Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01019 ATGGCTAATCGGAGCTCCGAACAAGTATCCGATGCCATTCCCGACATGTCGTCATCCGACACAATCGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTGTTGCACTGTCGGTGTCGGAGAGGAAACTGTCATGGCAAAAGCTCCGACGATTCGACTCGTTGGATTTAGAGTCACGTAAACTCCATGGTCATGATGATCATCATCATTCCTATGCCAAGGAGAAGAAATGGAGTGTAATCTTACACTTAGCATTCCAAAGCATCGGCATAGTTTACGGCGACATCGGAACGTCGCCGTTGTACGTGTTCTCGAGCACATTTCCAGATGGAATAAAGCACAACGACGATATTTTAGGGGCGTTGTCGTTGATCGTTTACACCATAACTTTGATTCCTGTAATCAAGTATGTGTTTATTGTTTTGAGAGCAAACGACAATGGAGAAGGGGGAACCTTTGCATTGTACTCATTGATATGTCGATATGCAAAAGTGGGATTGATTCCGAATGCGGAGATTGAGGATCGAGAAGTGTCGAATTATCAATTAAGTTTGCCGAATGAAAGAGAGAAGAGAGCTTCAAGGATTCAATCAAAGCTAGAGAAAAGCCATTTTGCAAAGGTGTTTCTTCTATTTGCAACTATGCTTGGGACTTCCATGGTCATTGGAGATGGTGTTCTCACTCCTTGTATCTCAGTGTTATCTGCTGTGGGAGGGATCAAGGAGGCTACCCCTGCAATGACAGAAGGTAAGATTGTCTGGGCATCAGTAGGCATATTGGTGTGCCTATTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATTATCCTCATTTGGTTTGCTTTCAATGCTGGAATTGGTATCTACAACTTCATAAAATATGACCCAACTGTCATTAAAGCCTTAAATCCAAACTACATTTTTCAATACTTCCAAAGGAACAAAAAGGATGCTTGGATTTCTCTTGGTGGCATTGTTCTTGCCATTACAGGGACCGAAGCCTTGTTCGCCGACGTCGGGCATTTCAGCGTCCGATCGATCCAGCTAAGCATGTCAGCAGTGACCTACCCAGCTCTAATATTTGCTTACATAGGCCAAGCTTCGTTTCTTCGCAAGCATGATGATCTAGTGTCGGACACATTCTACAAGTCAATTCCTGGAAGTTTGTATTGGCCAGTGTTTGTTGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATTTCAGGAACATTCTCAATAATTCAACAATCACTTTCACTTGGATGCTTCCCAAGAGTTAAAGTGGTTCATACATCAGCTAAGTATGAAGGGCAAGTTTATGTTCCTGAGATAAATTACCTTTTGATGTTGGCTTGTGTTGGTGTTACTTTGGGGTTCAAGAACACTACAAAGATTGGGAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCTTTCTTAGTACTCGTTATGGTTATGATATGGAAAACTCATATCCTTTTCATAATCGCTTACATTCTCATCATTGGTAGTGTGGAATTGGTGTATTTGAGTTCAGTCCTTTACAAGTTTGACCAAGGAGGCTATCTTCCTTTGGCTTTTGCAGCTGCTTTGATGACAATCATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTATGAGCTCAATAACAAAATCTCTACAGAAAAGCTCAATGGGATGGTGAATGCCACCAACTTTAGAAGAATTCCAGGCATTGCATTCTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCATTACGTCGACCACATTCCTGCACTGCATTCTGTGCTCGTCTTCATCACCATTAAATCGCTTCCTGTGAGCAAGGTTCCGGCAGATGAACGTTTTCTCTTCCGACAAGTAGAGGCGAAGGAGATCGACGTGTTTCGTTGTGTTGTTCGATACGGGTACACGGATGTGCAGACAGAACAAGAATCGTTTGAGAAGATATTGATTGAAAGATTGGAAGAGTTCGAGAGAGAACGACGTAGATTGGTTAAAGGGGCAAATAAAGTTGAAAATGAGAATGAGGATGAGAAAGGATTTGGAGGAATTGGAGAAGCATGGAAGGATGGAGTTGTTCATTTAGTTGGTGAAAGTGAAGTGGTTGCTAAAAAAGGGGCAAGCTTTGGGCAGAGAATGATGATAAACTATGCATATAGCTTCTTGAAGAGGAATTTGAGGCAAACCGATCAAGTATTTGATATTCCTCGCAAGCATATGCTCAAAGTAGGAATGACTTGTGAACTTTAG 2307 41.79 MANRSSEQVSDAIPDMSSSDTIVKEEEEEEEEEVVALSVSERKLSWQKLRRFDSLDLESRKLHGHDDHHHSYAKEKKWSVILHLAFQSIGIVYGDIGTSPLYVFSSTFPDGIKHNDDILGALSLIVYTITLIPVIKYVFIVLRANDNGEGGTFALYSLICRYAKVGLIPNAEIEDREVSNYQLSLPNEREKRASRIQSKLEKSHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPAMTEGKIVWASVGILVCLFMVQRFGTDKVGYTFAPIILIWFAFNAGIGIYNFIKYDPTVIKALNPNYIFQYFQRNKKDAWISLGGIVLAITGTEALFADVGHFSVRSIQLSMSAVTYPALIFAYIGQASFLRKHDDLVSDTFYKSIPGSLYWPVFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLVMVMIWKTHILFIIAYILIIGSVELVYLSSVLYKFDQGGYLPLAFAAALMTIMYVWNSVFRKKYFYELNNKISTEKLNGMVNATNFRRIPGIAFFYSELVQGIPPIFKHYVDHIPALHSVLVFITIKSLPVSKVPADERFLFRQVEAKEIDVFRCVVRYGYTDVQTEQESFEKILIERLEEFERERRRLVKGANKVENENEDEKGFGGIGEAWKDGVVHLVGESEVVAKKGASFGQRMMINYAYSFLKRNLRQTDQVFDIPRKHMLKVGMTCEL 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23590456 23596279 + ClCG10G010690.1 Cla10g01019 282678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01019 768 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 36 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla10g01019 768 MobiDBLite consensus disorder prediction 1 31 - -
Cla10g01019 768 Coils Coil 673 693 - -
Cla10g01019 768 PANTHER POTASSIUM TRANSPORTER 36 767 - -
Cla10g01019 768 MobiDBLite consensus disorder prediction 1 17 - -
Cla10g01019 768 Pfam K+ potassium transporter 85 657 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla10g01019 768 TIGRFAM kup: potassium uptake protein 84 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01149 Cla-Chr7:28423171 Cla10g01019 Cla-Chr10:23590456 1.50E-16 dispersed
Cla09g00571 Cla-Chr9:5257188 Cla10g01019 Cla-Chr10:23590456 7.67E-109 dispersed
Cla10g01019 Cla-Chr10:23590456 Cla11g00037 Cla-Chr11:492278 0 dispersed
Cla10g01019 Cla-Chr10:23590456 Cla09g01844 Cla-Chr9:36099892 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01019 K03549 - csv:101215797 1281.54