Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00791 | ATGGTGAGATACCTAAGGGACATGGACATCAACAATTCTTCGACACTGTTCAACGTCACACTACAAAGAAAAGGTGGATATGTTATAATGGACAATGGCATTGTCCTAGTTACTCTTTCAACTCCAGATGGCGACGTTATTGGATTGAGCTACAATGGAATCGACAACATTCTCGAAACCAAAAACGATGAGCAAAACAGAGGCTACTGGGACGCCGTATGGAACAACCCAGACGAACCCATTACCACGGACAGATTAAAAGGAGAGAGTTTTGAAGTAATAGTAACGAACGAGGAACAACTGGAAATATCGTTTAAGAAAACATGGAGTTTTGCAGTTGGGAACGAGACGGCCCCCGTAAATGTAGACAAAAGGTATGTATTGCTGAGAGGAAGCTCTGGGTTTTATAGTTATGCAATATTCGAGAGGCCCATTGGTTGGCCCCAGATTGAAATGGATCAAGTTAGGATTGTTTACAAGCTTCAAAGCACAATGTTTGATTATATGGCTGTGTCGGACGATAGGCAAAGGGTGATGCCCACAATGAGAGACCGTGAAAATGGTGAGCCATTGGCTTATCCCGAGGCCGTTCTTTTGACTAATCCTACCAATGAAGAACTCAGAGGAGAGGTGGATGACAAGTACCAGTACTCAACAGAGGACAAGGACAACCAAGTTCACGGCTGGATCTGCAGCGATCCGCCGGTGGGATTCTGGATGATCACTCCCAGCGACGAGTTCCGGGTCGCCGGTCCTGTCAAGCAGGATCTCACCTCCCACGCCGGCCCCATCACTCTCTCCATGTTCGTTAGCACCCACTACGCTGGAAAGGACATTGGCATGAGATTTGCAGCTGGAGAGCCCTGGAAGAAGGTCTTCGGCCCTATCTTTGTCTATCTCAACTCTGTTTCCCCTGAAGAGGATTCTCTATCCCTCTGGCAAGATGCCAAACAACAGTTGGCAATAGAAATCAATGAGTGGCCCTACTCTTTTCCTCAATCAGAAGACTTCCCTTCTTCTGCCCAAAGAGGGAGTGTCACTGGCCGTAGCAAACTCATGCGGGCGAGTAATGCTTTCGTTGGATTGGCATTGCCTGGTCCTGTGGGATCTTGGCAAACGGAAACCAAGGGCTATCAGTTCTGGACTCGAGCTGACAATCACGGCAACTTCTTAATCAATAACATCCGAGCTGGGGTTTACAATCTGTATGCTTTTGTCCCTGGCTTCATTGGAGACTACAAATACGAAGCAAATATTACAATTGAGCTCGGGTCTGAAATCAGATTGGATGTGATGGTGTTTGATCTGCCGAGACAAGGCCCAACCATCTGGGAGATTGGCATTCCCGATCGCACTGCAGCAGAGTTTTATGTGCCCGATCCTTATCCGACTCTCATGAATAAACTGTACAACAACCATGCTGACAAGTTCAGACAATATGGCTTGTGGGAACGTTATGCGGCTATGTATCCAAATAATGATCTTGTGTTTACCGTCGGTGTTGACGATTATACAAGGGACTGGTTCTATGCTCATGTTAACAGGAATGTGGGGAATCAAACATACCAATCGACCACTTGGGAGATCAGATTTTTATTGCAATCTGTGAACCAAACGGCAAATTACACACTGCAAATTGCATTAGCATCTGCTGCTGAATGCGAATTACAGTCTCAGGCGGAAGATTCATTTCAACTGATAGTCTGTTATGTTGTCGATTTGAAGGTTCGATTAAACGATCGAGAATCAGAGCAGGCTGCTTTCTCGACAGGGAAGATCGGAAAGGACAATGCGATTGCAAGGCATGGCATACATGGACTTTACTGGTTATACTCCATACCTCTCCCTGGTGATCAATTTCTACAAGGGAACAACTCCATCTATCTCACTCAGGCAAGAAGCGAAAGCCCTTTCGAAGGTCTCATGTACGACTACATTCGACTTGAAGCTCCACCTCCAACATAA | 1965 | 46.11 | MVRYLRDMDINNSSTLFNVTLQRKGGYVIMDNGIVLVTLSTPDGDVIGLSYNGIDNILETKNDEQNRGYWDAVWNNPDEPITTDRLKGESFEVIVTNEEQLEISFKKTWSFAVGNETAPVNVDKRYVLLRGSSGFYSYAIFERPIGWPQIEMDQVRIVYKLQSTMFDYMAVSDDRQRVMPTMRDRENGEPLAYPEAVLLTNPTNEELRGEVDDKYQYSTEDKDNQVHGWICSDPPVGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFVSTHYAGKDIGMRFAAGEPWKKVFGPIFVYLNSVSPEEDSLSLWQDAKQQLAIEINEWPYSFPQSEDFPSSAQRGSVTGRSKLMRASNAFVGLALPGPVGSWQTETKGYQFWTRADNHGNFLINNIRAGVYNLYAFVPGFIGDYKYEANITIELGSEIRLDVMVFDLPRQGPTIWEIGIPDRTAAEFYVPDPYPTLMNKLYNNHADKFRQYGLWERYAAMYPNNDLVFTVGVDDYTRDWFYAHVNRNVGNQTYQSTTWEIRFLLQSVNQTANYTLQIALASAAECELQSQAEDSFQLIVCYVVDLKVRLNDRESEQAAFSTGKIGKDNAIARHGIHGLYWLYSIPLPGDQFLQGNNSIYLTQARSESPFEGLMYDYIRLEAPPPT | 654 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 16105616 | 16116155 | + | ClCG10G008270.2 | Cla10g00791 | 282450 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00791 | 654 | SUPERFAMILY | Galactose mutarotase-like | 30 | 303 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
Cla10g00791 | 654 | Gene3D | - | 17 | 307 | IPR014718 | GO:0030246 | |
Cla10g00791 | 654 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 24 | 652 | - | - | |
Cla10g00791 | 654 | SUPERFAMILY | Starch-binding domain-like | 341 | 432 | IPR013784 | GO:0030246 | |
Cla10g00791 | 654 | Pfam | Rhamnogalacturonate lyase family | 15 | 211 | IPR010325 | - | |
Cla10g00791 | 654 | CDD | RGL4_M | 342 | 429 | IPR029413 | - | |
Cla10g00791 | 654 | Pfam | Polysaccharide lyase family 4, domain III | 442 | 648 | IPR029411 | - | |
Cla10g00791 | 654 | Pfam | Polysaccharide lyase family 4, domain II | 356 | 428 | IPR029413 | - | |
Cla10g00791 | 654 | Gene3D | - | 339 | 432 | - | - | |
Cla10g00791 | 654 | CDD | RGL4_N | 25 | 309 | - | - | |
Cla10g00791 | 654 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 24 | 652 | - | - | |
Cla10g00791 | 654 | Gene3D | - | 440 | 649 | - | - | |
Cla10g00791 | 654 | SUPERFAMILY | Galactose-binding domain-like | 440 | 649 | IPR008979 | - | |
Cla10g00791 | 654 | CDD | RGL4_C | 444 | 649 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g01151 | Cla-Chr8:24302411 | Cla10g00791 | Cla-Chr10:16105616 | 0 | dispersed | |
Cla10g00791 | Cla-Chr10:16105616 | Cla11g01437 | Cla-Chr11:27980311 | 0 | dispersed | |
Cla10g00791 | Cla-Chr10:16105616 | Cla01g01783 | Cla-Chr1:32779400 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00791 | K18195 | - | csv:101215252 | 1197.96 |