Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01130 ATGTCTCGCCAAGTTCCGACCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTAGGAGATGAGATCGGAAAAGGAGCATATGGACGAGTCTACAAGGGTCTGGACTTGGAGAATGGGGACTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGACCCAGCAATATCATACCTTTGGTTCTAAAATTATTGCTCAATTCCTCTCCAATGGGCTTAAGCATGTCTTGCCACTCACTAAGAACTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTTTGAAAACAAAGACTCACCTTCACATAATACTCGAGTATGTGGAGAATGGATCGCTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCGTTGGTTGCTGTTTATATCTCTCAGGGCCTTGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCCGATGTTAATACTCATTCAGTTGTTGGAACACCTTACTGGATGGCACCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCTGACATATGGAGTGTTGGATGTACTGTGATTGAACTACTTACATGCGTACCTCCGTATTATGATCTACAGCCTATGCCCGCTCTCTTTCGCATTGTACAGGACAAGCATCCTCCAATTCCAGATAGCCTATCACCAGATATCACTGATTTTTTACGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCGGATGCAAAAACTTTGCTTTCTCATCCTTGGATACAGAACTGTCGACGGGCTTTACATTCTTCTCTTCGTCATAGTGGCACATTAAGAAACACTCAACAAGATGGATCAATTGAAGCAGAAATTTCTAATGGAGACAATCAAAACTCTTGCGAAAGCCCTTCGGCAGAGAAAAATGAAGTCACTGATTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGTCATCAGATGATGCCACTGATGCGAGCAAGTCCCAAAAGCATTTTGCTTCAGGCCCTAATTTTGTTGAGGAAGGAGAAAGTCTAGAAGAAGATACCCTATTGGATCAGGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACTGGTTCTGGCAGACTTACTACCTCTGAGCCGACTGAGTTTCATGAATCTCATGGTAGAGGCCATGATGAAGTGATAGTGAATGGTGAAGTGCCATTGGCAGAATTAAGGAAAGATGCTCCTAGAAAACATGGAGAGAAAGAAACTTCTACAACATCTGGAAGTAGATCATTTGGTTTTGAACCTGAAAGTCAGGACAATAGTTTTCAAAAGGTGTCAAAGATGTCAATTGCTTTGGGAGGAGATGAGCTGAGTAAATTTAGTGACACTCCTGGAGATGCTTCCTTGGATGATTTATTCCAACCTCTAGATAAGCACCCCGGGGATCAAGCTGCTGGAGCATCAACATCTCTATCTACTCTACAATCAAACATGGGTAATGTGCCAGTAAATGATGTTGGGAAAAATGACCTGGCCACAAAATTGAGGGCTACGATTGCTCAAAAACAAATGGAAAATGAAATGGGACAGGCAAGTGGTGGGGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAAGGATGATGATATTGATATTGATGGTTTGGTTTTTGATGAGAAGTTGCCCGGAGAAAACCTTTTCCCTTTGCAGGCTGTTGAATTCGGCAGATTAGTTGGGTCATTGAGACCTGATGAACCCGAAGATGTAATTGTATCTGCCTGTCAAAAACTGATTGCTATCTTTCATCAAAGACCGGAGCAGAAAATTGTATATGTTACACAGCATGGTCTACTCCCGTTAACTGAGTTGCTTGAAGTTCCTAAAACTCGTATTATATGTTCAGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAATGTTGACTTCCAAGAAAATGCCTGTCTTGTTGGTCTAATTCCTCTGGTAATGGGGTTTGCAGTTCCTGATCGTCCCCGAGAAGTCCGTATGGAAGCAGCTTATTTCTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACGTTGCAAATGTTCGTCGCGTGCCGTGGAATACCTGTATTAGTAAGCTTTTTAGAGGCTGACTATGCAAAGTACAGGGACATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTAGAAATGGTTTCTGTCGTATAGCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACGCTCTACAGCTTAAATGAGGCAACTCGCTTAGCTTCCATCACAGTTGGGGCGGGATATCCAGTTGATGGTTTAACTCAACGGCCACGATCAGGTCAACTAGATCCTAGCCACCCTATATTCAGTCAGTATGAGGCCTCATTTCCTATGCCTGATCAACCTGATCTTTTGAAGGTCAAACATGGAATAGTTGATCATCACCCGTCTTCTGGACCACCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATGCCAATCAATCTGAGAACCGACGCTTTTCCATAGATGCTGATAGGCCTCAATCTAGTAATGCCACAAATGAAGCCTTGGGATCTAAACCATCAGAGCTTGCATCTTTGGATAAGGTTTTACATTTAGCAAGCAAGGAATCGTCTGGCTTGGCTTCTAAAGAACATGAAAATGTAGATAGATGGAGAACTGAGCGAATGACGAACTCTAATAGGACTTCCACAGATAGGCCTCCAAAATTGGTGGAACCTGCATCTAATGGATTTCCTACAACATTGGCAGCTACTCAACAAGAGCAAGTTCGGCCCCTTCTAAGTCTGTTGGACAAAGAACCCCCGTCTCGACATTTTTCCGGTCAGCTTGAGTACATGCGCCAACTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCAAATGAAAAGAAGATAAATGGGGAGCATGATTTCTTAATGGCAGAATTCGCTGAGGTTTCTCAACGTGGAAAAGACAATGGAAATGTTGACCCCACTTCTAAGATTTCTCTTAAAACGGTGGCAAAGAAGGTAGGGCCCCTGATTTCCAATGAGGGAGCTGCATCCACATCTGGAATTGCTTCACAGACAGCATCCGGGGTACTTTCAGGTTCGGGCGTATTAAATGCTAGACCAGGGAGTGCAACATCCTCTGGACTTCTTTCGCACATGGTTTCAACTCTGAATGCTGATGTTGCAAGGGAATATCTGGCTAAGGTGGCTGATCTATTGCTCGAGTTTGCTCAAGCAGATACAACTGTGAAGTCATATATGTGCAGCCAAAGCTTGCTTAATCGCCTTTTCCAGATGTTCAATAGGGTAGAGCCCCCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACGGATCCAAATTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATTCCGAACCTTGAACTCAAAGAAGGGTCGTTGGTGTCGCAAATACATACTGAGCTGCAGCCCTCTATCTTCAATTCTTTGATGAAGTCTTGCTGGTTCTTGGATTCTTGGAGGAATTTCTTGGACCCTCAGGCAAATCTTGATTCCTTGAAGCATTTGTTGTTGGTCCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGGAGACAAGAATATGCAGCTGAAAATGGAATTATTCCACACTTGATGCATTTTATTATTTCAGACTCTCCTCTGAAACAATATGCATTGCCTCTACTGTGTGATATGGCCCATGCATCTCGTAATTCCAGGGAGCAGTTAAGAGCCCACGGTGGATTAGATGTGTATTTGAGCCTACTTGAGGATGACCTTTGGTCTGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCATGATAATGACAACCGAAAAGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAATTGGTGAAGTTTTTCCAGTGCTGTCCAGAACAACATTTTGTCCATATATTGGAGCCTTTCTTGAAAATCATCACGAAATCTTCCCGAATCAATACGACATTGGCTGTCAACGGATTGACCCCGTTGCTTATAGCAAGGCTGGACCACCAGGATGCGATTGCTCGGCTTAATCTACTTAAACTGATAAAGGCTGTGTATGAGCATCATCCACGACCAAAGCAGTTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATCGAGGAACGCAGGGATGGACAACGGTCTGGAGGGCAAGTGTTGGTGAAACAAATGGCCACATCTCTGCTTAAAGCTCTTCATATAAATACTGTTTTGTAA 4359 42.37 MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMTQQYHTFGSKIIAQFLSNGLKHVLPLTKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLRNTQQDGSIEAEISNGDNQNSCESPSAEKNEVTDSDFKADSRKELSSDDATDASKSQKHFASGPNFVEEGESLEEDTLLDQVPTLSIHENSSLLTGSGRLTTSEPTEFHESHGRGHDEVIVNGEVPLAELRKDAPRKHGEKETSTTSGSRSFGFEPESQDNSFQKVSKMSIALGGDELSKFSDTPGDASLDDLFQPLDKHPGDQAAGASTSLSTLQSNMGNVPVNDVGKNDLATKLRATIAQKQMENEMGQASGGGDLLRLVMGVLKDDDIDIDGLVFDEKLPGENLFPLQAVEFGRLVGSLRPDEPEDVIVSACQKLIAIFHQRPEQKIVYVTQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNVDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYRDMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGYPVDGLTQRPRSGQLDPSHPIFSQYEASFPMPDQPDLLKVKHGIVDHHPSSGPPEPSRASTSHSQRSDANQSENRRFSIDADRPQSSNATNEALGSKPSELASLDKVLHLASKESSGLASKEHENVDRWRTERMTNSNRTSTDRPPKLVEPASNGFPTTLAATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRQLSGLERHETIMPLLHASNEKKINGEHDFLMAEFAEVSQRGKDNGNVDPTSKISLKTVAKKVGPLISNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVAREYLAKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTELQPSIFNSLMKSCWFLDSWRNFLDPQANLDSLKHLLLVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDDLWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25779495 25804539 + ClCG10G011890.1 Cla10g01130 282789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01130 1452 MobiDBLite consensus disorder prediction 429 447 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 281 312 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 313 339 - -
Cla10g01130 1452 SUPERFAMILY Protein kinase-like (PK-like) 10 279 IPR011009 -
Cla10g01130 1452 PANTHER MAP KINASE KINASE KINASE 2 149 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 825 879 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 893 930 - -
Cla10g01130 1452 Pfam Protein kinase domain 148 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01130 1452 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 149 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 835 849 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 389 403 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 897 915 - -
Cla10g01130 1452 SUPERFAMILY ARM repeat 581 775 IPR016024 -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 373 388 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 373 447 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 413 428 - -
Cla10g01130 1452 SMART arm_5 609 649 IPR000225 GO:0005515
Cla10g01130 1452 SMART arm_5 694 737 IPR000225 GO:0005515
Cla10g01130 1452 SMART arm_5 1232 1271 IPR000225 GO:0005515
Cla10g01130 1452 SUPERFAMILY ARM repeat 1074 1426 IPR016024 -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 462 495 - -
Cla10g01130 1452 Gene3D Transferase(Phosphotransferase) domain 1 17 147 - -
Cla10g01130 1452 Gene3D Transferase(Phosphotransferase) domain 1 148 307 - -
Cla10g01130 1452 Pfam Protein tyrosine and serine/threonine kinase 22 132 IPR001245 GO:0004672|GO:0006468
Cla10g01130 1452 Gene3D - 1066 1447 IPR011989 -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 281 348 - -
Cla10g01130 1452 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 149 1407 - -
Cla10g01130 1452 CDD STKc_Cdc7_like 19 267 - -
Cla10g01130 1452 PANTHER MAP KINASE KINASE KINASE 149 1407 - -
Cla10g01130 1452 MobiDBLite consensus disorder prediction 862 878 - -
Cla10g01130 1452 ProSiteProfiles Protein kinase domain profile. 20 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01130 1452 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Cla10g01130 1452 Gene3D - 574 778 IPR011989 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01130 Cla-Chr10:25779495 Cla06g00558 Cla-Chr6:6766067 1.23E-50 dispersed
Cla10g01130 Cla-Chr10:25779495 Cla01g00446 Cla-Chr1:4840377 6.20E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80858 PF00069 Pkinase 1.20E-26 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01130 - - csv:101206469 2593.15