Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01206 | ATGAATAAGGGTCTTCAGCTGGTTTCCAAAGGAAATGATCCGCCATTTGTATTTCCTCAAAAACCTCCTTCGTCTTCTTCTTCTTCACACCCAACACCACTTGATTTTTCCCTCTCTTTTTCCTCCATTCTTCAACCTCCTCATGAACATCAAACCCACAATCACAAACACCATAACCACCTCCTTCCCCATTCTCTCAACTCTCCTCCGCCGCCCGCCGCCACTTCTCGCCGATCTTCTCAAACTGAAGGATCAGAAGGAGCAGGTGTTTTTACGGAGGTGATAAGTGGAGCGGCTGCGGCGGCGGATGGCGAGGGAGGAGAATTCGGAAGAGGTAACGGAATAGTTTTGTCAACATACAGAAACAGAAATGAAAGGGAAGAAAAAAGAGAGAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGAAATTGGGTTGCAGAAAAAAACTGAGGCTTTCAAGACAGCAATCGGCTTTTCTTGAAGAAAGCTTCAAACAACACCATACACTTTACCCTAAGCAAAAGCTAGAAGTTGCAAGAAGACTGAATCTTCTTCCTCGTCAAGTAGAAGTTTGGTTTCAAAATAGACGAGCAAGAACGAAGCTGAAGCAAACAGAAGTAGAGTGTGAATACTTGAAGAAATGTTGCGCAACATTGACCCAACAAAACACAAAGCTTCAAAAGGAACTTCAAGATTTGAGAGCTTTAAAAACCACCCATTCTCTCTTCATGCACTCCCCCGCCACCACTCTCACCTTGTGCGCGTCTTGTGAACGCGCCGCCGCAACCCCCAACTTCCGTTGA | 819 | 44.81 | MNKGLQLVSKGNDPPFVFPQKPPSSSSSSHPTPLDFSLSFSSILQPPHEHQTHNHKHHNHLLPHSLNSPPPPAATSRRSSQTEGSEGAGVFTEVISGAAAAADGEGGEFGRGNGIVLSTYRNRNEREEKRENEEEEEEEEEEEEEEMKLGCRKKLRLSRQQSAFLEESFKQHHTLYPKQKLEVARRLNLLPRQVEVWFQNRRARTKLKQTEVECEYLKKCCATLTQQNTKLQKELQDLRALKTTHSLFMHSPATTLTLCASCERAAATPNFR | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26697926 | 26701397 | - | ClCG10G012670.2 | Cla10g01206 | 282865 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01206 | 272 | ProSiteProfiles | 'Homeobox' domain profile. | 148 | 208 | IPR001356 | GO:0003677 | |
Cla10g01206 | 272 | PANTHER | - | 118 | 268 | - | - | |
Cla10g01206 | 272 | SUPERFAMILY | Homeodomain-like | 150 | 217 | IPR009057 | - | |
Cla10g01206 | 272 | ProSitePatterns | 'Homeobox' domain signature. | 183 | 206 | IPR017970 | GO:0000981|GO:0006355 | |
Cla10g01206 | 272 | MobiDBLite | consensus disorder prediction | 71 | 87 | - | - | |
Cla10g01206 | 272 | PANTHER | HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN | 118 | 268 | - | - | |
Cla10g01206 | 272 | Gene3D | - | 156 | 206 | - | - | |
Cla10g01206 | 272 | SMART | halz | 208 | 251 | IPR003106 | GO:0006355|GO:0043565 | |
Cla10g01206 | 272 | Pfam | Homeobox associated leucine zipper | 208 | 242 | IPR003106 | GO:0006355|GO:0043565 | |
Cla10g01206 | 272 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Cla10g01206 | 272 | MobiDBLite | consensus disorder prediction | 22 | 48 | - | - | |
Cla10g01206 | 272 | MobiDBLite | consensus disorder prediction | 131 | 145 | - | - | |
Cla10g01206 | 272 | SMART | HOX_1 | 150 | 212 | IPR001356 | GO:0003677 | |
Cla10g01206 | 272 | Pfam | Homeodomain | 152 | 206 | IPR001356 | GO:0003677 | |
Cla10g01206 | 272 | CDD | homeodomain | 152 | 209 | IPR001356 | GO:0003677 | |
Cla10g01206 | 272 | MobiDBLite | consensus disorder prediction | 123 | 145 | - | - | |
Cla10g01206 | 272 | Coils | Coil | 221 | 241 | - | - | |
Cla10g01206 | 272 | Coils | Coil | 117 | 152 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g00795 | Cla-Chr10:17043236 | Cla10g01206 | Cla-Chr10:26697926 | 2.60E-51 | dispersed | |
Cla10g01206 | Cla-Chr10:26697926 | Cla10g01677 | Cla-Chr10:32506524 | 3.36E-56 | dispersed | |
Cla10g01206 | Cla-Chr10:26697926 | Cla09g00345 | Cla-Chr9:3389307 | 2.24E-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61884 | PF00046 | Homeodomain | 1.00E-13 | CL0123 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01206 | K09338 | - | csv:101208907 | 272.322 |