Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00882 ATGGCCGAGGCTGAATTGGAGAGGGGCGACGCCAATTGCGGCCTTGCTTCCATGGATTCCTCCGAGTCCCGATGGGTTTTTCAGGATGAAGATCAATCGGAGATCGACGACGACGACGACGACGAGGATAATGCAACGCGCCATCGTATGGATTTGGAATCTGAGGATGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCTTTCGATGTCGAAGCCCTTGACGTCCCTGGTGCCCATAGAAATGAATACGAGGACTTCAGCGTAGGAAAGAAAATTGCTCTTGCTTTTCAGACCCTTGGAGTCGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGACGAAGATGTGATTGGGGCATTATCGCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTCTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCGAATCAACTGCCTTCGGATACCCGAATATCAAGTTTTAGATTAAAGGTGCCATCAGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCCTGACCTTGAAGAAGCTTCTTTTGATGCTTGTTCTTGCTGGAACTGCTATGGTAATAGCCGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCGGCTGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTCTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTATTTATATGGTTTTGTACACTTGCAGGCATTGGGATTTATAACCTTGTCATATATGATAGCAGTGTACTGAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTGTGTGCTACAGACCTTAGTAACTTGGGTCTATCAGCCTCCTACAGGAAATTCATCGTTGTGCTTTCAAGCAATATCATGACCTTGCTACAAGTGGATCCTAGAACTTCAGGAATCTTTCTATCCCAATTTTCATCTACACGATTCCCAGGCCTGAGGACTTTGCGAGCATGGAGATTTTCAACTTCTTATTTTATATTTGACCATCAACTACCAGGTTCCGAGGCAATGTTTGCAGATCTTTGCTATTTCTCTGTGCGGTCAATACAGCTTACATTTGTGTTTCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCACAATGGAGCTGACCACGTATTTTTTAATTCTGTTCCCAAAAGTGCCTTTTGGCCAGTTTTTCTCATTGCCAATGTTGCTGCATTGATTGCCAGTCGGGCAATGACTACGGCTACCTTTTCATGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATTATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCTGTTTGCCTGGTGGTCGTCTGCTCCATATCTAGCATGTATGAGATTGGAAATGCATATGGTATTGCTGAGCTGGGAGTGATGATGATGACAACTGTCTTGGTTACCATTGTTATGCTTCTTATATGGCAGATTAACATTATCATCGTTATGGTTTTTGCGATGATCTTTCTTGGGATAGAACTAATATTTTTCTCGTCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTATTCGCAGTAATTATGTTTTTCATTATGTATATTTGGAACTACGGAAGCAAGCTCAAATATGAAACTGAAGTGAAGCAAAAGCTGTCAATGGATTTAATGCGAGAACTAGGGTGCAATCTCGGGACAATCAGAGCTCCTGGCATTGGTTTGCTTTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCAGTTCATTCAATGATCATATTTGTCTGCATCAAGTACGTACCAGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGCTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGTTCGAAAAGAAAATCATCAGACGTTTGAGCAGCTCTTAATTGAAAGCCTTGAGAAATTCATCCGTAGAGAAGCACAAGAAAGGTCATTAGAGAGCGATGGAGATGATGATACTGATTCCGACGAGACCCGCTGCTCGCGATTTCTCGTGGGTCCCAATGGAAGTGTGTATTCGCTTGGCATTCCTCTCCTTGCTGAATTCAACGAGCCTACTAGACCCATAACTGAAGTCATCAACGTACCAGAAGAGGTGCAGCCAGTGGAATCTCCAGACCCCTCGATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCTTTTATACGAAAGGCTAAAGAATCAGGAGTTGTTTACCTTCTTGGTCATGGAGATATTAGAGCACGAAAGGATTCTTGGTTTATTAAGAAGCTTATGATCAATTACTTCTATGCATTTTTAAGAAAGAACAGCAGGAGGGGTATTGCCAACTTGAGTGTACCCCACACCCACCTGATGCAGGTTGGCATGACATACATGGTTTAG 2748 42.54 MAEAELERGDANCGLASMDSSESRWVFQDEDQSEIDDDDDDEDNATRHRMDLESEDEDNVEQKLIRTGPRIDSFDVEALDVPGAHRNEYEDFSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLVIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATDLSNLGLSASYRKFIVVLSSNIMTLLQVDPRTSGIFLSQFSSTRFPGLRTLRAWRFSTSYFIFDHQLPGSEAMFADLCYFSVRSIQLTFVFLVLPCLFLGYLGQAAYLISNHNGADHVFFNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLVTIVMLLIWQINIIIVMVFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSDETRCSRFLVGPNGSVYSLGIPLLAEFNEPTRPITEVINVPEEVQPVESPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20126885 20141652 - ClCG10G009240.1 Cla10g00882 282541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00882 915 MobiDBLite consensus disorder prediction 1 59 - -
Cla10g00882 915 Pfam K+ potassium transporter 422 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla10g00882 915 Pfam K+ potassium transporter 101 353 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla10g00882 915 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 422 914 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla10g00882 915 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 357 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla10g00882 915 PANTHER POTASSIUM TRANSPORTER 7 18 357 - -
Cla10g00882 915 MobiDBLite consensus disorder prediction 42 59 - -
Cla10g00882 915 PANTHER POTASSIUM TRANSPORTER 7 422 914 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00882 Cla-Chr10:20126885 Cla11g00037 Cla-Chr11:492278 7.05E-105 dispersed
Cla10g00882 Cla-Chr10:20126885 Cla09g01844 Cla-Chr9:36099892 5.08E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00882 - K03549 sstn:125853484 1268.83