Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g00893 ATGGAAAGCTTTGCTCTCCAATCTGTCTCCACTACTACTTCTTTTTCCCCCCATTCTCCCATTTCTCGAATTTCTCTCCTCCATCGCTCGAAACCCATTTCCCATTCCCTCTCGTCTCCCACTTCCCTTCATTTTTCTCGCTCGATTTCGCTATTTCAATCCACCCCACCAATCTCCCAATCCCCCCTTTTCACTTCTCGGTCTTCCCTTTTCAATCCCCTCTTCAATCCCAAATTGCGTCGAGCCTTTCCAATGCGAACCAGTGCCTCTCAATCGCCCGATAATCAGTCATTGCCACCGAACCCACCTCCCCGACAAGGTGCTAAGCCAATCCCTTTTCTGATTTCCATCGCTATTGGCCTCATTGTTCGTTTTGCCGTCCCCAAACCGGTGGAGGTTTCAGCTCAAGCCTGGCAGTTGCTCTCGATTTTCTTATCGACTATTGCTGGACTCGTTTTGAGTCCCTTGCCGGTTGGTGCTTGGGCGTTTCTTGGCTTGACTGTCGCGGTGGTTACTAAGACTTTGACGTTTGCTGCTGCTTTTAATGCTTTCACCAGTGAGGTGATTTGGTTGATTGTCATTTCCTTCTTTTTCGCTCGTGGGTTTGTGAAAACTGGGTTGGGGGACCGAATTGCGACGTATTTTGTAAAATGGATGGGGAAGAGTACAATTGGTTTGTCTTATGGTTTGACGATTAGTGAGGCTTTGATTGCCCCTGCTATGCCGAGCACTACGGCCAGGGCTGGGGGTGTGTTTTTGCCTATTATTAAGTCTTTGTCGCTTGCTGCTGATAGTAAACCGAACCACCCATCGTCTAAAAAGATCGGTGCTTACCTTATTCAATCTCAGTTTCAGTGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGGTGCTGCTCAAAACTTGTTGTGCCTTAAATTGGCTGAGGAACTTGGTGTACAAATATCTAGCCCCTGGCTTACTTGGGCCAAGTTTGCTTGTGCGCCAGCAATCATTAGTCTCTTAGTAACTCCGGCGATTTTATACAAGCTGTTTCCTCCAGAAACCAAGGACACACCTGAGGCCCCAGCCATGGCTACAAGAAAATTGGAGGCTATGGGTCCTGTCACAAAAAACGAATGGGTCATGGTCGGTACCATGCTTATTGCAGTCTCTTTATGGATTGCTGGAGAGGCCCTTAAAATTCCTAGTGTTGTAGCTGCAATGATTGGTTTATCAATACTCCTTACACTTGGAGTCCTAAACTGGGATGACTGCTTATCCGAAAAGTCAGCCTGGGATACATTAGCTTGGTTCGCTGTCCTGGTGGGCATGGCTGGCCAATTGACAAGTCTTGGTCTTGTGGGCTGGATGTCAAATTGTGTGGCTGGTTTGCTTAAGTCTCTTTCTCTCAGCTGGCCTGCAGCATTTGCTATTCTTCAGGCATCTTACTTCTTCGTTCACTACCTCTTTGCTAGCCAAACCGGTCACGTTGGCGCTTTGTACTCGGCATTCCTTGCAATGCACTTGGCTGCCAAGGTACCGGGTGTGTTGGCAGCTTTGGCCTTAGCTTACAACACAAATCTCTTTGGCGCTCTGACTCATTACAGCAGTGGCCAAGCTGCTGTATACTATGGAGCGGGTTATGTTGAGCTACCAGATGTATTCAAAATCGGTTTCGTGATGGCCCTCATAAACGGTACTATCTGGACTGTGGTTGGATGTATTTGGTGGAAGATTCTGGGTCTATATTGA 1734 47.64 MESFALQSVSTTTSFSPHSPISRISLLHRSKPISHSLSSPTSLHFSRSISLFQSTPPISQSPLFTSRSSLFNPLFNPKLRRAFPMRTSASQSPDNQSLPPNPPPRQGAKPIPFLISIAIGLIVRFAVPKPVEVSAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVAVVTKTLTFAAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTIGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNHPSSKKIGAYLIQSQFQCAGNSSALFLTGAAQNLLCLKLAEELGVQISSPWLTWAKFACAPAIISLLVTPAILYKLFPPETKDTPEAPAMATRKLEAMGPVTKNEWVMVGTMLIAVSLWIAGEALKIPSVVAAMIGLSILLTLGVLNWDDCLSEKSAWDTLAWFAVLVGMAGQLTSLGLVGWMSNCVAGLLKSLSLSWPAAFAILQASYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVELPDVFKIGFVMALINGTIWTVVGCIWWKILGLY 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20682084 20685807 - ClCG10G009350.1 Cla10g00893 282552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g00893 577 PANTHER BNAA09G06780D PROTEIN 1 577 - -
Cla10g00893 577 MobiDBLite consensus disorder prediction 1 20 - -
Cla10g00893 577 Pfam Sodium:sulfate symporter transmembrane region 113 576 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cla10g00893 577 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 1 577 IPR030676 -
Cla10g00893 577 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 129 571 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00893 Cla-Chr10:20682084 Cla02g02252 Cla-Chr2:37611454 1.94E-143 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g00893 - K03319 csv:101213018 1055.82