Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01144 ATGTTGAGCTCCGGCAACCTCACCGTCATCTCCTCCAGTGAATTCCCGTCTCAGAGATTGCTTGTACGGCAGCTCTTCTTACCTGACATCCAAATTTTAGAGATCTTCATTGCAATTTCTGTTTTTACAGCAATAAAATCATTGAGACAAAGTAGGAAACAGGGGTTACCTGTATGGCCGATCGTCGGAATGTTACCGTCTTTAGTCATGGGACTTCGAAGCAACTTGTATGAATGGATCACCGAAGTTCTGTACCATCAAAATGGAACTTTCAGATTCAAAGGACCATGGTTTAGTAGCTTGAATTGTGTTGTAACTTCAGATCCTCGTAACATTGAGCACATTCTGAAAACAGAGTTTCCCAACTATCCAAAAGGCTCCTTCTTCCGTGAAACAGTCCGTGACCTTCTTGGCGACGGAATCTTCAACGCTGACGGCGAGGTTTGGCACCAGCAGAGGAAGACAGCCAGCATCGAGTTCCATTCAACAAAGTTCCGGCAACTCACCGTGGAGTCTCTTCACGAGTTAGTCCACTCTCGGCTCCTCCCTGCTTTACACAGGCATTTCGTCGAACAGTTGGTGCCCATTGATCTCCAAGACATTCTTCTCCGCCTAACTTTCGACAATGTCTGTATGATCGCATTCGGCGTCGATCCCGGCTGTTCGAGCCCTAATTTACCAGCGATTCCTTTCGCCAATGCCTTCGAGGTGGCAACGGAAGCCACCGTCCTTCGATTCGTAACTCCGAAATTCATATGGAAAACGATGAGGCATTTCAATTTAGGAACAGAAAAGAGACTCAAATTTGCCCTAAAAGAGGTCAATCAATTCGCGAAGAACGTAATTGAAAAGAGAAAAATAGAGAATGGCAATGAAATCAAGAGATCCGACCTGCTATCGGTGTTTATGGGACTGAAGGACGAGAACGGGGAGCCATATTCGGAGAATTTCTTGAAAGATATATGCGTGAATTTTATACTTGCCGGGAGAGATACCTCGTCGGTGGCGTTAAGTTGGTTCTTTTGGCTGATTGATCGGAATCCGGAAGTGGAAGAGAGGATTCTGGCGGAGATCTGCCGGATATTGGAGAAGAGAGGAGAGGCGGCGGCGGTGGAATCGTCGGGCGGCGATGTGGCGTTTGAAGTAGAGGAGATAAAGAAGATGGAATATTTGCAGGCTGCTCTTTCTGAAGCTTTGAGATTGTTCCCTTCGGTGCCTGTTGATCACAAGGAGGCCATTAAAGATGATGTATTACCAGATGGAACAAAGCTAAAGAAAGGAACAAAAGTGATCTATGCAATATATGCAATGGGCAGAACAGAGGCAATATGGGGAAAAGATTGCAACGAGTTCAAGCCGGAGAGATGGTTAAGAGATGGTCGATTTATGGCCGAGTCAGCATATCGGTTCACGGCCTTCAACGGCGGGCCTCGACTATGCTTGGGAAAGGATTTTGCATATTACCAAATGAAGTATACCGCGGCCTCCATCATCCTCCGCTACCGTGTTAGGGTGGCGGAGAAGCACCCTGTGGTGCCAAAGCTTGCTCTGACAATCTACATGAAATATGGGTTGAAGGTGAATATGTTTAAACGTGACAAGGAAGAGCTTCAAAAATATTTCAAAAGTAAATAA 1635 45.99 MLSSGNLTVISSSEFPSQRLLVRQLFLPDIQILEIFIAISVFTAIKSLRQSRKQGLPVWPIVGMLPSLVMGLRSNLYEWITEVLYHQNGTFRFKGPWFSSLNCVVTSDPRNIEHILKTEFPNYPKGSFFRETVRDLLGDGIFNADGEVWHQQRKTASIEFHSTKFRQLTVESLHELVHSRLLPALHRHFVEQLVPIDLQDILLRLTFDNVCMIAFGVDPGCSSPNLPAIPFANAFEVATEATVLRFVTPKFIWKTMRHFNLGTEKRLKFALKEVNQFAKNVIEKRKIENGNEIKRSDLLSVFMGLKDENGEPYSENFLKDICVNFILAGRDTSSVALSWFFWLIDRNPEVEERILAEICRILEKRGEAAAVESSGGDVAFEVEEIKKMEYLQAALSEALRLFPSVPVDHKEAIKDDVLPDGTKLKKGTKVIYAIYAMGRTEAIWGKDCNEFKPERWLRDGRFMAESAYRFTAFNGGPRLCLGKDFAYYQMKYTAASIILRYRVRVAEKHPVVPKLALTIYMKYGLKVNMFKRDKEELQKYFKSK 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25950852 25953299 - ClCG10G012020.1 Cla10g01144 282803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01144 544 Gene3D Cytochrome P450 52 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Cla10g01144 544 PANTHER CYTOCHROME P450 20 532 - -
Cla10g01144 544 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 Pfam Cytochrome P450 56 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PANTHER CYTOCHROME P450 86B1-LIKE 20 532 - -
Cla10g01144 544 SUPERFAMILY Cytochrome P450 55 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01144 544 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01144 Cla-Chr10:25950852 Cla10g01565 Cla-Chr10:31060071 2.55E-129 dispersed
Cla11g00884 Cla-Chr11:14972065 Cla10g01144 Cla-Chr10:25950852 2.09E-107 dispersed
Cla10g01144 Cla-Chr10:25950852 Cla09g00419 Cla-Chr9:3995408 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01144 K15402 - pvy:116130799 780.015