Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00776 ATGCAGCTTCTTCTCCTTCTCTTTCTCCTTCTTCACCTCCATCTTCATCTCTCCCTTTCTTCTCACTTGCCTGAATATCGCGCTCTTCTCTCTCTCAAGAGCTCGTTTTCCGATGACTCCCAATCGCCGCTCTCCACTTGGGACGCCGCCACTGCCCACTGTACTTGGACCGGAGTCACCTGCGATTTCCGTCGCCACGTCGTCGGCCTCGACCTTGCAGGATTGAATCTCTCTGGTACTCTCTCTCCTGACCTGGGTTCTCTCCGGTTTCTCTCTAATCTCTCCCTCCCGTCCAATCAGATTTCCGGCCCCATTCCGCCGGAGATCTCTGCCATCTCTACACTTAAATACCTTAACCTCTCTAACAATCTCATTAATGGTACATTGCCCTTGCAACTCTCCTTGCTCAACAATCTGGAGGTTCTTGATTTGTATAACAATAATATGTCTGGGAACTTGCCGCTTGTGGTCATACAGTTGCCAAATCTCCGCCATTTGCATCTCGGGGGGAACTTCTTCTCCGGTGTGATTCCGCCGGGGTATGGAATGTGGCAGTTCATGGAGTATTTGGCGGTGTCTGGAAATGAGCTTCAAGGTCCGATCCCGCCGGAGATTGGTAATCTGACGAAGCTTCGTGAACTTTACATTGGGTATTATAATACCTACGACGGCGGTTTGCCGCCGGAAATTGGAAACTTATCGGAACTGGTTCGATTGGATGCTGCTAACTGTGGGTTGACGGGTGAGATCCCTCGCGAACTTGGAAAACTTAAGAAATTGGATACTCTGTTTCTTCAGGTGAACGGCTTTTCTGGGCCTTTGATTCCAGAACTTGGGAGCTTAACGGGATTGAAATCCATGGATTTATCTAACAACATTCTTGTTGGTGAGATTCCGGAGTCATTCTCTCAACTGAAGAACTTGACGCTTTTGCATCTTTTCAGGAATAAGCTTCATGGAGCTATTCCACAGTTCATCGGTGAGTTGCCGGAGCTGGAAGTGTTGCAGTTGTGGGAAAATAACTTCACTGGTTCTATTCCTTATAGTTTGGGGAAGAATGGGAAGCTCGTTGTTCTCGACATTTCATCAAACAAGTTGACTGGAACTTTGCCTCCCGATATGTGCAATGGAAATAAACTTCAAACTCTGATAACCCTCGGTAATTTCTTGTTTGGTCCAATCCCTGAATCTCTTGGTAGATGCGAGTCGTTGAGCCGTATTCGAATGGGGGAGAATTTTCTCAATGGTTCCATCCCGAACGGTCTTTTCGGTTTGCCTAATCTTTCTCAAGTTGAGTTGCAGAACAATTTTCTCACCGGAGAATTTCCAGTCACTGATTCCGTCTCGGCAAATCTCGGCCAAATTAGTCTCTCAAACAATCGGCTCTCGGGATCCCTTCCATCGATGGTTGGAAATTTCTCCGGCGTCCAGAAGCTTCTACTCGATGGGAACAAATTCTCCGGCCAAATCCCACCTGAAATCGGACGGTTACAGCAGCTGTCAAAGATTGATTTCAGCCACAACAAATTCTCCGGTCCAATCGCTCCGGAGATCAGCCAATGTAAGCTCTTAACCTTCGTCGATCTCAGTCGTAACGAACTCTCGGGTGAGATTCCGAATGAAATCACCGCAATGAGGATATTGAACTATCTGAATCTCTCAAGAAATCACTTAATCGGAAGCGTTCCTGCTTCAATATCCTCAATGCAGAGCTTAACATCTGTTGATTTTTCATATAACAATCTCTCTGGTTTAGTTCCGGGCACGGGCCAGTTTAGCTACTTCAACTACACTTCATTTCTAGGCAACCCAGATCTCTGCGGTCCGTACTTAGGACCTTGCAAAAATGGGGTCGGCAATGGCACACAGCAGCCTCATTTAAAAGCCTCACTCTCTTCTTCTGTGAAACTTCTGCTTGTCATTGTTTTGCTCGTCTGCTCGATCGCATTTGCCATTGCAGCAATCATCAAAGCTCGGTCGCTAAAACGAGCAAGCGGGTCTCGAGCTTGGAAATTAACCGCATTCCAAAGACTAGATTTCACAGCAGATGACATTTTGGACTGTTTGAAAGAGGACAACATTATTGGGAAAGGAGGTGCTGGGATAGTTTACAAAGGTTTTATGCCGAGTGGCGATCACATCGCTGTGAAAAGACTGCCGGCGATGGGGCGAGGATCATCCCATGACCATGGATTCAATGCTGAGATACAGACTTTGGGGAGGATTAAACATCGTCACATTGTTAGATTATTGGGTTTCTGCTCAAACCATGAAACCAATCTTCTGGTTTATGAGTATATGCCTAATGGGAGTTTAGGGGAAGTTCTACACGGGAAGAAAGGTGGGCATTTGCAATGGGACACAAGGTATAAGATCGCCATTGAAGCTGCTAAAGGTCTTTGCTATTTACATCATGACTGTTCGCCATTGATTGTCCATCGAGATGTAAAATCAAACAACATTCTTCTGGATTCTGATTATGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTTCAGGATTCAGGCACATCAGAGTGTATGTCCGCCATAGCTGGTTCTTACGGATACATAGCTCCAGAATATGCCTATACATTGAGAGTAGACGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTACTCTTAGAATTGGTGAGTGGGCGGAAGCCCGTCGGAGAATTTGGCGATGGGGTCGACATAGTTCAGTGGGTCAGGAAAATGACTAGTCCCAACAATGAAGGGGTAGCGAAAATCATAGATCCACGGCTCTCCTCAGTCCCGCTGAATGAAGTAACTCATGTATTCTATGTAGCAATGCTATGTGTGGAAGACCAAGCCGTGGAGAGGCCAACAATGAGAGAAGTAGTTCAAATCCTCACAGAACTCCCAAGGCCACCAACTTCAAAACAAATAAACTCAAAAGAAGCCGAAGTAACAACCCCGACGCTGCTGCCATCGTCCCCAGTGGTGGCATTAGATTCACCGAACAAAGCACAGCCACCACCTGATCTTCTGAGCATTTGA 3027 46.35 MQLLLLLFLLLHLHLHLSLSSHLPEYRALLSLKSSFSDDSQSPLSTWDAATAHCTWTGVTCDFRRHVVGLDLAGLNLSGTLSPDLGSLRFLSNLSLPSNQISGPIPPEISAISTLKYLNLSNNLINGTLPLQLSLLNNLEVLDLYNNNMSGNLPLVVIQLPNLRHLHLGGNFFSGVIPPGYGMWQFMEYLAVSGNELQGPIPPEIGNLTKLRELYIGYYNTYDGGLPPEIGNLSELVRLDAANCGLTGEIPRELGKLKKLDTLFLQVNGFSGPLIPELGSLTGLKSMDLSNNILVGEIPESFSQLKNLTLLHLFRNKLHGAIPQFIGELPELEVLQLWENNFTGSIPYSLGKNGKLVVLDISSNKLTGTLPPDMCNGNKLQTLITLGNFLFGPIPESLGRCESLSRIRMGENFLNGSIPNGLFGLPNLSQVELQNNFLTGEFPVTDSVSANLGQISLSNNRLSGSLPSMVGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPNEITAMRILNYLNLSRNHLIGSVPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKNGVGNGTQQPHLKASLSSSVKLLLVIVLLVCSIAFAIAAIIKARSLKRASGSRAWKLTAFQRLDFTADDILDCLKEDNIIGKGGAGIVYKGFMPSGDHIAVKRLPAMGRGSSHDHGFNAEIQTLGRIKHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSDYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTSPNNEGVAKIIDPRLSSVPLNEVTHVFYVAMLCVEDQAVERPTMREVVQILTELPRPPTSKQINSKEAEVTTPTLLPSSPVVALDSPNKAQPPPDLLSI 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14753611 14757340 + ClCG10G008110.1 Cla10g00776 282435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00776 1008 MobiDBLite consensus disorder prediction 967 994 - -
Cla10g00776 1008 SMART serkin_6 689 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00776 1008 SUPERFAMILY L domain-like 23 220 - -
Cla10g00776 1008 Gene3D Ribonuclease Inhibitor 379 615 IPR032675 -
Cla10g00776 1008 Gene3D Transferase(Phosphotransferase) domain 1 767 981 - -
Cla10g00776 1008 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Cla10g00776 1008 Gene3D Ribonuclease Inhibitor 132 220 IPR032675 -
Cla10g00776 1008 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Cla10g00776 1008 Pfam Leucine Rich Repeat 162 179 IPR001611 GO:0005515
Cla10g00776 1008 Pfam Leucine Rich Repeat 284 305 IPR001611 GO:0005515
Cla10g00776 1008 Gene3D Phosphorylase Kinase; domain 1 657 766 - -
Cla10g00776 1008 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 999 - -
Cla10g00776 1008 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 999 - -
Cla10g00776 1008 SUPERFAMILY Protein kinase-like (PK-like) 685 960 IPR011009 -
Cla10g00776 1008 MobiDBLite consensus disorder prediction 967 1008 - -
Cla10g00776 1008 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g00776 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Cla10g00776 1008 Gene3D Ribonuclease Inhibitor 221 378 IPR032675 -
Cla10g00776 1008 Gene3D Ribonuclease Inhibitor 24 131 IPR032675 -
Cla10g00776 1008 SUPERFAMILY RNI-like 225 587 - -
Cla10g00776 1008 SMART LRR_typ_2 160 183 IPR003591 -
Cla10g00776 1008 SMART LRR_typ_2 497 521 IPR003591 -
Cla10g00776 1008 SMART LRR_typ_2 569 592 IPR003591 -
Cla10g00776 1008 SMART LRR_typ_2 329 353 IPR003591 -
Cla10g00776 1008 SMART LRR_typ_2 281 305 IPR003591 -
Cla10g00776 1008 SMART LRR_typ_2 354 377 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01760 Cla-Chr1:32501800 Cla10g00776 Cla-Chr10:14753611 0 dispersed
Cla04g00062 Cla-Chr4:2025430 Cla10g00776 Cla-Chr10:14753611 4.60E-148 dispersed
Cla05g01860 Cla-Chr5:30478596 Cla10g00776 Cla-Chr10:14753611 0 dispersed
Cla10g00664 Cla-Chr10:10116055 Cla10g00776 Cla-Chr10:14753611 0 dispersed
Cla11g00330 Cla-Chr11:3754092 Cla10g00776 Cla-Chr10:14753611 6.34E-156 dispersed
Cla10g00776 Cla-Chr10:14753611 Cla01g01761 Cla-Chr1:32517304 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80850 PF07714 PK_Tyr_Ser-Thr 2.10E-45 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00776 - - cit:102608073 1595.87