Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla10g01237 | ATGCCGATTGATACCTCTGCAGTCTCCGGCCAAATTGTGTGTGTCACCGGCGCCGGCGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACCGTCAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAAGAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTCCTTGATTTTGACAGCCTCAAAGCAGCCATTATGGGTTGTCATGGTGTTTTCCACACTGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAACGTCATGACCGCTGCCGCTGAAGCAAACGTCCGACGAGTGGTGTTCACGTCATCGATCGGCACCGTCTATATGAACCCTAACCGAAGCCCCGACGCGGTAGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAGTGGCAGAACAAACAGCATGGGAAGTGGCAAAAGAAAAAGAAGTGGATCTTGTTGTGGTGAATCCAATGTTGGTATTGGGGCCTTTGTTGCAAGAAGGTGTGAATGCAAGTGTAGTTCATATAATGAAATATTTGACCGGATCAGTAAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTTAAGGATGTTGCAAAAGCACATGTTTTGGTTTATGAAACTCCTTCAGCTTCAGGCAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATCCTTGCAAACCTCTTTCCTGAATATTCTGTTCCCACTAAGTGCTCTGATGAGGTGAATCCCAAGAAGAAACCTTACAAATACACAGTTGCGAAGTTAAAGTCATTGGGAATGGAATTCACACCGATCAAACAATGCATATATGAAACTGTGAAGAGCTTGCAAGAGAAGGGTCATCTTCCACTTCCCTCCAAACTTCAACGCTGA | 990 | 44.44 | MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGTVYMNPNRSPDAVVDESCWSDLEFCKNTKNWYCYAKTVAEQTAWEVAKEKEVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSVKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILANLFPEYSVPTKCSDEVNPKKKPYKYTVAKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSKLQR | 329 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 27115404 | 27117647 | - | ClCG10G012990.1 | Cla10g01237 | 282896 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla10g01237 | 329 | CDD | FR_SDR_e | 13 | 298 | - | - | |
| Cla10g01237 | 329 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 8 | 324 | - | - | |
| Cla10g01237 | 329 | Gene3D | - | 3 | 329 | - | - | |
| Cla10g01237 | 329 | PANTHER | CINNAMOYL-COA REDUCTASE | 8 | 324 | - | - | |
| Cla10g01237 | 329 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 6 | 316 | IPR036291 | - | |
| Cla10g01237 | 329 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 243 | IPR001509 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla09g00296 | Cla-Chr9:2853720 | Cla10g01237 | Cla-Chr10:27115404 | 0 | dispersed | |
| Cla10g01234 | Cla-Chr10:27099940 | Cla10g01237 | Cla-Chr10:27115404 | 7.67E-113 | dispersed | |
| Cla10g01237 | Cla-Chr10:27115404 | Cla11g01855 | Cla-Chr11:32080129 | 3.10E-88 | dispersed | |
| Cla10g01348 | Cla-Chr10:28481777 | Cla10g01237 | Cla-Chr10:27115404 | 3.35E-38 | dispersed | |
| Cla10g01236 | Cla-Chr10:27110903 | Cla10g01237 | Cla-Chr10:27115404 | 0 | tandem | |
| Cla10g01237 | Cla-Chr10:27115404 | Cla10g01238 | Cla-Chr10:27128055 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla10g01237 | K09753 | - | csv:116401668 | 608.216 |