Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00773 ATGGCTGCCAATTTCGCCATGCTTAAACCTTGTTCGGCATTTTCGACTTCATCATCCGTTCAGAGGAAATTTCGTGCGCATAAATCACTATGCACTGCCCCATGTTCCTCTTTTTATCCACAATGTCAAGGAGGAGCTTATGGTTTATGTGCCGTTAAATGTGCTTCTTCAAATGGGAAGGGGCCTGATTCCCTGGATAATGGAGTTAAAAAAGTGGAGAGGTTACTTGAAGAGAAACGGCGGGCTGAATTGTCTGCTCGGATCGCTTCTGGCGAATTTACAGTCGAAAAAACTGGTTTTCCATCTATATTGAGGAGTGGGTTGTCAAAGTTGGGTGTTCCCAGTGAGATTCTGGATTTACTATTTGGTTTCGTCAATGCTCAAGAAGAATATCCCAAGATCCCAGAAGCTAAAGGATCAATAAGTGCAATTCGTAGTGAGGCTTTCTTCATACCTCTGTATGAGCTTTATCTCACGTATGGTGGAATATTTAGATTGACTTTTGGGCCAAAGTCGTTCTTGATAGTGTCTGATCCTTCCATTGCTAAACATATACTGAAGGATAATCCAAAGAACTATTCTAAGGGTATCTTAGCTGAAATTCTTGACTTCGTCATGGGGAAGGGGCTTATACCAGCTGATGGGGAGATATGGCGTGTACGAAGAAGGGCTATAGTCCCTTCTTTGCATATGAAGTATGTAGGAGCTATGATTAATCTTTTTGGAGAAGCTGCAGATAGGCTTTGCAAGAAGCTAGATGCTGCAGCATCTGATGGAGTAGATGTGGAAATGGAGTCCCTATTCTCCCGTTTGACTTTAGATATCATTGGCAAGGCAGTTTTTAACTATGACTTTGATTCACTTACAAATGATGCTGGCATAGTTGAGGCTGTTTATACTGTGCTAAGAGAAGCAGAAGATCGCAGTGTTGCGCCAATTCCGGTATGGGAAATTCCAATTTGGAAGGATATTTCACCACGGCAAAAAAAGGTCTCCAAAGCCCTCAAATTGATCAATGGCACTCTTGATCAACTAATTGCTATATGCAAGAGGATGGTTGATGAGGAGGAACTGCAGTTTCATGAGGAATACATGAATGAGCAAGATCCTAGCATCCTTCATTTCCTTTTGGCATCAGGAGATGATGTTTCGAGCAAGCAGCTTCGTGATGACTTGATGACCATGCTTATAGCTGGGCATGAAACATCTGCTGCAGTCTTAACATGGACCTTTTATCTTCTTTCGAAGGAGCCTAGGGTCATGGCCAAGCTCCAAAAGGAGGTTGACTCAGTCCTTGGGGATCGTTTTCCAACCATTGAAGATATGAAGAACCTCAAATATGCCACACGAATAATTAATGAATCCTTGAGGCTTTACCCACAGCCCCCAGTTTTAATACGTCGATCCCTTGATAACGATATGCTCGGGAAGTACCCCATAAAGAAGGGTGAGGACATATTCATATCTGTTTGGAACTTGCATCGCAGTCCAGAACTTTGGGATGATGCAGATAAGTTTAATCCTGAAAGGTGGCCCTTGGATGGACCCAATCCTAATGAGACAAATCAAAATTTCAGATATTTGCCTTTTGGTGGTGGACCACGGAAATGTGTGGGAGACATATTTGCTTCATATGAGACTGTTGTAGCACTTGCCATGCTTGTACGGCGATTTGACTTCCAAATAGCACTTGGAGCACCTCCAGTAAAAATGACAACAGGAGCTACAATTCACACAACAGATGGATTGCAAATGACAGTTACACGAAGAATGAAACCTCCAATCATACCCACTTTAGAGGTGCCTGAAATGGTCGTTGATTCATCTGTCAGTTTCTTGAAAGATGAAACACAAATTGTTCAAGAAGGAGAAGTTTCTTCTGCACATTCCTAA 1893 42.37 MAANFAMLKPCSAFSTSSSVQRKFRAHKSLCTAPCSSFYPQCQGGAYGLCAVKCASSNGKGPDSLDNGVKKVERLLEEKRRAELSARIASGEFTVEKTGFPSILRSGLSKLGVPSEILDLLFGFVNAQEEYPKIPEAKGSISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNPKNYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVGAMINLFGEAADRLCKKLDAAASDGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDAGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRQKKVSKALKLINGTLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVMAKLQKEVDSVLGDRFPTIEDMKNLKYATRIINESLRLYPQPPVLIRRSLDNDMLGKYPIKKGEDIFISVWNLHRSPELWDDADKFNPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDIFASYETVVALAMLVRRFDFQIALGAPPVKMTTGATIHTTDGLQMTVTRRMKPPIIPTLEVPEMVVDSSVSFLKDETQIVQEGEVSSAHS 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14294133 14302039 + ClCG10G008080.1 Cla10g00773 282432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00773 630 Pfam Cytochrome P450 154 574 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 530 539 IPR017972 GO:0005506|GO:0016705
Cla10g00773 630 PANTHER CYTOCHROME P450 FAMILY 4 85 594 - -
Cla10g00773 630 Gene3D Cytochrome P450 132 596 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS E-class P450 group I signature 537 560 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS E-class P450 group I signature 407 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS E-class P450 group I signature 489 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS E-class P450 group I signature 387 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS E-class P450 group I signature 527 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS E-class P450 group I signature 157 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS P450 superfamily signature 537 548 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS P450 superfamily signature 528 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS P450 superfamily signature 398 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g00773 630 PANTHER - 85 594 - -
Cla10g00773 630 SUPERFAMILY Cytochrome P450 145 590 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00941 Cla-Chr4:24463836 Cla10g00773 Cla-Chr10:14294133 2.52E-155 dispersed
Cla07g01042 Cla-Chr7:26882960 Cla10g00773 Cla-Chr10:14294133 1.88E-112 dispersed
Cla10g00773 Cla-Chr10:14294133 Cla05g01247 Cla-Chr5:14366775 3.21E-39 dispersed
Cla10g00773 Cla-Chr10:14294133 Cla11g00521 Cla-Chr11:5953819 3.12E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00773 K15747 - csv:101215492 1161.75