Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01237 ATGCCGATTGATACCTCTGCAGTCTCCGGCCAAATTGTGTGTGTCACCGGCGCCGGCGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACCGTCAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAAGAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTCCTTGATTTTGACAGCCTCAAAGCAGCCATTATGGGTTGTCATGGTGTTTTCCACACTGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAACGTCATGACCGCTGCCGCTGAAGCAAACGTCCGACGAGTGGTGTTCACGTCATCGATCGGCACCGTCTATATGAACCCTAACCGAAGCCCCGACGCGGTAGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAGTGGCAGAACAAACAGCATGGGAAGTGGCAAAAGAAAAAGAAGTGGATCTTGTTGTGGTGAATCCAATGTTGGTATTGGGGCCTTTGTTGCAAGAAGGTGTGAATGCAAGTGTAGTTCATATAATGAAATATTTGACCGGATCAGTAAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTTAAGGATGTTGCAAAAGCACATGTTTTGGTTTATGAAACTCCTTCAGCTTCAGGCAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATCCTTGCAAACCTCTTTCCTGAATATTCTGTTCCCACTAAGTGCTCTGATGAGGTGAATCCCAAGAAGAAACCTTACAAATACACAGTTGCGAAGTTAAAGTCATTGGGAATGGAATTCACACCGATCAAACAATGCATATATGAAACTGTGAAGAGCTTGCAAGAGAAGGGTCATCTTCCACTTCCCTCCAAACTTCAACGCTGA 990 44.44 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGTVYMNPNRSPDAVVDESCWSDLEFCKNTKNWYCYAKTVAEQTAWEVAKEKEVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSVKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILANLFPEYSVPTKCSDEVNPKKKPYKYTVAKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSKLQR 329
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 27115404 27117647 - ClCG10G012990.1 Cla10g01237 282896
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01237 329 CDD FR_SDR_e 13 298 - -
Cla10g01237 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 324 - -
Cla10g01237 329 Gene3D - 3 329 - -
Cla10g01237 329 PANTHER CINNAMOYL-COA REDUCTASE 8 324 - -
Cla10g01237 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 316 IPR036291 -
Cla10g01237 329 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g00296 Cla-Chr9:2853720 Cla10g01237 Cla-Chr10:27115404 0 dispersed
Cla10g01234 Cla-Chr10:27099940 Cla10g01237 Cla-Chr10:27115404 7.67E-113 dispersed
Cla10g01237 Cla-Chr10:27115404 Cla11g01855 Cla-Chr11:32080129 3.10E-88 dispersed
Cla10g01348 Cla-Chr10:28481777 Cla10g01237 Cla-Chr10:27115404 3.35E-38 dispersed
Cla10g01236 Cla-Chr10:27110903 Cla10g01237 Cla-Chr10:27115404 0 tandem
Cla10g01237 Cla-Chr10:27115404 Cla10g01238 Cla-Chr10:27128055 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01237 K09753 - csv:116401668 608.216