Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g00795 | ATGGGTTTGGATGATTTTTGTCAAACAGGCTTGGTGTTGGGCTTAGGGCTCTCTAATGATCAAAGGTTGAAGAAGAAGCCTACACCTTGCTCCTCTAGTTCCCTTGATTTTGAGCCTTGTGCTTTGACTTTGGGATTTTCCGGCACTGGAGGCGGCAGCGAAACTCACCAGAAAGTTATTGATGTCAACAACAAGATGATGATGATTAATAACAACAACTCTGATGTGGGTGTTCATCATTTGCATCGACAAGAAGCTTCCACTCATAGCAGCAGCGCTGTTTGTTCTTCCTTCTCCGGCGGCGGTAGGGTTAAAAGGGAGAGAGATCTTAGCAGCGAAGAAGTTCAATTGGACAGACTTTCTTCTAGAGTTAGTGATGAAGATGAAGATGGTTCTAATGCTAGAAAGAAACTTAGGCTCTCTAAACAACAAGCCGCTCTCTTGGAACAAAGTTTCAAGCAAAATAGCACCCTCAATCCTAAGCAAAAACAAGCCTTGGCGAGACAGCTAAATCTACGGCCACGACAAGTTGAAGTATGGTTTCAAAATAGGAGAGCTCGAACAAAACTGAAACAAACAGAAGTAGACTGTGAGTTATTGAAGAAGTGTTGTGAGACGTTGACAGATGAAAATAGAAGGCTACAAAAGGAGCTTCAAGAATTGAAGTCGTTAAAGCTGGCTCAACCACTATACATGCAGATGCCGGCGGCGACATTAACTATATGCCCCTCCTGCGAAAGGCTCGGCAGCGGCGGCGGCGCTTCCAAACCCAAATTTTCAATGGCTCCTACGCCTCACTTTTACAACCCCTTCTCCAGTCCTTCCGCCGCATGTTAG | 837 | 45.16 | MGLDDFCQTGLVLGLGLSNDQRLKKKPTPCSSSSLDFEPCALTLGFSGTGGGSETHQKVIDVNNKMMMINNNNSDVGVHHLHRQEASTHSSSAVCSSFSGGGRVKRERDLSSEEVQLDRLSSRVSDEDEDGSNARKKLRLSKQQAALLEQSFKQNSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTDENRRLQKELQELKSLKLAQPLYMQMPAATLTICPSCERLGSGGGASKPKFSMAPTPHFYNPFSSPSAAC | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 17043236 | 17044586 | - | ClCG10G008310.1 | Cla10g00795 | 282454 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g00795 | 278 | MobiDBLite | consensus disorder prediction | 81 | 137 | - | - | |
Cla10g00795 | 278 | ProSitePatterns | 'Homeobox' domain signature. | 166 | 189 | IPR017970 | GO:0000981|GO:0006355 | |
Cla10g00795 | 278 | Gene3D | - | 139 | 189 | - | - | |
Cla10g00795 | 278 | Pfam | Homeobox associated leucine zipper | 191 | 224 | IPR003106 | GO:0006355|GO:0043565 | |
Cla10g00795 | 278 | MobiDBLite | consensus disorder prediction | 102 | 137 | - | - | |
Cla10g00795 | 278 | SUPERFAMILY | Homeodomain-like | 122 | 192 | IPR009057 | - | |
Cla10g00795 | 278 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22-LIKE | 6 | 278 | - | - | |
Cla10g00795 | 278 | ProSiteProfiles | 'Homeobox' domain profile. | 131 | 191 | IPR001356 | GO:0003677 | |
Cla10g00795 | 278 | SMART | halz | 191 | 234 | IPR003106 | GO:0006355|GO:0043565 | |
Cla10g00795 | 278 | Coils | Coil | 197 | 227 | - | - | |
Cla10g00795 | 278 | SMART | HOX_1 | 133 | 195 | IPR001356 | GO:0003677 | |
Cla10g00795 | 278 | Pfam | Homeodomain | 135 | 189 | IPR001356 | GO:0003677 | |
Cla10g00795 | 278 | PANTHER | - | 6 | 278 | - | - | |
Cla10g00795 | 278 | CDD | homeodomain | 135 | 192 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01751 | Cla-Chr1:32436325 | Cla10g00795 | Cla-Chr10:17043236 | 8.57E-102 | dispersed | |
Cla05g01809 | Cla-Chr5:30009259 | Cla10g00795 | Cla-Chr10:17043236 | 2.38E-70 | dispersed | |
Cla06g01380 | Cla-Chr6:27309972 | Cla10g00795 | Cla-Chr10:17043236 | 2.37E-56 | dispersed | |
Cla09g00345 | Cla-Chr9:3389307 | Cla10g00795 | Cla-Chr10:17043236 | 4.63E-67 | dispersed | |
Cla10g00795 | Cla-Chr10:17043236 | Cla10g01206 | Cla-Chr10:26697926 | 2.60E-51 | dispersed | |
Cla10g00795 | Cla-Chr10:17043236 | Cla10g01677 | Cla-Chr10:32506524 | 1.58E-66 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61862 | PF00046 | Homeodomain | 5.20E-16 | CL0123 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g00795 | K09338 | - | csv:101205848 | 370.548 |