - | csv:101217250 | 1275.38 |