Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01223 | ATGGAGAAGAAGACTTATCCGATTGGTGAAGATTATTATATTCTGTATGAGGAGGTCGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTTAACGAGATCGTCGCCATTAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCCAATGTCCTTAAATCACACTGCTCTTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTCATAGCAACAGTTTTGCGAGAAGTATTGAAGGGGGTTGAATATCTTCATAATCATGGACATATACATCGGGATATCAAAGAGCTGAATCTGATTGGTTCATTATTTGATCCCCCATTTGTGAAGCCTAACTTCATTGTATTCTATGAAATAAGGAATATTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCGGCTTGTCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAACGCACCTCCAGGGCTTGATTATGAGAGGGATAAAAAATTCTCAAAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGGCCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAGGCAAGCCCGATCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTCAAGAGAAAAGAAGAAGATATGCTAGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCTCAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATAAGTGAAATCAGTGAAGTAGGGAGCTCAAATTCCTTATGTGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATAATGAAGAGAATGGCATGCTGCGGAGACAACCCTCCATGAAAGCAAATGACACAGTAGAGGGTAAAAATTCTATCAATGAATCAACAATTATTGGTTCTTCCTCTCAACATTATTCTTCACCCATTGAGAATGGCTCCAGTGAGGAGTTTCGTTTGGAGAGCAGCAAAAGAATTTTGGGGAATACTCCTAATTCTAGCCAACATAAAAGAAGTATTTCTTCTAATACCGCTATTCAACAAGAAATCAGTTCACCACTGAACAGAAGAGAGAGTTATGAGACAGAAAAGAATGGTGCAAATGGCAGTATTGCAATTGGAATGACTTCTCAGGCGGTAGATGATGTACTTTCTGATTCTCATTCTAAAGATCCCAAGTCATCATTAAGTCCAGCAACAAATGACGAGGAACAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACCTCGGAGAGTGTTGATGTAGAAAAGGCAGCTGCATCCCCTATTTTGCAAAAAAGTCACAGCATGCAGGTTGGTAATTCTGAGGTGATTACCTCAAATTCTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCGCAATCGGAGAATTTTCAGCTGATGGCGTAGTTGATGTCTCAGTGGCCCATATAACAGCAACGGAAAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGAAGAAGAAATGTAAGGCAGTAAAGGATGATATGATGAGAGAAGAAGGTAACCTTACAGGTCATTTCCACTGTAGTATTGTTCTTCGGCTTGATATGGTTTTCTTCAAAGCTGTGTTCCTTCTCCTGTTTCAGTATCTGGTTTTGAATTCTGGGACTCCAGTTATTATAGGTCACCACTACCCTCCTCATAAGTCCTTGCTCACTGATAAAGCAGCCCTCCTTGCCTTCAGGAAGTGCATCATACACGACCCCACTTCCACTCTAGCTAACTGGATTGAGGCTATTGATGTATGCAACTTCACTGGTGTTGCTTGTGACCGACACCGTCATCGGGTATCAAAGCTCAGCTTGATTGATGTTGGACTTGTGGGAAAGATTCCACCCTTCCTCTCCAATCTCACGGGTCTTCGAATTCTGGATATTGTTAACAGTTATCTTTTTGGGGAAATTCCTTCTGAACTTTTTTCTCTTCGAAATCTTCACCGCCTTCGCCTCGACAGCAACAGTTTGGAAGGTCCCATACCAACTTCCCTTGCTAGTTTGTCCAGGCTTACTGTAATAAGTCTTAGGGAGAACAGGCTAAATGGAACAGTTCCACCTTCTCTTTTTTCTAATTGCACGTCGTTGCTTAATGTAGACCTTTCCAACAACTTCTTAACAGGAAGAATTCCAGAAGAAATTGGAAATTGTCCAAAGCTGTGGAATCTCAATCTGTACAACAACCAGTTCAGTGGAGATCTTCCTCTTTCTTTAAGAAACACTTCGCTCTATAACTTGGATGTCGAATATAATCATCTTTCTGGCGAACTGCCTGCAGTGCTTGTAGAAAACCTGCCTTCACTTAGCTTCCTTCATTTATCAAATAATGATATGGTAAGCCACGATGGAAATACCAATCTTGAACCGTTCATTACTTCTCTTAGAAACTGCAGTAGTTTAGAGGAGCTTGAATTGGCTGGGATGGGGCTTGGAGGGAGGCTGCCCAGTTCTATTGGTCATCTGGGTGTCAATTTCTCAGTTCTGTCTTTGCAGGAAAACCAGATATTTGGATCAATTCCTCCAAATTTAGCCAAGCTTTCCAAACTTGCAGGGCTGAATTTGACATCAAATCTACTAAACGGAACAATTCCTGCAGAGATAAGCAGGTTGTCAAAATTGGAGCAGCTTTTCTTATCACACAACCTCTTCACTTCAGACATTCCAGAAGCATTAGGCGAGTTGCCACATCTTGGATTGTTGGATCTATCTCACAACCAACTTTCAGGAGAAATCCCAGAAAGTATTGGAAATTTAACTCAGATGATTTATTTGTTTCTCAACCACAACCTCTTGTCTGGAACAATACCTTTAGCGTTGGTAAAGTGCACAGGTCTACAAAAGCTGGACTTATCTTTCAACATGTTATCTGGAAGTATTCCTCGAGAGATCTTAGGCTTGCAAGAGATAAGAATTTTTATCAACCTTTCTCATAACAATTTTCAAGGAAACCTGCCCATTGAGCTTAGCAAGCTGAAAAATGTTCAAGAGATGGACCTTTCATCCAATAACCTCACTGGAAGCATCTTCCCTCAGATATCAAGTTGCATTGCACTGAGGTTACTAAATTTTTCAACTAATTCCCTCCAAGGTCATCTTCCAGATTCTCTAGGTGAACTCGAGAACCTTGAATCATTTGACATTTCAAAAAACCAATTGTCAGGCATGATTCCAGCCAGTCTAGGTAAGCTCCAATCTCTCAGTTACCTGAATCTTTCATTCAATAACTTCCAAGGAATGATTCCAAGAGAGGGATTTTTCAAATCATCCACACCTCTCTCATTTTTGAACAATCCACTCCTTTGTGGGACAATTCCTGGAATGCCAGCCTGTTCTGGCAAGAGAAATCGGTTTCAATCACCTGTATTCTTGACTATATTCATTTTAATCATATGCATATCATCTTTCTTATCAACAATATGCTGTGGGATTGCTTGTCAACGTCTAAAAGCAATTGTTTCAGCACGAAATAGTGAGTCATCAAGGAGATCAAAGATGCCAGATTTTATGCACAATTTTCCAAGAATAACAAGCAGGCAACTATCAGAGGCCACTGGAGGTTTTGATGAACGGAGACTAATTGGTTCAGGCAGCTATGGACAAGTCTATAAAGGCGTTCTTCCAGATGGAACAACTGTAGCTGTTAAGGTTTTGCATACACAATCTGGAAACTCCACAAAGAGTTTTAACAGAGAATGCGAAGTTTTGAAGCGAATTCGCCACAGAAACCTTATAAGAATTATAACAGCTTGTAGTCTTCCGGATTTTAAAGCTCTAGTTCTACCATATATGGCAAATGGAAGCTTGGATAACCATCTATATCGATGTTCACCTACCAGCTCGGCTTCGGGTTCTTCAGATTTAAACCTTATTGAGAGGGTGAATATATGCAGTGATATAGCTGAAGGAATGGCATACCTGCATCATCATTCTCCAGTCAGAGTCATACACTGTGATTTAAAGCCAAGTAATGTACTTCTAAAGGATGACATGACAGCCCTTGTTTCTGACTTTGGGATCTCAAGGCTAATGACCCCTGGAATTGGAAGCGCAACTGTTGAAAACATGGGAAAGTCAACTGCAAACATGTTAACTGGATCAATTGGATATATTGCACCAGAGTACGGATTTGGTTCTACAGCCTCCATGAAAGGAGACGTTTACAGCTTCGGCGTGCTAGTTCTAGAGATGGTAACAAGAAAAAGGCCAATAGACGACATGTTTGTTGAAGGGCTAAGTTTACATAAGTGGGTGAAGAGTCATTACTACGGCAGAGTAGAAAAAGTAGTGGATTATTCTCTACAGAGAGCTTCGAGAGATGAATCACCTGAAATGAAGAAAATGTGGGAAGTGGCAATCCGAGAGCTAATCGAATTAGGTTTGCTCTGCACTCAAGAATCTCCATCCACAAGACCAACAATGCTGGATGCTGCTGATGACTTGGATCGATTGAAGAGATACCTTAATGGTGGCGACACCACAACAACATTTGCTTCATCACTTGGAATTTCGTCCTCCACTCTTGGCGATGACTCCAATTACTCCCCACAAATCGCCGTTGACAGAAACATCTAG | 5196 | 41.03 | MEKKTYPIGEDYYILYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKELNLIGSLFDPPFVKPNFIVFYEIRNILIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKMIASCLVKDPSKRPSASKLLKHSFFRQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEVGSSNSLCALDVQEKKLQGQNSSEISDNEENGMLRRQPSMKANDTVEGKNSINESTIIGSSSQHYSSPIENGSSEEFRLESSKRILGNTPNSSQHKRSISSNTAIQQEISSPLNRRESYETEKNGANGSIAIGMTSQAVDDVLSDSHSKDPKSSLSPATNDEEQDEKAKAPVIQQKGRFKVTSESVDVEKAAASPILQKSHSMQVGNSEVITSNSATPLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQIAIGEFSADGVVDVSVAHITATEKSLLEAAHEREKDLLNEVTELQWRKKKCKAVKDDMMREEGNLTGHFHCSIVLRLDMVFFKAVFLLLFQYLVLNSGTPVIIGHHYPPHKSLLTDKAALLAFRKCIIHDPTSTLANWIEAIDVCNFTGVACDRHRHRVSKLSLIDVGLVGKIPPFLSNLTGLRILDIVNSYLFGEIPSELFSLRNLHRLRLDSNSLEGPIPTSLASLSRLTVISLRENRLNGTVPPSLFSNCTSLLNVDLSNNFLTGRIPEEIGNCPKLWNLNLYNNQFSGDLPLSLRNTSLYNLDVEYNHLSGELPAVLVENLPSLSFLHLSNNDMVSHDGNTNLEPFITSLRNCSSLEELELAGMGLGGRLPSSIGHLGVNFSVLSLQENQIFGSIPPNLAKLSKLAGLNLTSNLLNGTIPAEISRLSKLEQLFLSHNLFTSDIPEALGELPHLGLLDLSHNQLSGEIPESIGNLTQMIYLFLNHNLLSGTIPLALVKCTGLQKLDLSFNMLSGSIPREILGLQEIRIFINLSHNNFQGNLPIELSKLKNVQEMDLSSNNLTGSIFPQISSCIALRLLNFSTNSLQGHLPDSLGELENLESFDISKNQLSGMIPASLGKLQSLSYLNLSFNNFQGMIPREGFFKSSTPLSFLNNPLLCGTIPGMPACSGKRNRFQSPVFLTIFILIICISSFLSTICCGIACQRLKAIVSARNSESSRRSKMPDFMHNFPRITSRQLSEATGGFDERRLIGSGSYGQVYKGVLPDGTTVAVKVLHTQSGNSTKSFNRECEVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLDNHLYRCSPTSSASGSSDLNLIERVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLKDDMTALVSDFGISRLMTPGIGSATVENMGKSTANMLTGSIGYIAPEYGFGSTASMKGDVYSFGVLVLEMVTRKRPIDDMFVEGLSLHKWVKSHYYGRVEKVVDYSLQRASRDESPEMKKMWEVAIRELIELGLLCTQESPSTRPTMLDAADDLDRLKRYLNGGDTTTTFASSLGISSSTLGDDSNYSPQIAVDRNI | 1731 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26876990 | 26895646 | + | ClCG10G012850.2 | Cla10g01223 | 282882 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01223 | 1731 | SMART | LRR_typ_2 | 1078 | 1101 | IPR003591 | - | |
Cla10g01223 | 1731 | SMART | LRR_typ_2 | 876 | 900 | IPR003591 | - | |
Cla10g01223 | 1731 | SMART | LRR_typ_2 | 1271 | 1295 | IPR003591 | - | |
Cla10g01223 | 1731 | SMART | LRR_typ_2 | 1102 | 1126 | IPR003591 | - | |
Cla10g01223 | 1731 | SMART | LRR_typ_2 | 1150 | 1174 | IPR003591 | - | |
Cla10g01223 | 1731 | SMART | LRR_typ_2 | 1247 | 1270 | IPR003591 | - | |
Cla10g01223 | 1731 | SMART | LRR_typ_2 | 1199 | 1223 | IPR003591 | - | |
Cla10g01223 | 1731 | Pfam | Protein kinase domain | 1396 | 1684 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01223 | 1731 | Pfam | Protein kinase domain | 163 | 293 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01223 | 1731 | Pfam | Protein kinase domain | 15 | 143 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01223 | 1731 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1401 | 1423 | IPR017441 | GO:0005524 | |
Cla10g01223 | 1731 | Gene3D | Transferase(Phosphotransferase) domain 1 | 101 | 308 | - | - | |
Cla10g01223 | 1731 | ProSiteProfiles | Protein kinase domain profile. | 1395 | 1695 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01223 | 1731 | Gene3D | Ribonuclease Inhibitor | 951 | 1326 | IPR032675 | - | |
Cla10g01223 | 1731 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1522 | 1534 | IPR008271 | GO:0004672|GO:0006468 | |
Cla10g01223 | 1731 | CDD | STKc_IRAK | 1401 | 1691 | - | - | |
Cla10g01223 | 1731 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 89 | - | - | |
Cla10g01223 | 1731 | CDD | STKc_OSR1_SPAK | 11 | 293 | - | - | |
Cla10g01223 | 1731 | ProSitePatterns | Protein kinases ATP-binding region signature. | 19 | 42 | IPR017441 | GO:0005524 | |
Cla10g01223 | 1731 | MobiDBLite | consensus disorder prediction | 396 | 549 | - | - | |
Cla10g01223 | 1731 | MobiDBLite | consensus disorder prediction | 422 | 454 | - | - | |
Cla10g01223 | 1731 | MobiDBLite | consensus disorder prediction | 463 | 493 | - | - | |
Cla10g01223 | 1731 | SMART | serkin_6 | 1395 | 1695 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01223 | 1731 | SMART | serkin_6 | 13 | 293 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01223 | 1731 | Pfam | Leucine rich repeat | 877 | 938 | IPR001611 | GO:0005515 | |
Cla10g01223 | 1731 | Pfam | Leucine rich repeat | 1056 | 1115 | IPR001611 | GO:0005515 | |
Cla10g01223 | 1731 | PANTHER | OS04G0122200 PROTEIN | 752 | 1698 | - | - | |
Cla10g01223 | 1731 | SUPERFAMILY | Protein kinase-like (PK-like) | 1370 | 1688 | IPR011009 | - | |
Cla10g01223 | 1731 | SUPERFAMILY | L domain-like | 763 | 1029 | - | - | |
Cla10g01223 | 1731 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1471 | 1702 | - | - | |
Cla10g01223 | 1731 | Coils | Coil | 675 | 695 | - | - | |
Cla10g01223 | 1731 | Gene3D | Phosphorylase Kinase; domain 1 | 1356 | 1470 | - | - | |
Cla10g01223 | 1731 | Pfam | Leucine rich repeat N-terminal domain | 763 | 801 | IPR013210 | - | |
Cla10g01223 | 1731 | Gene3D | Ribonuclease Inhibitor | 877 | 950 | IPR032675 | - | |
Cla10g01223 | 1731 | Gene3D | Ribonuclease Inhibitor | 763 | 876 | IPR032675 | - | |
Cla10g01223 | 1731 | PANTHER | OS06G0186100 PROTEIN | 752 | 1698 | - | - | |
Cla10g01223 | 1731 | SUPERFAMILY | L domain-like | 1056 | 1310 | - | - | |
Cla10g01223 | 1731 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 294 | IPR011009 | - | |
Cla10g01223 | 1731 | ProSiteProfiles | Protein kinase domain profile. | 13 | 293 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01223 | 1731 | MobiDBLite | consensus disorder prediction | 502 | 521 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00470 | Cla-Chr5:4284570 | Cla10g01223 | Cla-Chr10:26876990 | 5.67E-10 | dispersed | |
Cla06g01253 | Cla-Chr6:25754158 | Cla10g01223 | Cla-Chr10:26876990 | 0 | dispersed | |
Cla06g01254 | Cla-Chr6:25771763 | Cla10g01223 | Cla-Chr10:26876990 | 9.28E-07 | dispersed | |
Cla09g01858 | Cla-Chr9:36281233 | Cla10g01223 | Cla-Chr10:26876990 | 1.47E-13 | dispersed | |
Cla10g00086 | Cla-Chr10:867478 | Cla10g01223 | Cla-Chr10:26876990 | 1.71E-128 | dispersed | |
Cla10g01223 | Cla-Chr10:26876990 | Cla10g02084 | Cla-Chr10:36524762 | 6.46E-07 | dispersed | |
Cla11g01746 | Cla-Chr11:31039965 | Cla10g01223 | Cla-Chr10:26876990 | 8.91E-13 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80861 | PF00069 | Pkinase | 1.70E-41 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01223 | - | - | csv:101211325 | 1885.92 |