Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01233 | ATGCTGCTGCGAAGGGAGCTGAACAGGAAAAGGGAGGAGAGAGAAATGAAGGGAAGGAGAGTAAGCAAAGCGGGAGCTCTGACCACCAGCTTATCGAATCCACCATCGTCAATCCCCTTATCATATTCTGGATTAAGATTTCATTTCGTTTCAAAAAGAGAGGGGAAAAAGGAGAGGAACAATAAAATGGCTGCTGGAGGGTCTGGTTCTGGGCAGCCACAATTTATTTTGAGGGCTGGAGATGAGAGTTTTTCGCACGCGCCGTTGATCGAGAACCCGGAAACTGATCAGATTGTTGTTCCTGATAAGAAAAGCTGGAAGAACCTTTTTGCATACATGGGCCCGGGGTTTCTTGTTTCTATTGCATATATTGATCCTGGGAATTTTGAGACTGATCTACAATCTGGAGCACAGTACAAGTATGGGTTGCTTTGGATCATATTAGTGGCTTCCTTTGCTGCCCTCATCATTCAGTCCTTAGCAGCCAATCTAGGGGTCGTCACAGGAAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCTAAGGCGCAAAATTTCGTCCTCTGGATCCTTGCTGAAATTGCAATTGTTGCATGTGATATTCCCGAAGTTATAGGAACTGCTTTTGCATTGAATATGCTCTTCAGCATTCCTGTTTGGTGTGGCGTTCTTCTGACAGGGCTTAGTACACTATTACTTCTTGCACTGCAGCAATATGGGATTAGAAAGCTTGAATTCTTGATTGCTTTTCTCGTATTGACAATTGCGATTTGCTTCTTCCTGGAGCTGGGCTATGCAAAGCCTGACGTTGGAGAAATTTTTTATGGGCTATTTGTCCCTCAATTGAAAGGAAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTGTTTCTTCATTCAGCACTGGTGCTCTCTAGGAAAATACCCCGATCCCTTTCTGGCATCAAGGAAGCTTGCAGATTTTACATGATAGAGAGTGGCTTTGCTCTTATGGTGGCCTTCCTCATTAATGTGTCAGTCATTTCAGTTAGTGGTGCAGTTTGCAATGCCCCAGATCTAAATAAGGAGGACCAAATGAGCTGCAATGATTTGGACTTGAATAAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTGTTGGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCAGGACAGTATGTTATGCAGGGGTTTCTCGATTTGAAACTGACGCCGTGGATCAGAAACTTTTTAACTCGAAGCTTAGCAATTGTTCCTAGTTTGATTGTCGCAATCATTGGTGGGTCTTCTGGGGCTGGGAAGCTGATCATTATTGCGTCGATTACAGTATTGACATGGATTATTGGCTTCCTCATCATGGCTATAAATATATACTACCTCATGAGCCGTTTCATCCACATGCTCCTTCATAACGATCTACACCTCGCAGCAGTTGTCTTCATAGGGATACTTGGATTTTCAGGCGTGGCACTATATTTAGCTGGAATTGCTTATCTGGTTTTGAGAAAGAGCAAGGAGATCACTCATCTCTTAGCACTAACAACAGATGAAAGTAGAAGACTGAGCAACGAGCCGAGTAAGACATCGGGATATAGTCTCCCGAACGAAGATATAGTAAGCATGCAGTTGCCTCAACGAGTTAGAACTGCCAATGATGTAAACTGA | 1728 | 43.17 | MLLRRELNRKREEREMKGRRVSKAGALTTSLSNPPSSIPLSYSGLRFHFVSKREGKKERNNKMAAGGSGSGQPQFILRAGDESFSHAPLIENPETDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYGLLWIILVASFAALIIQSLAANLGVVTGKHLAEHCKAEYPKAQNFVLWILAEIAIVACDIPEVIGTAFALNMLFSIPVWCGVLLTGLSTLLLLALQQYGIRKLEFLIAFLVLTIAICFFLELGYAKPDVGEIFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSLSGIKEACRFYMIESGFALMVAFLINVSVISVSGAVCNAPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLTPWIRNFLTRSLAIVPSLIVAIIGGSSGAGKLIIIASITVLTWIIGFLIMAINIYYLMSRFIHMLLHNDLHLAAVVFIGILGFSGVALYLAGIAYLVLRKSKEITHLLALTTDESRRLSNEPSKTSGYSLPNEDIVSMQLPQRVRTANDVN | 575 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 27084385 | 27090182 | + | ClCG10G012960.1 | Cla10g01233 | 282892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01233 | 575 | PRINTS | Natural resistance-associated macrophage protein signature | 429 | 446 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | PRINTS | Natural resistance-associated macrophage protein signature | 291 | 314 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | PRINTS | Natural resistance-associated macrophage protein signature | 241 | 262 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | PRINTS | Natural resistance-associated macrophage protein signature | 188 | 214 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | PRINTS | Natural resistance-associated macrophage protein signature | 216 | 235 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | PRINTS | Natural resistance-associated macrophage protein signature | 401 | 420 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | TIGRFAM | nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 108 | 476 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cla10g01233 | 575 | Pfam | Natural resistance-associated macrophage protein | 129 | 476 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cla10g01233 | 575 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 461 | 571 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | PANTHER | METAL TRANSPORTER NRAMP1 | 461 | 571 | - | - | |
Cla10g01233 | 575 | PANTHER | METAL TRANSPORTER NRAMP1 | 70 | 462 | - | - | |
Cla10g01233 | 575 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 70 | 462 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cla10g01233 | 575 | Hamap | Divalent metal cation transporter MntH [mntH]. | 94 | 485 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g00615 | Cla-Chr8:18076250 | Cla10g01233 | Cla-Chr10:27084385 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01233 | K21398 | - | csv:101209649 | 921.768 |