Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01257 | ATGGGGGCGATTTTGGCGGTTTCAGTCGTTCAAACGCTGCTATTTTTGGCTTTCTTCTACTTGGCGGCTTCCTATACTGATTCCCACGATTCGTCGGTTCTTCAATCCTTGAAAGATGGATGGCAAAATACACCACCAAGCTGGGGAACAACAAATGATCCATGTGGAGCTCCCTGGGAAGGAGTGATTTGCAAGAACTCAAGAGTAGTTGCATTGAAATTATCAAGTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTTACTGAACTGAGATCATTGGACCTTGCAGCCAATCGAGACCTCATTGGTTCAATCTCTTCAGCTCTAGGGAGTTTGTTGAAATTAGAGACCTTGATCCTTTCGACGTGTGGATTTAGTGGCAATATTCCGGAAGAATTGGGCAATCTTACTGAGTTAACCTTCTTGTCTTTATATTCCAACAACTTCACTGGTACTATACCGGCAACTCTGGGAAAACTCTCCAATCTATACTGGCTAGACCTGGCAGATAATCAGTTGACTGGTGCTCTCCCAGTTTCCACTTCCGGATCTTCGGGTTTAGATCGACTTTTTAAGGCTAAACATTTTCATTTCAGCAAAAACCAGTTATCAGGTACCATTCCACCTGAACTTTTTCACTCTGAGATGGTATTATTACACATATTATTTGATGGAAATAATTTTTCTGGGAGTATCCCACCAACATTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTTGATCGAAATTCTTTAACAGGAAGTGTCCCATCCACTCTAAGCAACCTAATAAATGTGAATGAATTGCATTTAGCCAACAATAAGCTGACAGGTCCACTACCAAACTTAACTCAAATGAGTTCACTAAATTACGTGGATCTTAGTAACAACTCATTTAGCTCATCAATAGCTCCGGAATGGTTCTCAAATCTACAATCTCTCACCACTCTTATTGTTGAATATGGATCAATACGGGGAAATCTGCCAGAAGGAATCTTTAGCTTACCACGTATACAACAAGTAAAACTGAAGAATAATGCATTTAGTGGGACATTATATATGGGTGACAGCATTGGCCAACTGTTGCAGCTAGTCGATTTGCAAAATAACAATATTTCCTCAGTTACCTCTTCGGGATATACTAACGCTTTGATGCTGACAGGAAATCCTGTGTGTGATGCTAATTTCCTCTCAAATACAAACTATTGCCAGCTTCAACAGCAACAAGCAAAACCTTATACTACCAGCCTTGTCAACTGTGGCAGTAAGTCATGTCCTGATGATGAGAAGCTGAACCCTCGGAGTTGTGAGTGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGGACCCTCTTTCCGGGAATTGTCCAATATAACTCTGTTTCACTTATTGGAAATGAGCCTTTTGGAAAAATTCAACCTAACGGCTTCTATTCGAAACCCTTTCTTTAATGCTGACGATTATCTTCAGATACAGCTTGCACTTTTTCCAGCCAATGATAAGTATTTCAACAGGGAAGACATTCAGTGGATTGGTTTTGATTTGCACAGTCAAAATTACAAACCTCCCGACAAGTTTGGGCCATATTACTTCTTTGCGTCTCCTTATCCTTTTTCAGACATCGATGAGGGATCAACTTCAACCAACACTGGGGTGATAATTGGAATAGCTGTTGGCTGTGCCTTTCTTGTTCTCTGCCTCATTGGAATTGGAACATATGCAATTCAACAAAAGAGACGTGCAGAAAAGGCCAAGCCAAATGCTTTCTGGGTGCCAAGTGGAAACGATAGCGGAAGCGCACCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAAAAATGCACAGATAATTTCTCCACCAGTAATGTGATAGGATCGGGAGGATTTGGCATGAGTTGTTTTTGCATTGGCATTGCCGCATTGTCATTGGTACAGGTATACAGAGGAACACTGGTGGATGGAAAAGTAGTTGCAATCAAAAGAGCTCAACAAGGATCAATGCAGGGTGGTCTCGAGTTCAAGACGGAAATTGAGCTGCTTTCACGAGTTCATCACAAGAATCTTCTAGGCCTAGTGGGATTTTGTTCCGAACAAGGAGAACAGATTCTTGTTTATGAGTTCATGCCTAATGGGACACTTAGACAGAGCCTAGCTGGAAAATGTGGTATTTATCTTGATTGGAAGAGAAGGCTTCGTATCGCGCTGGGGTCGGCCAGAGGACTGACTTACTTACACGAGCTTGCTAATCCTCCCATAATTCATAGAGATGTTAAGTCCACCAACATTTTACTAGATGAACGTCTAAATGCAAAGGTTGCTGATTTTGGCTTGTCCAAGCTTGTCTCAGACAGTGTAAAGGGACATGTTTCTACTCAAGTCAAAGGCACATTGGGTTATTTGGATCCTGAATATTACATGAGTCAACAATTGACGGAGAAAAGTGACGTGTACAGTTTTGGAGTAGTTATGTTGGAATTACTAACTGCTAAGCTGCCAATTGAAAAAGGGAAGTACATAGTTCGCGAGGTACGTATGTCGATGAATAAGAGTGATGAAGAATATTACGGTTTAAAGCACATAATAGATGCAGCCATAATCGATAATACGACGAATCTTATCGGGTTTGGAAAGTTCTTAGAGTTAGCCATGCAATGTGTTGAAGAAGCAGCCGCAGACCGGCCCACAATGAGTGAAGTGGTTAAAACAATTGAAAACATTTTGCAGAATGATGGAATAAATACAACCTCAACATCAGCATCCTCATCTGCCACAGACTTCGGGACTTCCAAAACTGCTTCTAGACATCCTTATAATGATGCTTTACAGAAAGAGAGTGTCAACAAGAACAGCCAATGA | 2877 | 41.29 | MGAILAVSVVQTLLFLAFFYLAASYTDSHDSSVLQSLKDGWQNTPPSWGTTNDPCGAPWEGVICKNSRVVALKLSSMGLKGKLGGDIGGLTELRSLDLAANRDLIGSISSALGSLLKLETLILSTCGFSGNIPEELGNLTELTFLSLYSNNFTGTIPATLGKLSNLYWLDLADNQLTGALPVSTSGSSGLDRLFKAKHFHFSKNQLSGTIPPELFHSEMVLLHILFDGNNFSGSIPPTLGLVKTLEVLRLDRNSLTGSVPSTLSNLINVNELHLANNKLTGPLPNLTQMSSLNYVDLSNNSFSSSIAPEWFSNLQSLTTLIVEYGSIRGNLPEGIFSLPRIQQVKLKNNAFSGTLYMGDSIGQLLQLVDLQNNNISSVTSSGYTNALMLTGNPVCDANFLSNTNYCQLQQQQAKPYTTSLVNCGSKSCPDDEKLNPRSCECAYPYEGTLYFRGPSFRELSNITLFHLLEMSLLEKFNLTASIRNPFFNADDYLQIQLALFPANDKYFNREDIQWIGFDLHSQNYKPPDKFGPYYFFASPYPFSDIDEGSTSTNTGVIIGIAVGCAFLVLCLIGIGTYAIQQKRRAEKAKPNAFWVPSGNDSGSAPQLKGARWFSYDELKKCTDNFSTSNVIGSGGFGMSCFCIGIAALSLVQVYRGTLVDGKVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCSEQGEQILVYEFMPNGTLRQSLAGKCGIYLDWKRRLRIALGSARGLTYLHELANPPIIHRDVKSTNILLDERLNAKVADFGLSKLVSDSVKGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYIVREVRMSMNKSDEEYYGLKHIIDAAIIDNTTNLIGFGKFLELAMQCVEEAAADRPTMSEVVKTIENILQNDGINTTSTSASSSATDFGTSKTASRHPYNDALQKESVNKNSQ | 958 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 27428139 | 27435314 | - | ClCG10G013200.2 | Cla10g01257 | 282916 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01257 | 958 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 11 | 943 | - | - | |
Cla10g01257 | 958 | PANTHER | LRR RECEPTOR-LIKE KINASE | 11 | 943 | - | - | |
Cla10g01257 | 958 | Gene3D | Ribonuclease Inhibitor | 27 | 221 | IPR032675 | - | |
Cla10g01257 | 958 | Pfam | Leucine rich repeat | 291 | 350 | IPR001611 | GO:0005515 | |
Cla10g01257 | 958 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 759 | 771 | IPR008271 | GO:0004672|GO:0006468 | |
Cla10g01257 | 958 | MobiDBLite | consensus disorder prediction | 921 | 958 | - | - | |
Cla10g01257 | 958 | Gene3D | Ribonuclease Inhibitor | 222 | 285 | IPR032675 | - | |
Cla10g01257 | 958 | ProSiteProfiles | Protein kinase domain profile. | 625 | 914 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01257 | 958 | SUPERFAMILY | Protein kinase-like (PK-like) | 610 | 925 | IPR011009 | - | |
Cla10g01257 | 958 | SMART | serkin_6 | 625 | 893 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01257 | 958 | Gene3D | Transferase(Phosphotransferase) domain 1 | 715 | 940 | - | - | |
Cla10g01257 | 958 | SMART | LRR_typ_2 | 289 | 313 | IPR003591 | - | |
Cla10g01257 | 958 | SMART | LRR_typ_2 | 139 | 162 | IPR003591 | - | |
Cla10g01257 | 958 | SMART | LRR_typ_2 | 163 | 187 | IPR003591 | - | |
Cla10g01257 | 958 | SMART | LRR_typ_2 | 361 | 385 | IPR003591 | - | |
Cla10g01257 | 958 | SMART | LRR_typ_2 | 90 | 115 | IPR003591 | - | |
Cla10g01257 | 958 | SMART | LRR_typ_2 | 242 | 265 | IPR003591 | - | |
Cla10g01257 | 958 | SMART | LRR_typ_2 | 314 | 338 | IPR003591 | - | |
Cla10g01257 | 958 | SUPERFAMILY | L domain-like | 39 | 354 | - | - | |
Cla10g01257 | 958 | Gene3D | Phosphorylase Kinase; domain 1 | 597 | 714 | - | - | |
Cla10g01257 | 958 | Pfam | Protein tyrosine and serine/threonine kinase | 652 | 909 | IPR001245 | GO:0004672|GO:0006468 | |
Cla10g01257 | 958 | Gene3D | Ribonuclease Inhibitor | 286 | 430 | IPR032675 | - | |
Cla10g01257 | 958 | CDD | STKc_IRAK | 631 | 913 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00002 | Cla-Chr2:51609 | Cla10g01257 | Cla-Chr10:27428139 | 0 | dispersed | |
Cla04g00632 | Cla-Chr4:20628995 | Cla10g01257 | Cla-Chr10:27428139 | 4.27E-163 | dispersed | |
Cla09g02204 | Cla-Chr9:39646954 | Cla10g01257 | Cla-Chr10:27428139 | 3.97E-28 | dispersed | |
Cla10g01257 | Cla-Chr10:27428139 | Cla01g01760 | Cla-Chr1:32501800 | 3.84E-31 | dispersed | |
Cla10g01257 | Cla-Chr10:27428139 | Cla10g02161 | Cla-Chr10:37221640 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80864 | PF07714 | PK_Tyr_Ser-Thr | 5.60E-41 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01257 | - | - | bhj:120091485 | 1660.2 |