Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01121 | ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGCTGTTCCTTTGAATGCACCGACCGAGCTCTCATCCTTGGTTCGCAGCAATGGTAGAGTCTCAATGAGAAGATCTGGAAAGCCAGCGGCTTCCTCAGGCAGCCCATGGTATGGTCCGGACCGTGTCAAGTACCTTGGACCATTCTCTGGTGAGCCTCCATCTTACCTCACAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGTCTATCTGCCGATCCTGAGACCTTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATACATGCACAGAGTATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGATCCCCTCGGACTGGCTGATGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTTGTACAAGCCATTGTAACAGGAAAGGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA | 798 | 49.0 | MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 25634840 | 25635637 | - | ClCG10G011800.1 | Cla10g01121 | 282780 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01121 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 258 | - | - | |
Cla10g01121 | 265 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC | 2 | 265 | - | - | |
Cla10g01121 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 262 | - | - | |
Cla10g01121 | 265 | Pfam | Chlorophyll A-B binding protein | 65 | 231 | IPR022796 | - | |
Cla10g01121 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 2 | 265 | IPR001344 | GO:0009765|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00280 | Cla-Chr2:2756166 | Cla10g01121 | Cla-Chr10:25634840 | 1.55E-151 | dispersed | |
Cla02g01804 | Cla-Chr2:33078485 | Cla10g01121 | Cla-Chr10:25634840 | 5.66E-171 | dispersed | |
Cla03g00652 | Cla-Chr3:7885643 | Cla10g01121 | Cla-Chr10:25634840 | 8.85E-81 | dispersed | |
Cla08g00194 | Cla-Chr8:3955913 | Cla10g01121 | Cla-Chr10:25634840 | 2.14E-66 | dispersed | |
Cla10g00607 | Cla-Chr10:9031527 | Cla10g01121 | Cla-Chr10:25634840 | 5.09E-119 | dispersed | |
Cla10g01121 | Cla-Chr10:25634840 | Cla11g01861 | Cla-Chr11:32115231 | 2.65E-59 | dispersed | |
Cla10g01121 | Cla-Chr10:25634840 | Cla01g02379 | Cla-Chr1:37491657 | 2.17E-173 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01121 | K08912 | - | csv:101203342 | 528.865 |