Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01236 ATGCTGATCGATACCTCTGCAATTTCCGGCGAAATTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTCCTGAAGCTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTCCTTGATTTTGACAGCCTTAAAGCAGCCATTTTGGGCTGTCATGGTGTTTTCCACACCGCGTCTCCTGTGACCGATGACCATGACAAAGTGGAACAAGCCATAATTGGAACAAAGAACGTCATGACTGCTGCCGCTGAAGCAAACGTTCAACGTGTGGTCTTCACGTCGTCGATCGGGACCGTTTATATGAACCCTAACCGACACCCAGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTACTGCTATGCAAAGACAATGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAGAGGAGTTGATCTTGTAGTTGTAAATCCAATGTTGGTGTTGGGACCTTTGTTGCAAGAAGGTGTAAATGCTAGTGTAGTTCACATAATGAAGTATTTAACGGGATCAGCAAAGACATATGTAAATGCAGTTCAAGGTTATGTTGATGTTAAGGATGTTGCAAAAGCCCATATTTTGGTTTATGAAACTCCTTCCGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAAAAACTTCTTCCCTCAATATCCTCTTCCTACCAAGTGTTCTGATGAGATAAATCCCAGAAAGAAACCTTACAAGTACACAGTTGAGAAGCTAAAGTCATTAGGAATGGAATTCACACCAATCAAACAATGCATATATGAAACTGTAAAGAGCCTACAAGACAAGGGTCATCTTCCACCTCCTTCCCAACTTCAACATTATTGA 993 42.5 MLIDTSAISGEIVCVTGAGGFIASWLLKLLLEKGYTVRGTVRNPDDQKNAHLKNLEGAKERLSLFSADLLDFDSLKAAILGCHGVFHTASPVTDDHDKVEQAIIGTKNVMTAAAEANVQRVVFTSSIGTVYMNPNRHPDTVVDESCWSDLEFCKNTKNWYCYAKTMAEQAAWEVAKERGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHILVYETPSASGRYICVESMLHRGELVDILKNFFPQYPLPTKCSDEINPRKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQDKGHLPPPSQLQHY 330
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 27110903 27113357 - ClCG10G012985.1 Cla10g01236 282895
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01236 330 CDD FR_SDR_e 13 298 - -
Cla10g01236 330 PANTHER CINNAMOYL-COA REDUCTASE 9 324 - -
Cla10g01236 330 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Cla10g01236 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 324 - -
Cla10g01236 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 315 IPR036291 -
Cla10g01236 330 Gene3D - 3 329 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02233 Cla-Chr2:37473053 Cla10g01236 Cla-Chr10:27110903 1.31E-105 dispersed
Cla02g02239 Cla-Chr2:37538466 Cla10g01236 Cla-Chr10:27110903 1.16E-98 dispersed
Cla03g00031 Cla-Chr3:320249 Cla10g01236 Cla-Chr10:27110903 3.61E-79 dispersed
Cla10g00724 Cla-Chr10:11568652 Cla10g01236 Cla-Chr10:27110903 4.70E-72 dispersed
Cla10g01236 Cla-Chr10:27110903 Cla10g01238 Cla-Chr10:27128055 0 dispersed
Cla10g01234 Cla-Chr10:27099940 Cla10g01236 Cla-Chr10:27110903 3.05E-146 proximal
Cla10g01236 Cla-Chr10:27110903 Cla10g01237 Cla-Chr10:27115404 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01236 K09753 - csv:116401652 615.535