Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01096 ATGTCGGTGCCTGCGGCTTCCGTCACCGCAGGTATATTGGAACAGGTCTCTTACCGGTTTCCAAAACATTTGATTTTATTGTGGTTTGTGATTTCCGTAACCAATGCCGATGTCCCCGACGTACCACCAGCACCTTTGGTTGCACCTACTACTCGCAATATGCCTCTACCTGCAAAATTGCCTCTTCACCAACACCATCACCGAAAATATATGTCACCACAAAGTGTGCCAGAAGCTGGACTACCGCCGTCATCTCCTCCTTACTATGGGCATCTTATCACTTCTGGTCACCCACCCACAAGTTCAAATTTTTCCAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTATTGCAGCAGACTGTTGCAAACCTGACATGGTGTTAAAACGAGGAAGTGGTGATGACTGCCATTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAACGTATCACAGAATCCTAACTGGAAACTCTTTCTCGAAGAGTTAGCTTCTGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCGAGATTAAATATCTCAATGGACATTACTCCCCACGCTGGGATCAGCTTTTCTGCAGTCGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAAGTTCGTCTGGACCCTACGCTGGTTGGCGATTACCATCTTCTCAATATTACCTGGTTTAAGCCTCCACCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCTGTAGCAGCTCCAGCATACCATTTTCCAGCCTCAACATCACTGAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTATTCTTGGTATTGGCGCTGGTTTTTTGTTTGTTGCCATTCTTTTTGTGTTGATAATTTGCTTATGTACATCTCATCGTGGGAAGACTGAAGCACCTCCATTAGTAACTGAAAAACGAAGGGTTGAGGACAAAGTGCCTGTGGCAGGAGCAGGATCTTTCCCTCATCCATCAAGTATGAGATTTCTAACTTATGAAGAACTTAAAGAAGCAACTAATAACTTTGAAGCAGCCAGCATATTGGGGGAGGGCGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGTGACAAGGAATTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTACATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGTGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCACGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCTGCCCGAGGGCTTGCTTACCTTCACGAGGACTCACAACCTTGTGTGATACACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCCGACTTCGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGATACGTCGCTCCTGAGTATGCAATGACGGGCCATCTACTTGTTAAAAGTGATGTTTATAGCTACGGAGTTGTACTTCTTGAGTTGCTCACCGGAAGGAAACCTGTAGATATGTCACAACCATCGGGACAAGAGAACCTGGTCACATGGGCGAGGCCGATTTTGAGAGACAAGGACCGGTTAGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCAAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTCGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTACAGCGCGTTACAGAATACCAAGACTCCATGGTACCATCCTCCAACAACCGAACCAATCTAAGACAGTCGTCCACAACTTTCGAGTCTGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGTGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2178 45.64 MSVPAASVTAGILEQVSYRFPKHLILLWFVISVTNADVPDVPPAPLVAPTTRNMPLPAKLPLHQHHHRKYMSPQSVPEAGLPPSSPPYYGHLITSGHPPTSSNFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPIAADCCKPDMVLKRGSGDDCHCVYPIKIDLLLLNVSQNPNWKLFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVRLDPTLVGDYHLLNITWFKPPPPSEAPLASASPVAAPAYHFPASTSLSSPSKGHHSNLTLILGIGAGFLFVAILFVLIICLCTSHRGKTEAPPLVTEKRRVEDKVPVAGAGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSSNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25170630 25176095 - ClCG10G011500.1 Cla10g01096 282755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01096 725 ProSiteProfiles Protein kinase domain profile. 381 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01096 725 SUPERFAMILY Protein kinase-like (PK-like) 360 658 IPR011009 -
Cla10g01096 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Cla10g01096 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Cla10g01096 725 CDD STKc_IRAK 387 657 - -
Cla10g01096 725 Gene3D Transferase(Phosphotransferase) domain 1 459 681 - -
Cla10g01096 725 Gene3D Phosphorylase Kinase; domain 1 362 458 - -
Cla10g01096 725 MobiDBLite consensus disorder prediction 666 707 - -
Cla10g01096 725 PANTHER OS01G0750732 PROTEIN 22 725 - -
Cla10g01096 725 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 22 725 - -
Cla10g01096 725 Pfam Protein kinase domain 382 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00254 Cla-Chr7:2802426 Cla10g01096 Cla-Chr10:25170630 4.03E-107 dispersed
Cla09g00062 Cla-Chr9:598165 Cla10g01096 Cla-Chr10:25170630 5.32E-123 dispersed
Cla09g00431 Cla-Chr9:4111706 Cla10g01096 Cla-Chr10:25170630 1.41E-91 dispersed
Cla10g01096 Cla-Chr10:25170630 Cla05g00626 Cla-Chr5:5770602 2.56E-101 dispersed
Cla10g01096 Cla-Chr10:25170630 Cla03g01496 Cla-Chr3:30528622 8.46E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80855 PF00069 Pkinase 6.10E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01096 - - csv:101219278 1330.47