Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01048 ATGATCAAAGCTATCATGCAGAAGGTTGACTTACCAGCATTTGACGAGAGAGATCCCAGAGGATGGAGTTTTTTCAAAAGTGGAGCAGTGTTTCTAGATGAATCGTCTACTGCAGTAGAAGTTAGAGCTTTGATTAAAATGGCATCATTTGCTAAAGAAAATGTAGAAAGTGGACAAGCAATTTCTAGTATTATTGGGACGGGAAAATGTGAAAGCTACGTCATTTTTAGTAATGAAACTTCCCTTGGGGATGCATTTCGGATATTCCTATACTTTATGGGCCTTGCATATTGTTTCGTTGGATTATCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCGCACACCAATACTGAAATTATTCGATATGAGAAGGTCTGGAACTTTACAATTGCAGATATCAGCTTACTGGCGTTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGAATTTCTGACTTTTTGCGGAGGATTAGATCCAGTAATGGGGTCAATGGTTAACCGATATTGCACAACATCATTTAGCTATTGCAATTCTTTTCCTGACAGTTTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTTCCCATTCATGCGGTTTGCGTTGTAGTGCCTAAAGCAGGGGAGTTGAAAAAAATATCTGATATAGGAGTTTGGCTAGTTGAGCTCGCTTGGTCTTTCTGGGCTTATATTTGGCTATACATTATTTTGGAGGTGTGGACACCAAATGTAATAACTCTTTGGGAAGCTTTGTTGACTGTGCTACAGTATGCATTACTGCTTACACATGCTTACGCTCAAGATAAGCAATGGCCCTACTTGTCCTTTCCTTTGGCAAGAACTGAGAGGCCAGAGGAATGGGTGCCACCTGAGATTGCTATATGCCCACAGGATAATCCCTGTAGAGACGAATTTCAAGCCCATGAGAATGAGCAGAGAACCATTGTTGACATTTTCTCTATCCATGATAAAGATGAGAAAGGTAATGTGTATCATGAAGTTCCTGGACATGATGTTGCTGAATCCTCCTGTAGTAATTTTCCAGAGGAGATGGATGGAAAGGCAGACCACCCTCATGTGCTTAAAATTTGGAAACAACAGTTTGTGGATGCACTTTCGTTGGGAACTTCGGAATCAAAGAAGCTGAAAAACATTTATTTACGACTCGCAAGATTATGCTTTCAGTTGCTTCTTTTTCCATGGAGACTTTTGTTTGCTTTTGTACCTCCTTATCACATTGCTCATGGATGGCTTGCCTTTATTTGCTCCCTTATTTTCATCAGTGCGATAGCTTATGTCGTCACTAAGCTCACAGATTTAATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCAAGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCTGCCGAGCGCCAGACAACGGCAGACTCTGCCATTGCAAACATTACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATAAGCACAACATACAATTTCATAGCGTATAGAGAACCACTAAAGATAAAGGATGCAGCAGGTCTGAGCTTCAGTTTGCTGGTGTTTTTTTCAACTTCAGTGGCTTGCATTGCTGTGCTTGTGTTTAGGCGTCTAACATTAGGTGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGGTTACATGTTTCTTTTTCATGTTGCTTTGGCTCATCTTTGTGGTGCTCTCTTCTCTCAAGGTTTCAGATATCATCTGA 1857 41.36 MIKAIMQKVDLPAFDERDPRGWSFFKSGAVFLDESSTAVEVRALIKMASFAKENVESGQAISSIIGTGKCESYVIFSNETSLGDAFRIFLYFMGLAYCFVGLSAITARFFRSMENVVKHSRKVVEIDPHTNTEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGEFLTFCGGLDPVMGSMVNRYCTTSFSYCNSFPDSLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELAWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYALLLTHAYAQDKQWPYLSFPLARTERPEEWVPPEIAICPQDNPCRDEFQAHENEQRTIVDIFSIHDKDEKGNVYHEVPGHDVAESSCSNFPEEMDGKADHPHVLKIWKQQFVDALSLGTSESKKLKNIYLRLARLCFQLLLFPWRLLFAFVPPYHIAHGWLAFICSLIFISAIAYVVTKLTDLISCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISTTYNFIAYREPLKIKDAAGLSFSLLVFFSTSVACIAVLVFRRLTLGAELGGPRLWAWVTCFFFMLLWLIFVVLSSLKVSDII 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24346572 24352400 + ClCG10G010970.1 Cla10g01048 282707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01048 618 Gene3D - 402 612 IPR044880 -
Cla10g01048 618 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 394 618 - -
Cla10g01048 618 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 211 303 - -
Cla10g01048 618 PANTHER SODIUM/CALCIUM EXCHANGER 394 618 - -
Cla10g01048 618 PANTHER SODIUM/CALCIUM EXCHANGER 211 303 - -
Cla10g01048 618 PANTHER SODIUM/CALCIUM EXCHANGER 43 178 - -
Cla10g01048 618 Gene3D - 143 307 IPR044880 -
Cla10g01048 618 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 43 178 - -
Cla10g01048 618 Pfam Sodium/calcium exchanger protein 91 296 IPR004837 GO:0016021|GO:0055085
Cla10g01048 618 Pfam Sodium/calcium exchanger protein 446 610 IPR004837 GO:0016021|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01048 K03452 - csv:101205540 967.222