Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01319 ATGGAGCCACTTGTTGATGGTATGAGTTCTTTACTGAAAACTCAGAACCCGACATCTACATCAAGGAATCTCGATTCATCTCGCCAGCCATCTCCTAAACAGTCTAGGAATGAAGCAACTTCTTCGGCGTCCTACCTTTGGTCTCAAAATTGTGCCAAGAAACCCCTTCGCCATCCAAATGGTTCTTCTGTAAGTAGTAAAAAACATCCTACCAATTTGAACGTGCAGCTTGAAGGTTTAACTGATGTGAAAAATCATACACACGTTTCTAACAAGGGGAAATCCGAGCTAGTAAACCCAACAGATAGTTCACATAAATCAACTGAAAGTTCTTTTCAGAAGAAGGTTCCTTTGGAGGGAGGTGAAGCAGAACCTCTTGTGAAGCATATCATCGATGATTCTAAGGATTGTTGTTCAAGTGGCTCAGAAGAATCTGGAAATCAAGTATTGAACGCATCGAAAGTAGCTGCCACGCAAATAATTGATCAACTAAAGTCTCAGCCAGCTGAAATATCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGTGAATGTGCAAGCAGCATTGAAAAGTCTTGTGAAAGCATCGACATCACAAATTCCCTTGATCTTGACAAAAGCAGGAAAACAAGTGTTTACCGAGGCAGCACTGGCAGTGATATCAGTGATGAAAGCAATTCGAGTAGTTTAAGCAATGCCATGTATAAGCCTCATAAAGCAAATGATACAAGATGGGAAGCAATGCAAGTTGTGAGATCTCATGATGGGATGTTAGGACTTAACCATTTCCGGTTGCTGCGAAGACTGGGATGTGGTGATATTGGCAGTGTCTATCTTTCAGAGTTAACTGGTACCAAAACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACTGAACGCGAGATATTGCAATCTCTGGATCATCCTTTCCTGCCAACTTTGTATACACACTTTGAGACAGAGAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCTGGGGGCGACTTGCATGCGCTTAGGCAGAGACAGCCCGGAAAATTTTTTCCAGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGACGATGGGCACATAATGCTATCTGATTTTGACCTGTCTCTTAGATGCGCAGTCTCCCCGACACTTGTTAAATCATCAAACTCGGGGTTAGAAGCTAAAAGCTCGGGTTACTGTGCTCAGCCTGCCTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACACCTCGCTTCCTAAGCAGACACAGGAAAGAAAAGAAGTCCAAACCGAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCCGAACCCACAAGTGCAAGATCGATGTCCTTCGTTGGTACACATGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCCGTGGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTTTGTTTGGCCGAACTCCGTTCAAGGGGGCTGGGAACCGTGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCTGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCCGAGGTTTGCTTGTAAAAGAACCACAGCATCGTCTCGCTTATAGGCGTGGTGCTACCGAGATCAAGCAACATCCATTCTTCCAGAGCGTGAATTGGGCACTCATCCGCTGTGCCAATCCTCCCGAGGTGCCAAGAGTAGATGTCATTGATTTCTCTTCAAGGATGGAGACACCACACGCACCGGCAGGCGAAAAGATGCCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA 2016 44.79 MEPLVDGMSSLLKTQNPTSTSRNLDSSRQPSPKQSRNEATSSASYLWSQNCAKKPLRHPNGSSVSSKKHPTNLNVQLEGLTDVKNHTHVSNKGKSELVNPTDSSHKSTESSFQKKVPLEGGEAEPLVKHIIDDSKDCCSSGSEESGNQVLNASKVAATQIIDQLKSQPAEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIEKSCESIDITNSLDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCAQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDVIDFSSRMETPHAPAGEKMPGVDVKPSGNYLEIDFF 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28103576 28107226 - ClCG10G013850.1 Cla10g01319 282978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01319 671 SUPERFAMILY Protein kinase-like (PK-like) 254 641 IPR011009 -
Cla10g01319 671 MobiDBLite consensus disorder prediction 9 84 - -
Cla10g01319 671 Gene3D Phosphorylase Kinase; domain 1 277 362 - -
Cla10g01319 671 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 14 671 - -
Cla10g01319 671 CDD STKc_phototropin_like 278 638 - -
Cla10g01319 671 PANTHER FLIPPASE KINASE 1-RELATED 14 671 - -
Cla10g01319 671 SMART serkin_6 279 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01319 671 Pfam Protein kinase domain 280 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01319 671 Pfam Protein kinase domain 512 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01319 671 MobiDBLite consensus disorder prediction 227 251 - -
Cla10g01319 671 Gene3D Transferase(Phosphotransferase) domain 1 363 431 - -
Cla10g01319 671 MobiDBLite consensus disorder prediction 1 119 - -
Cla10g01319 671 ProSiteProfiles Protein kinase domain profile. 279 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01319 671 MobiDBLite consensus disorder prediction 92 114 - -
Cla10g01319 671 Gene3D Transferase(Phosphotransferase) domain 1 510 633 - -
Cla10g01319 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02066 Cla-Chr1:35111622 Cla10g01319 Cla-Chr10:28103576 0 dispersed
Cla02g01047 Cla-Chr2:21465560 Cla10g01319 Cla-Chr10:28103576 6.18E-114 dispersed
Cla04g00118 Cla-Chr4:3421773 Cla10g01319 Cla-Chr10:28103576 0 dispersed
Cla04g00971 Cla-Chr4:24841948 Cla10g01319 Cla-Chr10:28103576 0 dispersed
Cla05g00012 Cla-Chr5:159566 Cla10g01319 Cla-Chr10:28103576 0 dispersed
Cla10g01319 Cla-Chr10:28103576 Cla11g00263 Cla-Chr11:3058151 1.15E-147 dispersed
Cla10g01319 Cla-Chr10:28103576 Cla01g01115 Cla-Chr1:18346000 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80867 PF00069 Pkinase 7.80E-36 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01319 K08286 - csv:101219962 1281.16